CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  MADHURJA 389 AA truncatula medicago single  ***

<R2> analysis for 260222215518854084

---  normal mode 50  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0719
MET 10.0155
ASP 20.0102
LEU 30.0079
ARG 40.0060
GLU 50.0034
SER 60.0096
ILE 70.0128
ALA 80.0126
ASN 90.0106
GLN 100.0129
THR 110.0172
ASN 120.0202
VAL 130.0140
SER 140.0142
LEU 150.0185
SER 160.0178
VAL 170.0124
ALA 180.0099
LYS 190.0128
HIS 200.0146
LEU 210.0057
PHE 220.0033
SER 230.0164
LYS 240.0114
GLU 250.0268
SER 260.0313
ASP 270.0526
ASN 280.0391
ASN 290.0163
ILE 300.0099
VAL 310.0054
PHE 320.0020
SER 330.0055
PRO 340.0080
LEU 350.0076
SER 360.0073
LEU 370.0068
GLN 380.0085
VAL 390.0046
VAL 400.0032
LEU 410.0045
SER 420.0054
ILE 430.0031
ILE 440.0048
ALA 450.0095
SER 460.0096
GLY 470.0103
SER 480.0096
GLU 490.0082
GLY 500.0075
PRO 510.0083
THR 520.0092
GLN 530.0108
GLN 540.0110
GLN 550.0083
LEU 560.0097
PHE 570.0124
ASN 580.0105
PHE 590.0077
LEU 600.0081
GLN 610.0114
PRO 620.0140
LYS 630.0168
SER 640.0186
THR 650.0151
ASP 660.0158
HIS 670.0145
LEU 680.0142
ASN 690.0132
TYR 700.0138
PHE 710.0119
ALA 720.0125
SER 730.0126
GLN 740.0117
LEU 750.0118
VAL 760.0111
SER 770.0134
VAL 780.0118
ILE 790.0118
LEU 800.0119
SER 810.0135
ASP 820.0143
ALA 830.0145
SER 840.0228
PRO 850.0418
ALA 860.0143
GLY 870.0113
GLY 880.0072
PRO 890.0089
LEU 900.0109
LEU 910.0100
SER 920.0092
PHE 930.0080
VAL 940.0077
ASP 950.0034
GLY 960.0067
VAL 970.0084
TRP 980.0079
VAL 990.0097
ASP 1000.0075
GLN 1010.0132
THR 1020.0148
LEU 1030.0166
SER 1040.0179
LEU 1050.0140
GLN 1060.0135
PRO 1070.0139
SER 1080.0135
PHE 1090.0106
GLN 1100.0121
GLN 1110.0122
ILE 1120.0100
VAL 1130.0056
SER 1140.0071
THR 1150.0092
HIS 1160.0098
PHE 1170.0068
LYS 1180.0069
ALA 1190.0041
ALA 1200.0055
LEU 1210.0077
SER 1220.0087
SER 1230.0124
VAL 1240.0076
ASP 1250.0040
PHE 1260.0026
GLN 1270.0065
ASN 1280.0120
LYS 1290.0078
ALA 1300.0111
VAL 1310.0173
GLU 1320.0158
VAL 1330.0128
THR 1340.0170
ASN 1350.0174
GLU 1360.0155
VAL 1370.0153
ASN 1380.0136
SER 1390.0114
TRP 1400.0142
ALA 1410.0106
GLU 1420.0092
LYS 1430.0183
GLU 1440.0209
THR 1450.0169
ASN 1460.0263
GLY 1470.0198
LEU 1480.0154
ILE 1490.0087
LYS 1500.0113
GLU 1510.0126
LEU 1520.0132
LEU 1530.0171
PRO 1540.0192
LEU 1550.0194
GLY 1560.0192
SER 1570.0172
VAL 1580.0132
ASN 1590.0114
ASN 1600.0062
ALA 1610.0046
THR 1620.0069
ARG 1630.0055
LEU 1640.0083
ILE 1650.0089
PHE 1660.0089
ALA 1670.0110
ASN 1680.0079
ALA 1690.0058
LEU 1700.0043
TYR 1710.0050
PHE 1720.0060
LYS 1730.0082
GLY 1740.0072
ALA 1750.0069
TRP 1760.0053
ASN 1770.0045
ASP 1780.0040
LYS 1790.0086
PHE 1800.0087
ASP 1810.0252
ALA 1820.0287
SER 1830.0503
LYS 1840.0273
THR 1850.0118
GLU 1860.0119
ASP 1870.0077
TYR 1880.0109
GLU 1890.0117
PHE 1900.0061
HIS 1910.0122
LEU 1920.0139
LEU 1930.0111
ASN 1940.0719
GLY 1950.0601
SER 1960.0629
PRO 1970.0307
VAL 1980.0221
LYS 1990.0085
VAL 2000.0103
PRO 2010.0123
PHE 2020.0158
MET 2030.0113
THR 2040.0153
SER 2050.0137
LYS 2060.0240
LYS 2070.0179
LYS 2080.0207
GLN 2090.0114
PHE 2100.0133
ILE 2110.0131
ARG 2120.0086
ALA 2130.0156
PHE 2140.0156
ASP 2150.0362
GLY 2160.0224
PHE 2170.0105
LYS 2180.0124
VAL 2190.0088
LEU 2200.0108
GLY 2210.0090
LEU 2220.0077
PRO 2230.0058
TYR 2240.0048
LYS 2250.0049
GLN 2260.0062
GLY 2270.0151
GLU 2280.0177
ASP 2290.0067
LYS 2300.0164
ARG 2310.0118
GLN 2320.0120
PHE 2330.0064
THR 2340.0071
MET 2350.0061
TYR 2360.0085
PHE 2370.0117
PHE 2380.0114
LEU 2390.0173
PRO 2400.0161
ASN 2410.0178
ALA 2420.0201
LYS 2430.0213
ASP 2440.0165
GLY 2450.0186
LEU 2460.0188
ALA 2470.0185
ALA 2480.0096
LEU 2490.0069
VAL 2500.0138
GLU 2510.0210
LYS 2520.0197
VAL 2530.0184
ALA 2540.0268
SER 2550.0349
GLU 2560.0347
SER 2570.0322
GLU 2580.0381
LEU 2590.0332
LEU 2600.0227
GLN 2610.0224
HIS 2620.0246
LYS 2630.0132
LEU 2640.0079
PRO 2650.0015
PHE 2660.0030
GLY 2670.0131
LYS 2680.0137
VAL 2690.0334
GLU 2700.0309
VAL 2710.0223
GLY 2720.0208
ASP 2730.0173
PHE 2740.0165
ARG 2750.0186
ILE 2760.0199
PRO 2770.0186
LYS 2780.0195
PHE 2790.0179
ASN 2800.0177
ILE 2810.0138
SER 2820.0110
PHE 2830.0091
GLY 2840.0113
LEU 2850.0110
GLU 2860.0111
THR 2870.0076
SER 2880.0063
ASP 2890.0083
MET 2900.0088
LEU 2910.0054
LYS 2920.0050
GLU 2930.0072
LEU 2940.0071
GLY 2950.0046
VAL 2960.0049
VAL 2970.0067
LEU 2980.0079
PRO 2990.0065
PHE 3000.0056
SER 3010.0089
GLY 3020.0085
GLY 3030.0091
GLY 3040.0083
LEU 3050.0102
THR 3060.0099
LYS 3070.0093
MET 3080.0118
VAL 3090.0150
ASN 3100.0145
SER 3110.0166
SER 3120.0177
VAL 3130.0179
SER 3140.0144
GLN 3150.0119
ASN 3160.0143
LEU 3170.0125
CYS 3180.0105
VAL 3190.0077
SER 3200.0065
ASN 3210.0103
ILE 3220.0100
PHE 3230.0128
HIS 3240.0101
LYS 3250.0085
SER 3260.0040
PHE 3270.0049
ILE 3280.0076
GLU 3290.0154
VAL 3300.0144
ASN 3310.0152
GLU 3320.0115
GLU 3330.0109
GLY 3340.0079
THR 3350.0086
GLU 3360.0135
ALA 3370.0108
ALA 3380.0103
ALA 3390.0191
ALA 3400.0124
THR 3410.0096
ALA 3420.0048
ALA 3430.0190
THR 3440.0113
ILE 3450.0118
LEU 3460.0121
LEU 3470.0121
ARG 3480.0269
SER 3490.0495
ALA 3500.0408
MET 3510.0318
SER 3520.0393
ILE 3530.0570
PRO 3540.0643
PRO 3550.0404
ARG 3560.0237
LEU 3570.0202
ASP 3580.0189
PHE 3590.0198
VAL 3600.0216
ALA 3610.0254
ASP 3620.0174
HIS 3630.0173
PRO 3640.0194
PHE 3650.0174
LEU 3660.0120
PHE 3670.0101
MET 3680.0061
ILE 3690.0036
ARG 3700.0063
GLU 3710.0100
ASP 3720.0131
LEU 3730.0190
THR 3740.0166
GLY 3750.0137
THR 3760.0120
ILE 3770.0090
ILE 3780.0066
PHE 3790.0021
VAL 3800.0020
GLY 3810.0097
LEU 3820.0143
VAL 3830.0206
LEU 3840.0199
ASN 3850.0159
PRO 3860.0192
LEU 3870.0171
ALA 3880.0179
GLY 3890.0143

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.