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***  ENDOCYTOSIS 29-JUN-09 3I2W  ***

<R2> analysis for 2602230445411017275

---  normal mode 28  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0439
SER 140.0255
ASP 150.0229
SER 160.0183
PHE 170.0163
TRP 180.0161
GLU 190.0194
PRO 200.0215
GLY 210.0229
ASN 220.0200
TYR 230.0185
LYS 240.0198
ARG 250.0176
THR 260.0135
THR 270.0136
LYS 280.0140
ARG 290.0100
ILE 300.0058
GLU 310.0082
ASP 320.0116
GLY 330.0090
TYR 340.0105
LYS 350.0143
LEU 360.0152
CYS 370.0157
ASN 380.0190
ASP 390.0181
LEU 400.0164
GLN 410.0179
GLN 420.0194
LEU 430.0159
ILE 440.0138
GLN 450.0164
GLU 460.0156
ARG 470.0097
ALA 480.0093
ASP 490.0105
ILE 500.0058
GLU 510.0019
LYS 520.0025
GLY 530.0073
TYR 540.0087
ALA 550.0089
LYS 560.0136
SER 570.0150
LEU 580.0147
ARG 590.0163
THR 600.0195
TRP 610.0183
SER 620.0174
LYS 630.0215
LYS 640.0218
TRP 650.0177
GLY 660.0185
GLU 670.0209
LEU 680.0170
ILE 690.0130
GLU 700.0158
LYS 710.0152
GLY 720.0091
PRO 730.0059
GLU 740.0041
TYR 750.0074
GLY 760.0104
THR 770.0115
THR 780.0077
GLU 790.0082
ALA 800.0113
ALA 810.0079
TRP 820.0073
LYS 830.0121
GLY 840.0109
VAL 850.0111
LEU 860.0142
THR 870.0139
GLU 880.0121
SER 890.0129
GLU 900.0139
ARG 910.0126
ILE 920.0102
SER 930.0107
ASP 940.0097
VAL 950.0062
HIS 960.0045
LYS 980.0080
ILE 990.0045
LYS 1000.0074
ASP 1010.0121
ASN 1020.0121
LEU 1030.0118
CYS 1040.0164
ASN 1050.0188
ASP 1060.0169
VAL 1070.0157
ASN 1080.0182
SER 1090.0204
GLN 1100.0181
ILE 1110.0175
LYS 1120.0202
THR 1130.0176
TRP 1140.0144
GLN 1150.0140
LYS 1160.0125
GLU 1170.0113
ASN 1180.0068
TYR 1190.0041
HIS 1200.0020
HIS 1210.0046
THR 1220.0134
LEU 1230.0165
GLN 1250.0145
ILE 1260.0091
LYS 1270.0103
GLU 1280.0099
ARG 1290.0120
LYS 1300.0175
ASP 1310.0192
LEU 1320.0174
GLU 1330.0209
ASP 1340.0254
LEU 1350.0228
PHE 1360.0215
LYS 1370.0249
LYS 1380.0252
ALA 1390.0208
GLN 1400.0203
LYS 1410.0219
PRO 1420.0180
TRP 1430.0145
ALA 1440.0164
LYS 1450.0138
LEU 1460.0083
LEU 1470.0108
ALA 1480.0117
LYS 1490.0110
VAL 1500.0150
GLU 1510.0175
LYS 1520.0182
ALA 1530.0211
LYS 1540.0243
ALA 1550.0238
ASP 1560.0238
TYR 1570.0242
HIS 1580.0227
SER 1590.0231
ALA 1600.0191
CYS 1610.0162
LYS 1620.0241
THR 1630.0197
GLU 1640.0138
ARG 1650.0240
SER 1660.0297
ALA 1670.0234
THR 1680.0322
HIS 1890.0438
ASP 1900.0317
ARG 1910.0140
VAL 1920.0198
GLN 1930.0214
LYS 1940.0199
THR 1950.0077
LYS 1960.0080
ASP 1970.0182
GLN 1980.0179
VAL 1990.0184
GLN 2000.0210
LYS 2010.0229
CYS 2020.0236
ARG 2030.0264
GLU 2040.0256
LYS 2050.0223
TYR 2060.0242
GLU 2070.0247
GLN 2080.0197
ALA 2090.0148
ILE 2100.0149
ALA 2110.0151
GLU 2120.0098
ILE 2130.0052
THR 2140.0065
LYS 2150.0091
TYR 2160.0088
ASN 2170.0076
SER 2180.0100
VAL 2190.0133
TYR 2200.0139
ILE 2210.0121
GLU 2220.0129
ASP 2230.0162
THR 2250.0126
SER 2260.0142
VAL 2270.0159
PHE 2280.0121
GLU 2290.0096
LYS 2300.0113
CYS 2310.0084
GLN 2320.0048
THR 2330.0040
PHE 2340.0019
GLU 2350.0034
LYS 2360.0040
THR 2370.0065
ARG 2380.0085
LEU 2390.0087
GLN 2400.0088
PHE 2410.0112
PHE 2420.0120
LYS 2430.0100
GLU 2440.0110
ILE 2450.0124
LEU 2460.0098
PHE 2470.0084
ASN 2480.0103
VAL 2490.0084
HIS 2500.0044
SER 2510.0065
CYS 2520.0061
LEU 2530.0019
ASP 2540.0039
LEU 2550.0065
THR 2560.0090
LYS 2570.0093
VAL 2580.0072
GLN 2590.0066
SER 2600.0081
LEU 2610.0095
PRO 2620.0081
GLN 2630.0093
ILE 2640.0108
TYR 2650.0092
GLU 2660.0091
GLU 2670.0114
PHE 2680.0096
SER 2690.0079
HIS 2700.0108
THR 2710.0110
ILE 2720.0078
ASN 2730.0096
ASN 2740.0125
ALA 2750.0102
ASP 2760.0131
GLN 2770.0116
GLN 2780.0145
LYS 2790.0130
ASP 2800.0100
LEU 2810.0108
LYS 2820.0095
TRP 2830.0093
TRP 2840.0093
SER 2850.0081
ASN 2860.0098
ASN 2870.0114
HIS 2880.0115
GLY 2890.0084
ILE 2900.0070
ASN 2910.0089
ALA 2930.0263
ASN 2950.0243
TRP 2960.0199
PRO 2970.0157
SER 2980.0122
PHE 2990.0071
VAL 3000.0129
GLU 3010.0149
TYR 3020.0158
THR 3030.0250
SER 140.0265
ASP 150.0244
SER 160.0190
PHE 170.0128
TRP 180.0102
GLU 190.0117
PRO 200.0087
GLY 210.0129
ASN 220.0138
TYR 230.0099
LYS 240.0142
ARG 250.0150
THR 260.0109
THR 270.0118
LYS 280.0135
ARG 290.0103
ILE 300.0097
GLU 310.0098
ASP 320.0072
GLY 330.0068
TYR 340.0069
LYS 350.0063
LEU 360.0067
CYS 370.0069
ASN 380.0107
ASP 390.0108
LEU 400.0096
GLN 410.0125
GLN 420.0156
LEU 430.0143
ILE 440.0132
GLN 450.0160
GLU 460.0174
ARG 470.0148
ALA 480.0145
ASP 490.0161
ILE 500.0137
GLU 510.0120
LYS 520.0128
GLY 530.0077
TYR 540.0065
ALA 550.0094
LYS 560.0100
SER 570.0073
LEU 580.0081
ARG 590.0128
THR 600.0149
TRP 610.0137
SER 620.0136
LYS 630.0186
LYS 640.0202
TRP 650.0172
GLY 660.0167
GLU 670.0204
LEU 680.0191
ILE 690.0148
GLU 700.0155
LYS 710.0161
GLY 720.0145
PRO 730.0140
GLU 740.0113
TYR 750.0104
GLY 760.0097
THR 770.0083
THR 780.0091
GLU 790.0105
ALA 800.0092
ALA 810.0084
TRP 820.0105
LYS 830.0098
GLY 840.0074
VAL 850.0081
LEU 860.0102
THR 870.0099
GLU 880.0059
SER 890.0064
GLU 900.0108
ARG 910.0108
ILE 920.0081
SER 930.0093
ASP 940.0130
VAL 950.0119
HIS 960.0109
LYS 980.0114
ILE 990.0115
LYS 1000.0125
ASP 1010.0125
ASN 1020.0109
LEU 1030.0114
CYS 1040.0134
ASN 1050.0134
ASP 1060.0105
VAL 1070.0102
ASN 1080.0125
SER 1090.0148
GLN 1100.0123
ILE 1110.0108
LYS 1120.0143
THR 1130.0150
TRP 1140.0122
GLN 1150.0107
LYS 1160.0136
GLU 1170.0147
ASN 1180.0113
TYR 1190.0085
HIS 1200.0085
HIS 1210.0082
THR 1220.0148
LEU 1230.0231
GLN 1250.0162
ILE 1260.0118
LYS 1270.0115
GLU 1280.0108
ARG 1290.0123
LYS 1300.0151
ASP 1310.0141
LEU 1320.0121
GLU 1330.0143
ASP 1340.0155
LEU 1350.0123
PHE 1360.0093
LYS 1370.0126
LYS 1380.0148
ALA 1390.0100
GLN 1400.0068
LYS 1410.0113
PRO 1420.0134
TRP 1430.0094
ALA 1440.0055
LYS 1450.0076
LEU 1460.0122
LEU 1470.0109
ALA 1480.0094
LYS 1490.0142
VAL 1500.0145
GLU 1510.0152
LYS 1520.0207
ALA 1530.0154
LYS 1540.0131
ALA 1550.0182
ASP 1560.0172
TYR 1570.0084
HIS 1580.0083
SER 1590.0106
ALA 1600.0067
CYS 1610.0039
LYS 1620.0072
THR 1630.0015
GLU 1640.0094
ARG 1650.0135
SER 1660.0103
ALA 1670.0100
THR 1680.0133
ASN 1690.0137
GLN 1700.0104
GLU 1710.0084
ARG 1720.0099
ASN 1730.0128
ALA 1740.0104
ASN 1750.0091
ALA 1760.0233
ASP 1770.0322
SER 1780.0415
SER 1790.0439
LEU 1800.0199
SER 1810.0112
PRO 1820.0286
ASP 1830.0309
GLN 1840.0156
VAL 1850.0085
LYS 1860.0171
LYS 1870.0193
HIS 1890.0105
ASP 1900.0096
ARG 1910.0102
VAL 1920.0111
GLN 1930.0177
LYS 1940.0160
THR 1950.0133
LYS 1960.0192
ASP 1970.0250
GLN 1980.0180
VAL 1990.0139
GLN 2000.0207
LYS 2010.0236
CYS 2020.0152
ARG 2030.0102
GLU 2040.0147
LYS 2050.0166
TYR 2060.0097
GLU 2070.0045
GLN 2080.0103
ALA 2090.0147
ILE 2100.0132
ALA 2110.0153
GLU 2120.0162
ILE 2130.0172
THR 2140.0220
LYS 2150.0255
TYR 2160.0215
ASN 2170.0196
SER 2180.0231
VAL 2190.0208
TYR 2200.0132
ILE 2210.0140
GLU 2220.0154
ASP 2230.0114
THR 2250.0031
SER 2260.0052
VAL 2270.0065
PHE 2280.0056
GLU 2290.0039
LYS 2300.0067
CYS 2310.0094
GLN 2320.0092
THR 2330.0091
PHE 2340.0110
GLU 2350.0101
LYS 2360.0108
THR 2370.0107
ARG 2380.0083
LEU 2390.0082
GLN 2400.0089
PHE 2410.0075
PHE 2420.0052
LYS 2430.0055
GLU 2440.0055
ILE 2450.0051
LEU 2460.0048
PHE 2470.0046
ASN 2480.0046
VAL 2490.0070
HIS 2500.0071
SER 2510.0062
CYS 2520.0083
LEU 2530.0093
ASP 2540.0087
LEU 2550.0094
THR 2560.0099
LYS 2570.0090
VAL 2580.0112
GLN 2590.0139
SER 2600.0129
LEU 2610.0106
PRO 2620.0110
GLN 2630.0112
ILE 2640.0079
TYR 2650.0048
GLU 2660.0061
GLU 2670.0058
PHE 2680.0031
SER 2690.0012
HIS 2700.0011
THR 2710.0045
ILE 2720.0057
ASN 2730.0051
ASN 2740.0052
ALA 2750.0077
ASP 2760.0082
GLN 2770.0065
GLN 2780.0055
LYS 2790.0082
ASP 2800.0078
LEU 2810.0054
LYS 2820.0070
TRP 2830.0106
TRP 2840.0096
SER 2850.0100
ASN 2860.0130
ASN 2870.0153
HIS 2880.0141
GLY 2890.0126
ILE 2900.0123
ASN 2910.0127
ALA 2930.0106
ASN 2950.0095
TRP 2960.0092
PRO 2970.0144
SER 2980.0214

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.