Should you encounter any unexpected behaviour,
please let us know. elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.
***  MADHURJA 389 AA truncatula medicago single  ***
This page gives a visualization of the normalized mean square displacement <R2>
of all C-alpha atoms in the protein that are associated to this mode (black bars).
The three components of the corresponding eigenvector are shown on the left (colored bars).
Here is the raw data for <R2> and
for the eigenvector (shift-click on the links for download).
X
Y
Z
residue
<R2>
<R2>max = 0.0877
MET 1
0.0214
ASP 2
0.0207
LEU 3
0.0225
ARG 4
0.0140
GLU 5
0.0157
SER 6
0.0134
ILE 7
0.0090
ALA 8
0.0098
ASN 9
0.0062
GLN 10
0.0059
THR 11
0.0037
ASN 12
0.0077
VAL 13
0.0032
SER 14
0.0052
LEU 15
0.0083
SER 16
0.0083
VAL 17
0.0087
ALA 18
0.0090
LYS 19
0.0109
HIS 20
0.0138
LEU 21
0.0110
PHE 22
0.0097
SER 23
0.0205
LYS 24
0.0309
GLU 25
0.0200
SER 26
0.0181
ASP 27
0.0117
ASN 28
0.0186
ASN 29
0.0105
ILE 30
0.0109
VAL 31
0.0100
PHE 32
0.0080
SER 33
0.0103
PRO 34
0.0107
LEU 35
0.0114
SER 36
0.0128
LEU 37
0.0153
GLN 38
0.0133
VAL 39
0.0143
VAL 40
0.0156
LEU 41
0.0156
SER 42
0.0137
ILE 43
0.0127
ILE 44
0.0130
ALA 45
0.0191
SER 46
0.0197
GLY 47
0.0205
SER 48
0.0120
GLU 49
0.0209
GLY 50
0.0376
PRO 51
0.0367
THR 52
0.0155
GLN 53
0.0177
GLN 54
0.0300
GLN 55
0.0162
LEU 56
0.0172
PHE 57
0.0213
ASN 58
0.0210
PHE 59
0.0095
LEU 60
0.0130
GLN 61
0.0107
PRO 62
0.0092
LYS 63
0.0195
SER 64
0.0183
THR 65
0.0170
ASP 66
0.0279
HIS 67
0.0175
LEU 68
0.0062
ASN 69
0.0087
TYR 70
0.0147
PHE 71
0.0174
ALA 72
0.0124
SER 73
0.0165
GLN 74
0.0282
LEU 75
0.0233
VAL 76
0.0223
SER 77
0.0401
VAL 78
0.0419
ILE 79
0.0176
LEU 80
0.0134
SER 81
0.0236
ASP 82
0.0238
ALA 83
0.0139
SER 84
0.0090
PRO 85
0.0582
ALA 86
0.0305
GLY 87
0.0125
GLY 88
0.0112
PRO 89
0.0139
LEU 90
0.0175
LEU 91
0.0161
SER 92
0.0165
PHE 93
0.0101
VAL 94
0.0048
ASP 95
0.0098
GLY 96
0.0091
VAL 97
0.0094
TRP 98
0.0109
VAL 99
0.0103
ASP 100
0.0119
GLN 101
0.0168
THR 102
0.0227
LEU 103
0.0157
SER 104
0.0184
LEU 105
0.0142
GLN 106
0.0154
PRO 107
0.0242
SER 108
0.0216
PHE 109
0.0117
GLN 110
0.0108
GLN 111
0.0153
ILE 112
0.0164
VAL 113
0.0114
SER 114
0.0138
THR 115
0.0149
HIS 116
0.0098
PHE 117
0.0156
LYS 118
0.0213
ALA 119
0.0150
ALA 120
0.0108
LEU 121
0.0121
SER 122
0.0116
SER 123
0.0101
VAL 124
0.0137
ASP 125
0.0130
PHE 126
0.0134
GLN 127
0.0185
ASN 128
0.0282
LYS 129
0.0137
ALA 130
0.0143
VAL 131
0.0149
GLU 132
0.0102
VAL 133
0.0080
THR 134
0.0081
ASN 135
0.0163
GLU 136
0.0161
VAL 137
0.0138
ASN 138
0.0139
SER 139
0.0284
TRP 140
0.0182
ALA 141
0.0123
GLU 142
0.0320
LYS 143
0.0404
GLU 144
0.0274
THR 145
0.0301
ASN 146
0.0587
GLY 147
0.0424
LEU 148
0.0293
ILE 149
0.0211
LYS 150
0.0314
GLU 151
0.0085
LEU 152
0.0051
LEU 153
0.0030
PRO 154
0.0029
LEU 155
0.0188
GLY 156
0.0194
SER 157
0.0105
VAL 158
0.0133
ASN 159
0.0279
ASN 160
0.0234
ALA 161
0.0225
THR 162
0.0220
ARG 163
0.0135
LEU 164
0.0115
ILE 165
0.0069
PHE 166
0.0084
ALA 167
0.0083
ASN 168
0.0096
ALA 169
0.0074
LEU 170
0.0068
TYR 171
0.0131
PHE 172
0.0127
LYS 173
0.0154
GLY 174
0.0123
ALA 175
0.0106
TRP 176
0.0097
ASN 177
0.0088
ASP 178
0.0075
LYS 179
0.0092
PHE 180
0.0030
ASP 181
0.0061
ALA 182
0.0066
SER 183
0.0131
LYS 184
0.0051
THR 185
0.0051
GLU 186
0.0153
ASP 187
0.0091
TYR 188
0.0070
GLU 189
0.0087
PHE 190
0.0075
HIS 191
0.0102
LEU 192
0.0095
LEU 193
0.0082
ASN 194
0.0269
GLY 195
0.0169
SER 196
0.0114
PRO 197
0.0101
VAL 198
0.0062
LYS 199
0.0088
VAL 200
0.0076
PRO 201
0.0062
PHE 202
0.0079
MET 203
0.0074
THR 204
0.0088
SER 205
0.0115
LYS 206
0.0119
LYS 207
0.0071
LYS 208
0.0153
GLN 209
0.0142
PHE 210
0.0140
ILE 211
0.0118
ARG 212
0.0072
ALA 213
0.0045
PHE 214
0.0126
ASP 215
0.0321
GLY 216
0.0316
PHE 217
0.0113
LYS 218
0.0065
VAL 219
0.0087
LEU 220
0.0107
GLY 221
0.0104
LEU 222
0.0083
PRO 223
0.0065
TYR 224
0.0071
LYS 225
0.0067
GLN 226
0.0063
GLY 227
0.0201
GLU 228
0.0069
ASP 229
0.0127
LYS 230
0.0098
ARG 231
0.0097
GLN 232
0.0063
PHE 233
0.0029
THR 234
0.0048
MET 235
0.0068
TYR 236
0.0094
PHE 237
0.0094
PHE 238
0.0076
LEU 239
0.0083
PRO 240
0.0098
ASN 241
0.0187
ALA 242
0.0221
LYS 243
0.0216
ASP 244
0.0271
GLY 245
0.0148
LEU 246
0.0113
ALA 247
0.0185
ALA 248
0.0138
LEU 249
0.0077
VAL 250
0.0081
GLU 251
0.0083
LYS 252
0.0072
VAL 253
0.0091
ALA 254
0.0073
SER 255
0.0122
GLU 256
0.0152
SER 257
0.0134
GLU 258
0.0209
LEU 259
0.0196
LEU 260
0.0105
GLN 261
0.0087
HIS 262
0.0113
LYS 263
0.0066
LEU 264
0.0026
PRO 265
0.0078
PHE 266
0.0151
GLY 267
0.0234
LYS 268
0.0206
VAL 269
0.0219
GLU 270
0.0137
VAL 271
0.0138
GLY 272
0.0148
ASP 273
0.0123
PHE 274
0.0126
ARG 275
0.0125
ILE 276
0.0128
PRO 277
0.0113
LYS 278
0.0121
PHE 279
0.0102
ASN 280
0.0110
ILE 281
0.0114
SER 282
0.0104
PHE 283
0.0107
GLY 284
0.0107
LEU 285
0.0094
GLU 286
0.0086
THR 287
0.0124
SER 288
0.0072
ASP 289
0.0131
MET 290
0.0181
LEU 291
0.0126
LYS 292
0.0109
GLU 293
0.0152
LEU 294
0.0136
GLY 295
0.0064
VAL 296
0.0057
VAL 297
0.0094
LEU 298
0.0137
PRO 299
0.0064
PHE 300
0.0070
SER 301
0.0154
GLY 302
0.0147
GLY 303
0.0109
GLY 304
0.0070
LEU 305
0.0073
THR 306
0.0098
LYS 307
0.0080
MET 308
0.0146
VAL 309
0.0197
ASN 310
0.0198
SER 311
0.0248
SER 312
0.0245
VAL 313
0.0188
SER 314
0.0186
GLN 315
0.0149
ASN 316
0.0107
LEU 317
0.0098
CYS 318
0.0098
VAL 319
0.0066
SER 320
0.0081
ASN 321
0.0056
ILE 322
0.0088
PHE 323
0.0092
HIS 324
0.0099
LYS 325
0.0074
SER 326
0.0077
PHE 327
0.0072
ILE 328
0.0086
GLU 329
0.0075
VAL 330
0.0054
ASN 331
0.0035
GLU 332
0.0030
GLU 333
0.0087
GLY 334
0.0133
THR 335
0.0160
GLU 336
0.0092
ALA 337
0.0148
ALA 338
0.0877
ALA 339
0.0246
ALA 340
0.0239
THR 341
0.0259
ALA 342
0.0195
ALA 343
0.0207
THR 344
0.0184
ILE 345
0.0174
LEU 346
0.0206
LEU 347
0.0159
ARG 348
0.0209
SER 349
0.0163
ALA 350
0.0388
MET 351
0.0389
SER 352
0.0503
ILE 353
0.0245
PRO 354
0.0261
PRO 355
0.0205
ARG 356
0.0125
LEU 357
0.0147
ASP 358
0.0133
PHE 359
0.0093
VAL 360
0.0110
ALA 361
0.0148
ASP 362
0.0121
HIS 363
0.0081
PRO 364
0.0048
PHE 365
0.0049
LEU 366
0.0073
PHE 367
0.0088
MET 368
0.0078
ILE 369
0.0058
ARG 370
0.0054
GLU 371
0.0104
ASP 372
0.0113
LEU 373
0.0150
THR 374
0.0195
GLY 375
0.0137
THR 376
0.0128
ILE 377
0.0067
ILE 378
0.0076
PHE 379
0.0064
VAL 380
0.0072
GLY 381
0.0087
LEU 382
0.0078
VAL 383
0.0068
LEU 384
0.0043
ASN 385
0.0077
PRO 386
0.0105
LEU 387
0.0104
ALA 388
0.0127
GLY 389
0.0139
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.