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***  ENDOCYTOSIS 29-JUN-09 3I2W  ***

<R2> analysis for 2602230445411017275

---  normal mode 41  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1217
SER 140.0091
ASP 150.0093
SER 160.0082
PHE 170.0087
TRP 180.0064
GLU 190.0072
PRO 200.0055
GLY 210.0066
ASN 220.0079
TYR 230.0080
LYS 240.0085
ARG 250.0085
THR 260.0069
THR 270.0070
LYS 280.0074
ARG 290.0057
ILE 300.0032
GLU 310.0076
ASP 320.0117
GLY 330.0112
TYR 340.0144
LYS 350.0158
LEU 360.0160
CYS 370.0171
ASN 380.0175
ASP 390.0154
LEU 400.0125
GLN 410.0105
GLN 420.0113
LEU 430.0085
ILE 440.0047
GLN 450.0045
GLU 460.0060
ARG 470.0092
ALA 480.0120
ASP 490.0143
ILE 500.0166
GLU 510.0163
LYS 520.0196
GLY 530.0226
TYR 540.0180
ALA 550.0177
LYS 560.0227
SER 570.0198
LEU 580.0123
ARG 590.0106
THR 600.0105
TRP 610.0078
SER 620.0064
LYS 630.0090
LYS 640.0082
TRP 650.0136
GLY 660.0175
GLU 670.0220
LEU 680.0219
ILE 690.0192
GLU 700.0251
LYS 710.0318
GLY 720.0218
PRO 730.0139
GLU 740.0108
TYR 750.0105
GLY 760.0114
THR 770.0130
THR 780.0090
GLU 790.0131
ALA 800.0127
ALA 810.0105
TRP 820.0112
LYS 830.0133
GLY 840.0103
VAL 850.0078
LEU 860.0059
THR 870.0060
GLU 880.0044
SER 890.0045
GLU 900.0073
ARG 910.0074
ILE 920.0094
SER 930.0140
ASP 940.0155
VAL 950.0152
HIS 960.0163
LYS 980.0177
ILE 990.0146
LYS 1000.0153
ASP 1010.0161
ASN 1020.0138
LEU 1030.0081
CYS 1040.0060
ASN 1050.0093
ASP 1060.0110
VAL 1070.0078
ASN 1080.0093
SER 1090.0116
GLN 1100.0156
ILE 1110.0167
LYS 1120.0206
THR 1130.0225
TRP 1140.0198
GLN 1150.0195
LYS 1160.0221
GLU 1170.0203
ASN 1180.0135
TYR 1190.0082
HIS 1200.0027
HIS 1210.0126
THR 1220.0369
LEU 1230.0561
GLN 1250.0257
ILE 1260.0133
LYS 1270.0144
GLU 1280.0081
ARG 1290.0089
LYS 1300.0163
ASP 1310.0148
LEU 1320.0115
GLU 1330.0129
ASP 1340.0142
LEU 1350.0120
PHE 1360.0091
LYS 1370.0080
LYS 1380.0067
ALA 1390.0065
GLN 1400.0059
LYS 1410.0090
PRO 1420.0132
TRP 1430.0118
ALA 1440.0128
LYS 1450.0173
LEU 1460.0154
LEU 1470.0148
ALA 1480.0169
LYS 1490.0136
VAL 1500.0123
GLU 1510.0136
LYS 1520.0082
ALA 1530.0043
LYS 1540.0063
ALA 1550.0070
ASP 1560.0080
TYR 1570.0087
HIS 1580.0085
SER 1590.0124
ALA 1600.0139
CYS 1610.0108
LYS 1620.0132
THR 1630.0131
GLU 1640.0108
ARG 1650.0145
SER 1660.0125
ALA 1670.0096
THR 1680.0133
HIS 1890.0391
ASP 1900.0224
ARG 1910.0110
VAL 1920.0100
GLN 1930.0050
LYS 1940.0119
THR 1950.0119
LYS 1960.0107
ASP 1970.0129
GLN 1980.0151
VAL 1990.0135
GLN 2000.0129
LYS 2010.0116
CYS 2020.0086
ARG 2030.0071
GLU 2040.0071
LYS 2050.0066
TYR 2060.0050
GLU 2070.0074
GLN 2080.0111
ALA 2090.0117
ILE 2100.0142
ALA 2110.0145
GLU 2120.0146
ILE 2130.0136
THR 2140.0137
LYS 2150.0125
TYR 2160.0111
ASN 2170.0085
SER 2180.0082
VAL 2190.0098
TYR 2200.0078
ILE 2210.0081
GLU 2220.0092
ASP 2230.0080
THR 2250.0094
SER 2260.0094
VAL 2270.0095
PHE 2280.0096
GLU 2290.0089
LYS 2300.0089
CYS 2310.0050
GLN 2320.0051
THR 2330.0076
PHE 2340.0063
GLU 2350.0050
LYS 2360.0065
THR 2370.0112
ARG 2380.0119
LEU 2390.0102
GLN 2400.0099
PHE 2410.0128
PHE 2420.0124
LYS 2430.0099
GLU 2440.0098
ILE 2450.0096
LEU 2460.0067
PHE 2470.0061
ASN 2480.0059
VAL 2490.0058
HIS 2500.0064
SER 2510.0090
CYS 2520.0102
LEU 2530.0101
ASP 2540.0101
LEU 2550.0104
THR 2560.0088
LYS 2570.0121
VAL 2580.0169
GLN 2590.0227
SER 2600.0158
LEU 2610.0070
PRO 2620.0103
GLN 2630.0115
ILE 2640.0049
TYR 2650.0071
GLU 2660.0113
GLU 2670.0083
PHE 2680.0082
SER 2690.0115
HIS 2700.0101
THR 2710.0105
ILE 2720.0117
ASN 2730.0104
ASN 2740.0111
ALA 2750.0106
ASP 2760.0132
GLN 2770.0090
GLN 2780.0152
LYS 2790.0164
ASP 2800.0092
LEU 2810.0094
LYS 2820.0145
TRP 2830.0112
TRP 2840.0060
SER 2850.0085
ASN 2860.0100
ASN 2870.0067
HIS 2880.0019
GLY 2890.0059
ILE 2900.0097
ASN 2910.0135
ALA 2930.0131
ASN 2950.0161
TRP 2960.0137
PRO 2970.0155
SER 2980.0146
PHE 2990.0130
VAL 3000.0099
GLU 3010.0104
TYR 3020.0078
THR 3030.0070
SER 140.0121
ASP 150.0075
SER 160.0072
PHE 170.0053
TRP 180.0055
GLU 190.0063
PRO 200.0059
GLY 210.0072
ASN 220.0054
TYR 230.0060
LYS 240.0084
ARG 250.0075
THR 260.0101
THR 270.0122
LYS 280.0137
ARG 290.0131
ILE 300.0137
GLU 310.0155
ASP 320.0149
GLY 330.0149
TYR 340.0160
LYS 350.0152
LEU 360.0137
CYS 370.0141
ASN 380.0149
ASP 390.0139
LEU 400.0117
GLN 410.0103
GLN 420.0112
LEU 430.0105
ILE 440.0104
GLN 450.0117
GLU 460.0087
ARG 470.0099
ALA 480.0146
ASP 490.0168
ILE 500.0162
GLU 510.0144
LYS 520.0180
GLY 530.0211
TYR 540.0172
ALA 550.0155
LYS 560.0177
SER 570.0161
LEU 580.0120
ARG 590.0121
THR 600.0102
TRP 610.0077
SER 620.0101
LYS 630.0148
LYS 640.0122
TRP 650.0126
GLY 660.0151
GLU 670.0196
LEU 680.0179
ILE 690.0149
GLU 700.0186
LYS 710.0215
GLY 720.0175
PRO 730.0159
GLU 740.0119
TYR 750.0088
GLY 760.0060
THR 770.0067
THR 780.0083
GLU 790.0103
ALA 800.0088
ALA 810.0068
TRP 820.0083
LYS 830.0099
GLY 840.0079
VAL 850.0060
LEU 860.0085
THR 870.0103
GLU 880.0083
SER 890.0084
GLU 900.0110
ARG 910.0119
ILE 920.0109
SER 930.0129
ASP 940.0129
VAL 950.0122
HIS 960.0132
LYS 980.0159
ILE 990.0133
LYS 1000.0162
ASP 1010.0210
ASN 1020.0192
LEU 1030.0149
CYS 1040.0159
ASN 1050.0200
ASP 1060.0208
VAL 1070.0136
ASN 1080.0118
SER 1090.0113
GLN 1100.0131
ILE 1110.0126
LYS 1120.0139
THR 1130.0175
TRP 1140.0166
GLN 1150.0169
LYS 1160.0198
GLU 1170.0181
ASN 1180.0142
TYR 1190.0097
HIS 1200.0053
HIS 1210.0144
THR 1220.0668
LEU 1230.1217
GLN 1250.0403
ILE 1260.0194
LYS 1270.0136
GLU 1280.0071
ARG 1290.0097
LYS 1300.0085
ASP 1310.0096
LEU 1320.0097
GLU 1330.0102
ASP 1340.0102
LEU 1350.0083
PHE 1360.0066
LYS 1370.0053
LYS 1380.0039
ALA 1390.0029
GLN 1400.0050
LYS 1410.0056
PRO 1420.0098
TRP 1430.0104
ALA 1440.0094
LYS 1450.0100
LEU 1460.0121
LEU 1470.0103
ALA 1480.0115
LYS 1490.0113
VAL 1500.0115
GLU 1510.0109
LYS 1520.0123
ALA 1530.0124
LYS 1540.0105
ALA 1550.0078
ASP 1560.0092
TYR 1570.0099
HIS 1580.0059
SER 1590.0061
ALA 1600.0061
CYS 1610.0080
LYS 1620.0083
THR 1630.0101
GLU 1640.0096
ARG 1650.0117
SER 1660.0126
ALA 1670.0106
THR 1680.0108
ASN 1690.0073
GLN 1700.0036
GLU 1710.0088
ARG 1720.0161
ASN 1730.0159
ALA 1740.0151
ASN 1750.0179
ALA 1760.0180
ASP 1770.0204
SER 1780.0150
SER 1790.0311
LEU 1800.0210
SER 1810.0114
PRO 1820.0141
ASP 1830.0144
GLN 1840.0134
VAL 1850.0115
LYS 1860.0104
LYS 1870.0137
HIS 1890.0115
ASP 1900.0122
ARG 1910.0109
VAL 1920.0112
GLN 1930.0119
LYS 1940.0124
THR 1950.0089
LYS 1960.0084
ASP 1970.0069
GLN 1980.0062
VAL 1990.0092
GLN 2000.0142
LYS 2010.0147
CYS 2020.0128
ARG 2030.0153
GLU 2040.0189
LYS 2050.0188
TYR 2060.0151
GLU 2070.0133
GLN 2080.0173
ALA 2090.0176
ILE 2100.0137
ALA 2110.0144
GLU 2120.0174
ILE 2130.0161
THR 2140.0175
LYS 2150.0211
TYR 2160.0163
ASN 2170.0162
SER 2180.0169
VAL 2190.0123
TYR 2200.0100
ILE 2210.0125
GLU 2220.0114
ASP 2230.0066
THR 2250.0109
SER 2260.0125
VAL 2270.0107
PHE 2280.0117
GLU 2290.0152
LYS 2300.0170
CYS 2310.0150
GLN 2320.0140
THR 2330.0182
PHE 2340.0162
GLU 2350.0119
LYS 2360.0126
THR 2370.0127
ARG 2380.0110
LEU 2390.0083
GLN 2400.0088
PHE 2410.0091
PHE 2420.0086
LYS 2430.0101
GLU 2440.0104
ILE 2450.0102
LEU 2460.0112
PHE 2470.0123
ASN 2480.0127
VAL 2490.0125
HIS 2500.0115
SER 2510.0136
CYS 2520.0131
LEU 2530.0089
ASP 2540.0076
LEU 2550.0025
THR 2560.0064
LYS 2570.0091
VAL 2580.0057
GLN 2590.0078
SER 2600.0031
LEU 2610.0062
PRO 2620.0079
GLN 2630.0078
ILE 2640.0071
TYR 2650.0072
GLU 2660.0068
GLU 2670.0069
PHE 2680.0064
SER 2690.0060
HIS 2700.0055
THR 2710.0072
ILE 2720.0070
ASN 2730.0070
ASN 2740.0076
ALA 2750.0082
ASP 2760.0049
GLN 2770.0046
GLN 2780.0029
LYS 2790.0017
ASP 2800.0017
LEU 2810.0023
LYS 2820.0075
TRP 2830.0077
TRP 2840.0061
SER 2850.0099
ASN 2860.0126
ASN 2870.0114
HIS 2880.0084
GLY 2890.0094
ILE 2900.0115
ASN 2910.0172
ALA 2930.0115
ASN 2950.0133
TRP 2960.0118
PRO 2970.0161
SER 2980.0175

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.