CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  MADHURJA 389 AA truncatula medicago single  ***

<R2> analysis for 260222215650873397

---  normal mode 100  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0603
MET 10.0196
ASP 20.0175
LEU 30.0156
ARG 40.0150
GLU 50.0254
SER 60.0239
ILE 70.0199
ALA 80.0235
ASN 90.0181
GLN 100.0162
THR 110.0146
ASN 120.0144
VAL 130.0045
SER 140.0082
LEU 150.0080
SER 160.0056
VAL 170.0121
ALA 180.0155
LYS 190.0189
HIS 200.0196
LEU 210.0136
PHE 220.0144
SER 230.0312
LYS 240.0192
GLU 250.0287
SER 260.0233
ASP 270.0147
ASN 280.0303
ASN 290.0166
ILE 300.0134
VAL 310.0061
PHE 320.0033
SER 330.0037
PRO 340.0056
LEU 350.0041
SER 360.0048
LEU 370.0038
GLN 380.0017
VAL 390.0045
VAL 400.0038
LEU 410.0067
SER 420.0062
ILE 430.0035
ILE 440.0031
ALA 450.0064
SER 460.0069
GLY 470.0044
SER 480.0079
GLU 490.0182
GLY 500.0202
PRO 510.0098
THR 520.0077
GLN 530.0078
GLN 540.0096
GLN 550.0106
LEU 560.0094
PHE 570.0117
ASN 580.0167
PHE 590.0080
LEU 600.0038
GLN 610.0167
PRO 620.0153
LYS 630.0102
SER 640.0129
THR 650.0150
ASP 660.0241
HIS 670.0132
LEU 680.0170
ASN 690.0226
TYR 700.0251
PHE 710.0149
ALA 720.0187
SER 730.0185
GLN 740.0219
LEU 750.0165
VAL 760.0142
SER 770.0164
VAL 780.0207
ILE 790.0134
LEU 800.0132
SER 810.0166
ASP 820.0187
ALA 830.0190
SER 840.0196
PRO 850.0467
ALA 860.0214
GLY 870.0145
GLY 880.0183
PRO 890.0121
LEU 900.0120
LEU 910.0058
SER 920.0060
PHE 930.0055
VAL 940.0099
ASP 950.0062
GLY 960.0037
VAL 970.0064
TRP 980.0071
VAL 990.0126
ASP 1000.0117
GLN 1010.0219
THR 1020.0172
LEU 1030.0084
SER 1040.0095
LEU 1050.0133
GLN 1060.0121
PRO 1070.0291
SER 1080.0238
PHE 1090.0105
GLN 1100.0099
GLN 1110.0129
ILE 1120.0118
VAL 1130.0080
SER 1140.0118
THR 1150.0130
HIS 1160.0093
PHE 1170.0059
LYS 1180.0082
ALA 1190.0078
ALA 1200.0076
LEU 1210.0097
SER 1220.0104
SER 1230.0181
VAL 1240.0150
ASP 1250.0149
PHE 1260.0083
GLN 1270.0092
ASN 1280.0117
LYS 1290.0072
ALA 1300.0067
VAL 1310.0178
GLU 1320.0267
VAL 1330.0117
THR 1340.0131
ASN 1350.0141
GLU 1360.0134
VAL 1370.0118
ASN 1380.0113
SER 1390.0119
TRP 1400.0119
ALA 1410.0156
GLU 1420.0088
LYS 1430.0047
GLU 1440.0062
THR 1450.0122
ASN 1460.0161
GLY 1470.0204
LEU 1480.0264
ILE 1490.0216
LYS 1500.0179
GLU 1510.0110
LEU 1520.0127
LEU 1530.0086
PRO 1540.0097
LEU 1550.0181
GLY 1560.0238
SER 1570.0127
VAL 1580.0103
ASN 1590.0031
ASN 1600.0069
ALA 1610.0057
THR 1620.0069
ARG 1630.0070
LEU 1640.0076
ILE 1650.0039
PHE 1660.0035
ALA 1670.0034
ASN 1680.0044
ALA 1690.0115
LEU 1700.0088
TYR 1710.0156
PHE 1720.0118
LYS 1730.0157
GLY 1740.0105
ALA 1750.0095
TRP 1760.0100
ASN 1770.0134
ASP 1780.0115
LYS 1790.0078
PHE 1800.0052
ASP 1810.0090
ALA 1820.0054
SER 1830.0095
LYS 1840.0099
THR 1850.0054
GLU 1860.0115
ASP 1870.0067
TYR 1880.0121
GLU 1890.0097
PHE 1900.0076
HIS 1910.0099
LEU 1920.0112
LEU 1930.0142
ASN 1940.0389
GLY 1950.0106
SER 1960.0178
PRO 1970.0114
VAL 1980.0107
LYS 1990.0130
VAL 2000.0077
PRO 2010.0066
PHE 2020.0064
MET 2030.0040
THR 2040.0054
SER 2050.0155
LYS 2060.0142
LYS 2070.0122
LYS 2080.0162
GLN 2090.0105
PHE 2100.0074
ILE 2110.0086
ARG 2120.0105
ALA 2130.0179
PHE 2140.0215
ASP 2150.0284
GLY 2160.0351
PHE 2170.0162
LYS 2180.0168
VAL 2190.0134
LEU 2200.0067
GLY 2210.0072
LEU 2220.0073
PRO 2230.0078
TYR 2240.0072
LYS 2250.0058
GLN 2260.0110
GLY 2270.0508
GLU 2280.0192
ASP 2290.0413
LYS 2300.0297
ARG 2310.0099
GLN 2320.0096
PHE 2330.0075
THR 2340.0104
MET 2350.0084
TYR 2360.0066
PHE 2370.0079
PHE 2380.0121
LEU 2390.0124
PRO 2400.0107
ASN 2410.0266
ALA 2420.0264
LYS 2430.0138
ASP 2440.0198
GLY 2450.0113
LEU 2460.0058
ALA 2470.0059
ALA 2480.0113
LEU 2490.0107
VAL 2500.0113
GLU 2510.0121
LYS 2520.0073
VAL 2530.0075
ALA 2540.0099
SER 2550.0131
GLU 2560.0165
SER 2570.0174
GLU 2580.0416
LEU 2590.0261
LEU 2600.0181
GLN 2610.0156
HIS 2620.0280
LYS 2630.0160
LEU 2640.0180
PRO 2650.0105
PHE 2660.0183
GLY 2670.0279
LYS 2680.0216
VAL 2690.0225
GLU 2700.0092
VAL 2710.0137
GLY 2720.0126
ASP 2730.0134
PHE 2740.0114
ARG 2750.0070
ILE 2760.0047
PRO 2770.0040
LYS 2780.0045
PHE 2790.0115
ASN 2800.0132
ILE 2810.0156
SER 2820.0157
PHE 2830.0108
GLY 2840.0109
LEU 2850.0036
GLU 2860.0051
THR 2870.0048
SER 2880.0068
ASP 2890.0161
MET 2900.0140
LEU 2910.0115
LYS 2920.0121
GLU 2930.0199
LEU 2940.0196
GLY 2950.0135
VAL 2960.0122
VAL 2970.0115
LEU 2980.0087
PRO 2990.0074
PHE 3000.0034
SER 3010.0104
GLY 3020.0143
GLY 3030.0143
GLY 3040.0139
LEU 3050.0156
THR 3060.0173
LYS 3070.0091
MET 3080.0112
VAL 3090.0161
ASN 3100.0146
SER 3110.0197
SER 3120.0225
VAL 3130.0121
SER 3140.0250
GLN 3150.0240
ASN 3160.0088
LEU 3170.0135
CYS 3180.0131
VAL 3190.0025
SER 3200.0026
ASN 3210.0040
ILE 3220.0039
PHE 3230.0039
HIS 3240.0048
LYS 3250.0131
SER 3260.0112
PHE 3270.0169
ILE 3280.0142
GLU 3290.0157
VAL 3300.0119
ASN 3310.0103
GLU 3320.0081
GLU 3330.0157
GLY 3340.0103
THR 3350.0064
GLU 3360.0171
ALA 3370.0309
ALA 3380.0333
ALA 3390.0115
ALA 3400.0177
THR 3410.0276
ALA 3420.0200
ALA 3430.0315
THR 3440.0166
ILE 3450.0206
LEU 3460.0135
LEU 3470.0127
ARG 3480.0301
SER 3490.0371
ALA 3500.0254
MET 3510.0278
SER 3520.0243
ILE 3530.0237
PRO 3540.0603
PRO 3550.0301
ARG 3560.0228
LEU 3570.0146
ASP 3580.0111
PHE 3590.0067
VAL 3600.0080
ALA 3610.0045
ASP 3620.0030
HIS 3630.0030
PRO 3640.0058
PHE 3650.0061
LEU 3660.0051
PHE 3670.0035
MET 3680.0046
ILE 3690.0092
ARG 3700.0082
GLU 3710.0068
ASP 3720.0135
LEU 3730.0292
THR 3740.0211
GLY 3750.0148
THR 3760.0105
ILE 3770.0083
ILE 3780.0072
PHE 3790.0040
VAL 3800.0012
GLY 3810.0087
LEU 3820.0117
VAL 3830.0102
LEU 3840.0124
ASN 3850.0160
PRO 3860.0115
LEU 3870.0181
ALA 3880.0238
GLY 3890.0194

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.