CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  MADHURJA 389 AA truncatula medicago single  ***

<R2> analysis for 260222215650873397

---  normal mode 92  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0618
MET 10.0080
ASP 20.0201
LEU 30.0142
ARG 40.0164
GLU 50.0138
SER 60.0146
ILE 70.0153
ALA 80.0188
ASN 90.0102
GLN 100.0100
THR 110.0137
ASN 120.0119
VAL 130.0076
SER 140.0057
LEU 150.0069
SER 160.0079
VAL 170.0079
ALA 180.0073
LYS 190.0128
HIS 200.0126
LEU 210.0090
PHE 220.0099
SER 230.0192
LYS 240.0121
GLU 250.0056
SER 260.0068
ASP 270.0241
ASN 280.0280
ASN 290.0143
ILE 300.0121
VAL 310.0102
PHE 320.0099
SER 330.0072
PRO 340.0071
LEU 350.0093
SER 360.0068
LEU 370.0101
GLN 380.0069
VAL 390.0134
VAL 400.0141
LEU 410.0151
SER 420.0173
ILE 430.0173
ILE 440.0159
ALA 450.0178
SER 460.0198
GLY 470.0180
SER 480.0142
GLU 490.0254
GLY 500.0310
PRO 510.0344
THR 520.0184
GLN 530.0058
GLN 540.0162
GLN 550.0214
LEU 560.0142
PHE 570.0171
ASN 580.0260
PHE 590.0169
LEU 600.0171
GLN 610.0135
PRO 620.0115
LYS 630.0118
SER 640.0116
THR 650.0150
ASP 660.0082
HIS 670.0033
LEU 680.0093
ASN 690.0096
TYR 700.0165
PHE 710.0207
ALA 720.0249
SER 730.0265
GLN 740.0368
LEU 750.0256
VAL 760.0259
SER 770.0318
VAL 780.0263
ILE 790.0184
LEU 800.0173
SER 810.0183
ASP 820.0128
ALA 830.0096
SER 840.0095
PRO 850.0197
ALA 860.0090
GLY 870.0085
GLY 880.0108
PRO 890.0092
LEU 900.0119
LEU 910.0102
SER 920.0103
PHE 930.0113
VAL 940.0116
ASP 950.0073
GLY 960.0080
VAL 970.0076
TRP 980.0068
VAL 990.0099
ASP 1000.0094
GLN 1010.0192
THR 1020.0214
LEU 1030.0125
SER 1040.0194
LEU 1050.0209
GLN 1060.0222
PRO 1070.0377
SER 1080.0389
PHE 1090.0259
GLN 1100.0219
GLN 1110.0266
ILE 1120.0206
VAL 1130.0180
SER 1140.0171
THR 1150.0134
HIS 1160.0061
PHE 1170.0105
LYS 1180.0062
ALA 1190.0093
ALA 1200.0084
LEU 1210.0106
SER 1220.0073
SER 1230.0126
VAL 1240.0130
ASP 1250.0142
PHE 1260.0108
GLN 1270.0114
ASN 1280.0130
LYS 1290.0110
ALA 1300.0103
VAL 1310.0071
GLU 1320.0071
VAL 1330.0088
THR 1340.0050
ASN 1350.0049
GLU 1360.0061
VAL 1370.0059
ASN 1380.0057
SER 1390.0117
TRP 1400.0108
ALA 1410.0090
GLU 1420.0121
LYS 1430.0220
GLU 1440.0252
THR 1450.0157
ASN 1460.0217
GLY 1470.0088
LEU 1480.0060
ILE 1490.0067
LYS 1500.0079
GLU 1510.0076
LEU 1520.0046
LEU 1530.0024
PRO 1540.0111
LEU 1550.0309
GLY 1560.0384
SER 1570.0174
VAL 1580.0131
ASN 1590.0067
ASN 1600.0114
ALA 1610.0093
THR 1620.0072
ARG 1630.0071
LEU 1640.0097
ILE 1650.0085
PHE 1660.0086
ALA 1670.0083
ASN 1680.0081
ALA 1690.0074
LEU 1700.0062
TYR 1710.0037
PHE 1720.0025
LYS 1730.0116
GLY 1740.0096
ALA 1750.0174
TRP 1760.0147
ASN 1770.0162
ASP 1780.0149
LYS 1790.0148
PHE 1800.0093
ASP 1810.0137
ALA 1820.0086
SER 1830.0144
LYS 1840.0178
THR 1850.0128
GLU 1860.0188
ASP 1870.0185
TYR 1880.0146
GLU 1890.0072
PHE 1900.0073
HIS 1910.0067
LEU 1920.0063
LEU 1930.0064
ASN 1940.0289
GLY 1950.0119
SER 1960.0070
PRO 1970.0057
VAL 1980.0050
LYS 1990.0115
VAL 2000.0121
PRO 2010.0153
PHE 2020.0136
MET 2030.0115
THR 2040.0111
SER 2050.0036
LYS 2060.0135
LYS 2070.0127
LYS 2080.0129
GLN 2090.0084
PHE 2100.0111
ILE 2110.0176
ARG 2120.0170
ALA 2130.0234
PHE 2140.0193
ASP 2150.0618
GLY 2160.0352
PHE 2170.0118
LYS 2180.0208
VAL 2190.0181
LEU 2200.0165
GLY 2210.0079
LEU 2220.0047
PRO 2230.0084
TYR 2240.0092
LYS 2250.0169
GLN 2260.0138
GLY 2270.0202
GLU 2280.0108
ASP 2290.0142
LYS 2300.0148
ARG 2310.0059
GLN 2320.0094
PHE 2330.0065
THR 2340.0071
MET 2350.0065
TYR 2360.0086
PHE 2370.0117
PHE 2380.0132
LEU 2390.0092
PRO 2400.0034
ASN 2410.0249
ALA 2420.0362
LYS 2430.0268
ASP 2440.0403
GLY 2450.0203
LEU 2460.0166
ALA 2470.0197
ALA 2480.0132
LEU 2490.0130
VAL 2500.0155
GLU 2510.0222
LYS 2520.0216
VAL 2530.0200
ALA 2540.0211
SER 2550.0378
GLU 2560.0160
SER 2570.0252
GLU 2580.0414
LEU 2590.0261
LEU 2600.0038
GLN 2610.0256
HIS 2620.0304
LYS 2630.0133
LEU 2640.0035
PRO 2650.0064
PHE 2660.0165
GLY 2670.0139
LYS 2680.0126
VAL 2690.0202
GLU 2700.0166
VAL 2710.0153
GLY 2720.0157
ASP 2730.0073
PHE 2740.0067
ARG 2750.0073
ILE 2760.0105
PRO 2770.0094
LYS 2780.0083
PHE 2790.0097
ASN 2800.0105
ILE 2810.0114
SER 2820.0109
PHE 2830.0096
GLY 2840.0050
LEU 2850.0088
GLU 2860.0104
THR 2870.0117
SER 2880.0146
ASP 2890.0111
MET 2900.0086
LEU 2910.0073
LYS 2920.0126
GLU 2930.0098
LEU 2940.0137
GLY 2950.0301
VAL 2960.0169
VAL 2970.0237
LEU 2980.0258
PRO 2990.0161
PHE 3000.0221
SER 3010.0325
GLY 3020.0290
GLY 3030.0215
GLY 3040.0161
LEU 3050.0095
THR 3060.0111
LYS 3070.0173
MET 3080.0138
VAL 3090.0140
ASN 3100.0207
SER 3110.0164
SER 3120.0385
VAL 3130.0048
SER 3140.0072
GLN 3150.0130
ASN 3160.0127
LEU 3170.0156
CYS 3180.0170
VAL 3190.0163
SER 3200.0138
ASN 3210.0119
ILE 3220.0111
PHE 3230.0081
HIS 3240.0086
LYS 3250.0054
SER 3260.0075
PHE 3270.0051
ILE 3280.0062
GLU 3290.0096
VAL 3300.0097
ASN 3310.0109
GLU 3320.0105
GLU 3330.0185
GLY 3340.0195
THR 3350.0186
GLU 3360.0111
ALA 3370.0061
ALA 3380.0116
ALA 3390.0260
ALA 3400.0256
THR 3410.0330
ALA 3420.0201
ALA 3430.0255
THR 3440.0070
ILE 3450.0198
LEU 3460.0220
LEU 3470.0358
ARG 3480.0320
SER 3490.0581
ALA 3500.0309
MET 3510.0478
SER 3520.0227
ILE 3530.0281
PRO 3540.0342
PRO 3550.0204
ARG 3560.0131
LEU 3570.0140
ASP 3580.0132
PHE 3590.0141
VAL 3600.0097
ALA 3610.0074
ASP 3620.0069
HIS 3630.0051
PRO 3640.0106
PHE 3650.0068
LEU 3660.0088
PHE 3670.0087
MET 3680.0070
ILE 3690.0081
ARG 3700.0083
GLU 3710.0079
ASP 3720.0109
LEU 3730.0117
THR 3740.0067
GLY 3750.0107
THR 3760.0110
ILE 3770.0054
ILE 3780.0052
PHE 3790.0073
VAL 3800.0087
GLY 3810.0116
LEU 3820.0112
VAL 3830.0113
LEU 3840.0123
ASN 3850.0136
PRO 3860.0104
LEU 3870.0154
ALA 3880.0203
GLY 3890.0233

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.