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***  ENDOCYTOSIS 29-JUN-09 3I2W  ***

<R2> analysis for 2602230445411017275

---  normal mode 40  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0756
SER 140.0392
ASP 150.0314
SER 160.0229
PHE 170.0158
TRP 180.0143
GLU 190.0211
PRO 200.0196
GLY 210.0235
ASN 220.0192
TYR 230.0133
LYS 240.0160
ARG 250.0152
THR 260.0134
THR 270.0127
LYS 280.0108
ARG 290.0132
ILE 300.0098
GLU 310.0113
ASP 320.0139
GLY 330.0130
TYR 340.0130
LYS 350.0132
LEU 360.0124
CYS 370.0118
ASN 380.0116
ASP 390.0106
LEU 400.0088
GLN 410.0104
GLN 420.0120
LEU 430.0105
ILE 440.0114
GLN 450.0137
GLU 460.0138
ARG 470.0134
ALA 480.0139
ASP 490.0128
ILE 500.0116
GLU 510.0113
LYS 520.0103
GLY 530.0110
TYR 540.0099
ALA 550.0104
LYS 560.0133
SER 570.0111
LEU 580.0107
ARG 590.0114
THR 600.0108
TRP 610.0111
SER 620.0110
LYS 630.0098
LYS 640.0110
TRP 650.0097
GLY 660.0075
GLU 670.0101
LEU 680.0124
ILE 690.0092
GLU 700.0108
LYS 710.0162
GLY 720.0113
PRO 730.0088
GLU 740.0079
TYR 750.0093
GLY 760.0096
THR 770.0069
THR 780.0060
GLU 790.0077
ALA 800.0064
ALA 810.0072
TRP 820.0079
LYS 830.0070
GLY 840.0083
VAL 850.0103
LEU 860.0097
THR 870.0105
GLU 880.0108
SER 890.0108
GLU 900.0113
ARG 910.0117
ILE 920.0103
SER 930.0106
ASP 940.0106
VAL 950.0112
HIS 960.0115
LYS 980.0187
ILE 990.0158
LYS 1000.0149
ASP 1010.0188
ASN 1020.0169
LEU 1030.0143
CYS 1040.0159
ASN 1050.0189
ASP 1060.0145
VAL 1070.0102
ASN 1080.0120
SER 1090.0133
GLN 1100.0093
ILE 1110.0100
LYS 1120.0125
THR 1130.0105
TRP 1140.0107
GLN 1150.0119
LYS 1160.0099
GLU 1170.0103
ASN 1180.0095
TYR 1190.0074
HIS 1200.0158
HIS 1210.0258
THR 1220.0520
LEU 1230.0756
GLN 1250.0294
ILE 1260.0166
LYS 1270.0174
GLU 1280.0074
ARG 1290.0050
LYS 1300.0082
ASP 1310.0144
LEU 1320.0143
GLU 1330.0128
ASP 1340.0150
LEU 1350.0154
PHE 1360.0152
LYS 1370.0137
LYS 1380.0123
ALA 1390.0089
GLN 1400.0088
LYS 1410.0081
PRO 1420.0018
TRP 1430.0049
ALA 1440.0068
LYS 1450.0038
LEU 1460.0096
LEU 1470.0106
ALA 1480.0078
LYS 1490.0113
VAL 1500.0106
GLU 1510.0117
LYS 1520.0140
ALA 1530.0090
LYS 1540.0119
ALA 1550.0179
ASP 1560.0105
TYR 1570.0116
HIS 1580.0196
SER 1590.0146
ALA 1600.0089
CYS 1610.0125
LYS 1620.0104
THR 1630.0094
GLU 1640.0065
ARG 1650.0078
SER 1660.0168
ALA 1670.0168
THR 1680.0216
HIS 1890.0334
ASP 1900.0187
ARG 1910.0047
VAL 1920.0078
GLN 1930.0089
LYS 1940.0145
THR 1950.0070
LYS 1960.0053
ASP 1970.0087
GLN 1980.0092
VAL 1990.0135
GLN 2000.0170
LYS 2010.0126
CYS 2020.0064
ARG 2030.0138
GLU 2040.0128
LYS 2050.0078
TYR 2060.0034
GLU 2070.0046
GLN 2080.0071
ALA 2090.0113
ILE 2100.0125
ALA 2110.0145
GLU 2120.0158
ILE 2130.0153
THR 2140.0226
LYS 2150.0243
TYR 2160.0154
ASN 2170.0156
SER 2180.0164
VAL 2190.0086
TYR 2200.0033
ILE 2210.0068
GLU 2220.0021
ASP 2230.0056
THR 2250.0089
SER 2260.0105
VAL 2270.0133
PHE 2280.0121
GLU 2290.0126
LYS 2300.0127
CYS 2310.0134
GLN 2320.0132
THR 2330.0135
PHE 2340.0121
GLU 2350.0119
LYS 2360.0115
THR 2370.0119
ARG 2380.0116
LEU 2390.0116
GLN 2400.0106
PHE 2410.0098
PHE 2420.0095
LYS 2430.0085
GLU 2440.0084
ILE 2450.0085
LEU 2460.0091
PHE 2470.0087
ASN 2480.0105
VAL 2490.0127
HIS 2500.0120
SER 2510.0138
CYS 2520.0153
LEU 2530.0142
ASP 2540.0148
LEU 2550.0148
THR 2560.0169
LYS 2570.0183
VAL 2580.0107
GLN 2590.0068
SER 2600.0079
LEU 2610.0096
PRO 2620.0089
GLN 2630.0105
ILE 2640.0119
TYR 2650.0109
GLU 2660.0113
GLU 2670.0128
PHE 2680.0112
SER 2690.0110
HIS 2700.0119
THR 2710.0092
ILE 2720.0084
ASN 2730.0099
ASN 2740.0072
ALA 2750.0063
ASP 2760.0069
GLN 2770.0082
GLN 2780.0110
LYS 2790.0116
ASP 2800.0104
LEU 2810.0111
LYS 2820.0160
TRP 2830.0153
TRP 2840.0112
SER 2850.0115
ASN 2860.0132
ASN 2870.0108
HIS 2880.0058
GLY 2890.0067
ILE 2900.0094
ASN 2910.0111
ALA 2930.0134
ASN 2950.0200
TRP 2960.0121
PRO 2970.0151
SER 2980.0304
PHE 2990.0254
VAL 3000.0241
GLU 3010.0231
TYR 3020.0109
THR 3030.0076
SER 140.0164
ASP 150.0125
SER 160.0095
PHE 170.0078
TRP 180.0077
GLU 190.0083
PRO 200.0056
GLY 210.0060
ASN 220.0073
TYR 230.0067
LYS 240.0067
ARG 250.0062
THR 260.0049
THR 270.0056
LYS 280.0061
ARG 290.0065
ILE 300.0063
GLU 310.0079
ASP 320.0070
GLY 330.0080
TYR 340.0093
LYS 350.0066
LEU 360.0069
CYS 370.0076
ASN 380.0066
ASP 390.0074
LEU 400.0077
GLN 410.0079
GLN 420.0104
LEU 430.0108
ILE 440.0113
GLN 450.0134
GLU 460.0138
ARG 470.0127
ALA 480.0132
ASP 490.0119
ILE 500.0095
GLU 510.0097
LYS 520.0095
GLY 530.0107
TYR 540.0102
ALA 550.0111
LYS 560.0153
SER 570.0147
LEU 580.0138
ARG 590.0145
THR 600.0147
TRP 610.0137
SER 620.0140
LYS 630.0140
LYS 640.0123
TRP 650.0102
GLY 660.0091
GLU 670.0079
LEU 680.0097
ILE 690.0081
GLU 700.0075
LYS 710.0111
GLY 720.0123
PRO 730.0136
GLU 740.0132
TYR 750.0131
GLY 760.0122
THR 770.0109
THR 780.0107
GLU 790.0107
ALA 800.0102
ALA 810.0102
TRP 820.0098
LYS 830.0089
GLY 840.0098
VAL 850.0117
LEU 860.0121
THR 870.0128
GLU 880.0132
SER 890.0136
GLU 900.0138
ARG 910.0138
ILE 920.0120
SER 930.0116
ASP 940.0109
VAL 950.0098
HIS 960.0091
LYS 980.0150
ILE 990.0127
LYS 1000.0127
ASP 1010.0157
ASN 1020.0144
LEU 1030.0130
CYS 1040.0138
ASN 1050.0141
ASP 1060.0123
VAL 1070.0104
ASN 1080.0091
SER 1090.0082
GLN 1100.0090
ILE 1110.0070
LYS 1120.0058
THR 1130.0121
TRP 1140.0121
GLN 1150.0106
LYS 1160.0160
GLU 1170.0184
ASN 1180.0147
TYR 1190.0154
HIS 1200.0197
HIS 1210.0253
THR 1220.0319
LEU 1230.0436
GLN 1250.0262
ILE 1260.0182
LYS 1270.0146
GLU 1280.0068
ARG 1290.0088
LYS 1300.0160
ASP 1310.0134
LEU 1320.0122
GLU 1330.0140
ASP 1340.0173
LEU 1350.0172
PHE 1360.0141
LYS 1370.0123
LYS 1380.0134
ALA 1390.0116
GLN 1400.0064
LYS 1410.0093
PRO 1420.0093
TRP 1430.0109
ALA 1440.0122
LYS 1450.0167
LEU 1460.0182
LEU 1470.0149
ALA 1480.0179
LYS 1490.0207
VAL 1500.0193
GLU 1510.0176
LYS 1520.0140
ALA 1530.0125
LYS 1540.0140
ALA 1550.0090
ASP 1560.0061
TYR 1570.0080
HIS 1580.0062
SER 1590.0106
ALA 1600.0145
CYS 1610.0147
LYS 1620.0160
THR 1630.0176
GLU 1640.0182
ARG 1650.0196
SER 1660.0170
ALA 1670.0149
THR 1680.0147
ASN 1690.0130
GLN 1700.0151
GLU 1710.0140
ARG 1720.0143
ASN 1730.0186
ALA 1740.0149
ASN 1750.0153
ALA 1760.0236
ASP 1770.0148
SER 1780.0236
SER 1790.0230
LEU 1800.0220
SER 1810.0316
PRO 1820.0196
ASP 1830.0240
GLN 1840.0242
VAL 1850.0094
LYS 1860.0165
LYS 1870.0185
HIS 1890.0173
ASP 1900.0168
ARG 1910.0149
VAL 1920.0134
GLN 1930.0141
LYS 1940.0143
THR 1950.0169
LYS 1960.0163
ASP 1970.0192
GLN 1980.0197
VAL 1990.0160
GLN 2000.0218
LYS 2010.0211
CYS 2020.0130
ARG 2030.0177
GLU 2040.0203
LYS 2050.0125
TYR 2060.0154
GLU 2070.0210
GLN 2080.0173
ALA 2090.0188
ILE 2100.0210
ALA 2110.0213
GLU 2120.0228
ILE 2130.0184
THR 2140.0190
LYS 2150.0246
TYR 2160.0162
ASN 2170.0139
SER 2180.0157
VAL 2190.0109
TYR 2200.0086
ILE 2210.0087
GLU 2220.0094
ASP 2230.0107
THR 2250.0132
SER 2260.0162
VAL 2270.0143
PHE 2280.0113
GLU 2290.0133
LYS 2300.0128
CYS 2310.0079
GLN 2320.0078
THR 2330.0079
PHE 2340.0075
GLU 2350.0072
LYS 2360.0073
THR 2370.0084
ARG 2380.0077
LEU 2390.0073
GLN 2400.0080
PHE 2410.0087
PHE 2420.0076
LYS 2430.0073
GLU 2440.0096
ILE 2450.0085
LEU 2460.0083
PHE 2470.0106
ASN 2480.0108
VAL 2490.0120
HIS 2500.0118
SER 2510.0126
CYS 2520.0125
LEU 2530.0116
ASP 2540.0113
LEU 2550.0098
THR 2560.0102
LYS 2570.0112
VAL 2580.0115
GLN 2590.0152
SER 2600.0130
LEU 2610.0136
PRO 2620.0157
GLN 2630.0145
ILE 2640.0136
TYR 2650.0139
GLU 2660.0137
GLU 2670.0132
PHE 2680.0122
SER 2690.0114
HIS 2700.0132
THR 2710.0115
ILE 2720.0097
ASN 2730.0111
ASN 2740.0116
ALA 2750.0106
ASP 2760.0112
GLN 2770.0114
GLN 2780.0128
LYS 2790.0114
ASP 2800.0118
LEU 2810.0128
LYS 2820.0150
TRP 2830.0167
TRP 2840.0148
SER 2850.0142
ASN 2860.0175
ASN 2870.0159
HIS 2880.0103
GLY 2890.0104
ILE 2900.0123
ASN 2910.0165
ALA 2930.0304
ASN 2950.0344
TRP 2960.0239
PRO 2970.0198
SER 2980.0150

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.