CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  MADHURJA 389 AA truncatula medicago single  ***

<R2> analysis for 260222215518854084

---  normal mode 53  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0765
MET 10.0259
ASP 20.0242
LEU 30.0160
ARG 40.0202
GLU 50.0062
SER 60.0075
ILE 70.0067
ALA 80.0069
ASN 90.0100
GLN 100.0083
THR 110.0080
ASN 120.0095
VAL 130.0089
SER 140.0096
LEU 150.0149
SER 160.0126
VAL 170.0121
ALA 180.0146
LYS 190.0184
HIS 200.0146
LEU 210.0150
PHE 220.0147
SER 230.0123
LYS 240.0130
GLU 250.0111
SER 260.0188
ASP 270.0186
ASN 280.0210
ASN 290.0180
ILE 300.0161
VAL 310.0088
PHE 320.0074
SER 330.0040
PRO 340.0049
LEU 350.0043
SER 360.0041
LEU 370.0045
GLN 380.0051
VAL 390.0051
VAL 400.0031
LEU 410.0048
SER 420.0044
ILE 430.0032
ILE 440.0024
ALA 450.0048
SER 460.0045
GLY 470.0027
SER 480.0020
GLU 490.0064
GLY 500.0122
PRO 510.0120
THR 520.0074
GLN 530.0043
GLN 540.0070
GLN 550.0053
LEU 560.0043
PHE 570.0080
ASN 580.0074
PHE 590.0071
LEU 600.0072
GLN 610.0114
PRO 620.0109
LYS 630.0166
SER 640.0113
THR 650.0100
ASP 660.0131
HIS 670.0114
LEU 680.0108
ASN 690.0105
TYR 700.0113
PHE 710.0093
ALA 720.0103
SER 730.0104
GLN 740.0125
LEU 750.0106
VAL 760.0101
SER 770.0152
VAL 780.0153
ILE 790.0122
LEU 800.0126
SER 810.0166
ASP 820.0157
ALA 830.0105
SER 840.0181
PRO 850.0213
ALA 860.0161
GLY 870.0202
GLY 880.0096
PRO 890.0153
LEU 900.0164
LEU 910.0153
SER 920.0145
PHE 930.0099
VAL 940.0089
ASP 950.0054
GLY 960.0044
VAL 970.0055
TRP 980.0057
VAL 990.0075
ASP 1000.0076
GLN 1010.0107
THR 1020.0112
LEU 1030.0088
SER 1040.0080
LEU 1050.0063
GLN 1060.0069
PRO 1070.0111
SER 1080.0126
PHE 1090.0084
GLN 1100.0087
GLN 1110.0147
ILE 1120.0103
VAL 1130.0071
SER 1140.0090
THR 1150.0088
HIS 1160.0071
PHE 1170.0052
LYS 1180.0066
ALA 1190.0057
ALA 1200.0066
LEU 1210.0076
SER 1220.0079
SER 1230.0083
VAL 1240.0071
ASP 1250.0080
PHE 1260.0060
GLN 1270.0082
ASN 1280.0092
LYS 1290.0073
ALA 1300.0045
VAL 1310.0040
GLU 1320.0052
VAL 1330.0060
THR 1340.0055
ASN 1350.0065
GLU 1360.0074
VAL 1370.0067
ASN 1380.0064
SER 1390.0087
TRP 1400.0078
ALA 1410.0076
GLU 1420.0096
LYS 1430.0116
GLU 1440.0117
THR 1450.0132
ASN 1460.0170
GLY 1470.0119
LEU 1480.0106
ILE 1490.0076
LYS 1500.0080
GLU 1510.0041
LEU 1520.0049
LEU 1530.0072
PRO 1540.0071
LEU 1550.0065
GLY 1560.0059
SER 1570.0072
VAL 1580.0054
ASN 1590.0043
ASN 1600.0059
ALA 1610.0059
THR 1620.0043
ARG 1630.0049
LEU 1640.0052
ILE 1650.0038
PHE 1660.0045
ALA 1670.0039
ASN 1680.0044
ALA 1690.0067
LEU 1700.0075
TYR 1710.0105
PHE 1720.0108
LYS 1730.0131
GLY 1740.0142
ALA 1750.0117
TRP 1760.0133
ASN 1770.0177
ASP 1780.0189
LYS 1790.0192
PHE 1800.0197
ASP 1810.0428
ALA 1820.0380
SER 1830.0580
LYS 1840.0428
THR 1850.0213
GLU 1860.0142
ASP 1870.0111
TYR 1880.0162
GLU 1890.0193
PHE 1900.0182
HIS 1910.0132
LEU 1920.0223
LEU 1930.0223
ASN 1940.0765
GLY 1950.0406
SER 1960.0331
PRO 1970.0158
VAL 1980.0237
LYS 1990.0173
VAL 2000.0143
PRO 2010.0065
PHE 2020.0093
MET 2030.0132
THR 2040.0196
SER 2050.0198
LYS 2060.0363
LYS 2070.0265
LYS 2080.0263
GLN 2090.0142
PHE 2100.0107
ILE 2110.0127
ARG 2120.0189
ALA 2130.0250
PHE 2140.0280
ASP 2150.0400
GLY 2160.0387
PHE 2170.0224
LYS 2180.0178
VAL 2190.0112
LEU 2200.0083
GLY 2210.0067
LEU 2220.0073
PRO 2230.0102
TYR 2240.0110
LYS 2250.0085
GLN 2260.0039
GLY 2270.0243
GLU 2280.0324
ASP 2290.0126
LYS 2300.0264
ARG 2310.0114
GLN 2320.0090
PHE 2330.0087
THR 2340.0064
MET 2350.0026
TYR 2360.0023
PHE 2370.0084
PHE 2380.0098
LEU 2390.0158
PRO 2400.0168
ASN 2410.0226
ALA 2420.0159
LYS 2430.0073
ASP 2440.0071
GLY 2450.0112
LEU 2460.0127
ALA 2470.0173
ALA 2480.0223
LEU 2490.0172
VAL 2500.0194
GLU 2510.0283
LYS 2520.0290
VAL 2530.0280
ALA 2540.0309
SER 2550.0454
GLU 2560.0389
SER 2570.0345
GLU 2580.0531
LEU 2590.0291
LEU 2600.0287
GLN 2610.0315
HIS 2620.0258
LYS 2630.0188
LEU 2640.0241
PRO 2650.0218
PHE 2660.0383
GLY 2670.0190
LYS 2680.0158
VAL 2690.0211
GLU 2700.0293
VAL 2710.0224
GLY 2720.0281
ASP 2730.0148
PHE 2740.0099
ARG 2750.0049
ILE 2760.0056
PRO 2770.0096
LYS 2780.0054
PHE 2790.0111
ASN 2800.0096
ILE 2810.0099
SER 2820.0081
PHE 2830.0084
GLY 2840.0079
LEU 2850.0088
GLU 2860.0089
THR 2870.0081
SER 2880.0099
ASP 2890.0127
MET 2900.0123
LEU 2910.0087
LYS 2920.0104
GLU 2930.0115
LEU 2940.0117
GLY 2950.0085
VAL 2960.0066
VAL 2970.0086
LEU 2980.0085
PRO 2990.0065
PHE 3000.0071
SER 3010.0139
GLY 3020.0133
GLY 3030.0117
GLY 3040.0091
LEU 3050.0067
THR 3060.0065
LYS 3070.0036
MET 3080.0063
VAL 3090.0076
ASN 3100.0097
SER 3110.0196
SER 3120.0249
VAL 3130.0079
SER 3140.0103
GLN 3150.0205
ASN 3160.0182
LEU 3170.0076
CYS 3180.0081
VAL 3190.0055
SER 3200.0041
ASN 3210.0041
ILE 3220.0046
PHE 3230.0048
HIS 3240.0044
LYS 3250.0046
SER 3260.0053
PHE 3270.0061
ILE 3280.0067
GLU 3290.0071
VAL 3300.0077
ASN 3310.0089
GLU 3320.0150
GLU 3330.0143
GLY 3340.0144
THR 3350.0171
GLU 3360.0099
ALA 3370.0115
ALA 3380.0175
ALA 3390.0455
ALA 3400.0380
THR 3410.0251
ALA 3420.0293
ALA 3430.0201
THR 3440.0178
ILE 3450.0061
LEU 3460.0096
LEU 3470.0103
ARG 3480.0238
SER 3490.0353
ALA 3500.0404
MET 3510.0223
SER 3520.0395
ILE 3530.0541
PRO 3540.0393
PRO 3550.0376
ARG 3560.0303
LEU 3570.0225
ASP 3580.0231
PHE 3590.0075
VAL 3600.0055
ALA 3610.0093
ASP 3620.0109
HIS 3630.0152
PRO 3640.0147
PHE 3650.0132
LEU 3660.0119
PHE 3670.0064
MET 3680.0053
ILE 3690.0040
ARG 3700.0024
GLU 3710.0043
ASP 3720.0040
LEU 3730.0029
THR 3740.0019
GLY 3750.0005
THR 3760.0008
ILE 3770.0025
ILE 3780.0030
PHE 3790.0059
VAL 3800.0070
GLY 3810.0121
LEU 3820.0144
VAL 3830.0184
LEU 3840.0173
ASN 3850.0185
PRO 3860.0185
LEU 3870.0167
ALA 3880.0171
GLY 3890.0133

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.