CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  ENDOCYTOSIS 29-JUN-09 3I2W  ***

<R2> analysis for 2602230445411017275

---  normal mode 47  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0867
SER 140.0302
ASP 150.0212
SER 160.0111
PHE 170.0062
TRP 180.0126
GLU 190.0179
PRO 200.0147
GLY 210.0131
ASN 220.0088
TYR 230.0079
LYS 240.0141
ARG 250.0180
THR 260.0130
THR 270.0132
LYS 280.0141
ARG 290.0117
ILE 300.0103
GLU 310.0104
ASP 320.0061
GLY 330.0069
TYR 340.0056
LYS 350.0028
LEU 360.0051
CYS 370.0077
ASN 380.0068
ASP 390.0092
LEU 400.0084
GLN 410.0082
GLN 420.0109
LEU 430.0091
ILE 440.0069
GLN 450.0096
GLU 460.0113
ARG 470.0071
ALA 480.0079
ASP 490.0107
ILE 500.0087
GLU 510.0080
LYS 520.0088
GLY 530.0053
TYR 540.0052
ALA 550.0055
LYS 560.0045
SER 570.0038
LEU 580.0038
ARG 590.0041
THR 600.0050
TRP 610.0045
SER 620.0036
LYS 630.0041
LYS 640.0048
TRP 650.0046
GLY 660.0031
GLU 670.0036
LEU 680.0043
ILE 690.0026
GLU 700.0014
LYS 710.0036
GLY 720.0030
PRO 730.0015
GLU 740.0017
TYR 750.0030
GLY 760.0042
THR 770.0079
THR 780.0055
GLU 790.0045
ALA 800.0069
ALA 810.0072
TRP 820.0056
LYS 830.0046
GLY 840.0055
VAL 850.0054
LEU 860.0025
THR 870.0021
GLU 880.0028
SER 890.0016
GLU 900.0019
ARG 910.0016
ILE 920.0019
SER 930.0031
ASP 940.0035
VAL 950.0045
HIS 960.0045
LYS 980.0108
ILE 990.0072
LYS 1000.0088
ASP 1010.0104
ASN 1020.0063
LEU 1030.0051
CYS 1040.0088
ASN 1050.0091
ASP 1060.0056
VAL 1070.0057
ASN 1080.0082
SER 1090.0088
GLN 1100.0090
ILE 1110.0095
LYS 1120.0116
THR 1130.0125
TRP 1140.0110
GLN 1150.0092
LYS 1160.0118
GLU 1170.0140
ASN 1180.0116
TYR 1190.0091
HIS 1200.0090
HIS 1210.0072
THR 1220.0089
LEU 1230.0088
GLN 1250.0098
ILE 1260.0098
LYS 1270.0104
GLU 1280.0103
ARG 1290.0114
LYS 1300.0109
ASP 1310.0078
LEU 1320.0077
GLU 1330.0088
ASP 1340.0066
LEU 1350.0043
PHE 1360.0049
LYS 1370.0108
LYS 1380.0118
ALA 1390.0122
GLN 1400.0124
LYS 1410.0114
PRO 1420.0114
TRP 1430.0121
ALA 1440.0148
LYS 1450.0098
LEU 1460.0102
LEU 1470.0154
ALA 1480.0221
LYS 1490.0213
VAL 1500.0202
GLU 1510.0219
LYS 1520.0244
ALA 1530.0222
LYS 1540.0203
ALA 1550.0190
ASP 1560.0133
TYR 1570.0147
HIS 1580.0240
SER 1590.0257
ALA 1600.0171
CYS 1610.0145
LYS 1620.0252
THR 1630.0268
GLU 1640.0246
ARG 1650.0326
SER 1660.0362
ALA 1670.0218
THR 1680.0364
HIS 1890.0867
ASP 1900.0396
ARG 1910.0190
VAL 1920.0123
GLN 1930.0311
LYS 1940.0453
THR 1950.0255
LYS 1960.0236
ASP 1970.0278
GLN 1980.0186
VAL 1990.0114
GLN 2000.0054
LYS 2010.0039
CYS 2020.0109
ARG 2030.0167
GLU 2040.0195
LYS 2050.0207
TYR 2060.0220
GLU 2070.0253
GLN 2080.0226
ALA 2090.0208
ILE 2100.0168
ALA 2110.0132
GLU 2120.0099
ILE 2130.0088
THR 2140.0131
LYS 2150.0126
TYR 2160.0176
ASN 2170.0228
SER 2180.0257
VAL 2190.0218
TYR 2200.0195
ILE 2210.0220
GLU 2220.0206
ASP 2230.0152
THR 2250.0078
SER 2260.0113
VAL 2270.0062
PHE 2280.0088
GLU 2290.0113
LYS 2300.0099
CYS 2310.0101
GLN 2320.0128
THR 2330.0109
PHE 2340.0090
GLU 2350.0077
LYS 2360.0082
THR 2370.0059
ARG 2380.0034
LEU 2390.0016
GLN 2400.0053
PHE 2410.0077
PHE 2420.0075
LYS 2430.0104
GLU 2440.0100
ILE 2450.0094
LEU 2460.0114
PHE 2470.0122
ASN 2480.0103
VAL 2490.0091
HIS 2500.0086
SER 2510.0118
CYS 2520.0080
LEU 2530.0059
ASP 2540.0115
LEU 2550.0154
THR 2560.0247
LYS 2570.0230
VAL 2580.0140
GLN 2590.0192
SER 2600.0100
LEU 2610.0099
PRO 2620.0121
GLN 2630.0085
ILE 2640.0075
TYR 2650.0100
GLU 2660.0106
GLU 2670.0100
PHE 2680.0099
SER 2690.0132
HIS 2700.0141
THR 2710.0118
ILE 2720.0116
ASN 2730.0130
ASN 2740.0127
ALA 2750.0092
ASP 2760.0101
GLN 2770.0083
GLN 2780.0114
LYS 2790.0087
ASP 2800.0056
LEU 2810.0059
LYS 2820.0041
TRP 2830.0030
TRP 2840.0014
SER 2850.0007
ASN 2860.0012
ASN 2870.0023
HIS 2880.0021
GLY 2890.0025
ILE 2900.0030
ASN 2910.0038
ALA 2930.0048
ASN 2950.0054
TRP 2960.0038
PRO 2970.0056
SER 2980.0097
PHE 2990.0070
VAL 3000.0063
GLU 3010.0016
TYR 3020.0034
THR 3030.0079
SER 140.0069
ASP 150.0065
SER 160.0050
PHE 170.0043
TRP 180.0046
GLU 190.0049
PRO 200.0053
GLY 210.0051
ASN 220.0052
TYR 230.0047
LYS 240.0032
ARG 250.0033
THR 260.0034
THR 270.0030
LYS 280.0026
ARG 290.0034
ILE 300.0049
GLU 310.0048
ASP 320.0041
GLY 330.0046
TYR 340.0067
LYS 350.0053
LEU 360.0029
CYS 370.0033
ASN 380.0066
ASP 390.0064
LEU 400.0061
GLN 410.0079
GLN 420.0085
LEU 430.0076
ILE 440.0081
GLN 450.0095
GLU 460.0082
ARG 470.0051
ALA 480.0063
ASP 490.0062
ILE 500.0028
GLU 510.0033
LYS 520.0029
GLY 530.0071
TYR 540.0080
ALA 550.0102
LYS 560.0111
SER 570.0104
LEU 580.0089
ARG 590.0101
THR 600.0127
TRP 610.0104
SER 620.0067
LYS 630.0101
LYS 640.0148
TRP 650.0130
GLY 660.0146
GLU 670.0196
LEU 680.0182
ILE 690.0157
GLU 700.0223
LYS 710.0298
GLY 720.0156
PRO 730.0065
GLU 740.0109
TYR 750.0102
GLY 760.0084
THR 770.0160
THR 780.0119
GLU 790.0125
ALA 800.0184
ALA 810.0161
TRP 820.0126
LYS 830.0139
GLY 840.0134
VAL 850.0081
LEU 860.0053
THR 870.0035
GLU 880.0027
SER 890.0053
GLU 900.0082
ARG 910.0095
ILE 920.0106
SER 930.0117
ASP 940.0132
VAL 950.0119
HIS 960.0092
LYS 980.0044
ILE 990.0039
LYS 1000.0051
ASP 1010.0110
ASN 1020.0116
LEU 1030.0104
CYS 1040.0148
ASN 1050.0190
ASP 1060.0180
VAL 1070.0133
ASN 1080.0121
SER 1090.0128
GLN 1100.0076
ILE 1110.0052
LYS 1120.0105
THR 1130.0069
TRP 1140.0063
GLN 1150.0084
LYS 1160.0179
GLU 1170.0189
ASN 1180.0154
TYR 1190.0148
HIS 1200.0172
HIS 1210.0157
THR 1220.0072
LEU 1230.0306
GLN 1250.0081
ILE 1260.0066
LYS 1270.0051
GLU 1280.0090
ARG 1290.0055
LYS 1300.0041
ASP 1310.0086
LEU 1320.0083
GLU 1330.0072
ASP 1340.0100
LEU 1350.0102
PHE 1360.0078
LYS 1370.0092
LYS 1380.0107
ALA 1390.0097
GLN 1400.0072
LYS 1410.0081
PRO 1420.0061
TRP 1430.0056
ALA 1440.0083
LYS 1450.0100
LEU 1460.0062
LEU 1470.0041
ALA 1480.0069
LYS 1490.0049
VAL 1500.0012
GLU 1510.0035
LYS 1520.0027
ALA 1530.0029
LYS 1540.0043
ALA 1550.0042
ASP 1560.0052
TYR 1570.0041
HIS 1580.0026
SER 1590.0031
ALA 1600.0024
CYS 1610.0030
LYS 1620.0046
THR 1630.0036
GLU 1640.0049
ARG 1650.0083
SER 1660.0074
ALA 1670.0054
THR 1680.0044
ASN 1690.0031
GLN 1700.0028
GLU 1710.0036
ARG 1720.0078
ASN 1730.0097
ALA 1740.0064
ASN 1750.0103
ALA 1760.0117
ASP 1770.0069
SER 1780.0062
SER 1790.0156
LEU 1800.0061
SER 1810.0043
PRO 1820.0097
ASP 1830.0121
GLN 1840.0080
VAL 1850.0041
LYS 1860.0058
LYS 1870.0071
HIS 1890.0072
ASP 1900.0073
ARG 1910.0054
VAL 1920.0053
GLN 1930.0045
LYS 1940.0026
THR 1950.0033
LYS 1960.0073
ASP 1970.0088
GLN 1980.0073
VAL 1990.0071
GLN 2000.0096
LYS 2010.0104
CYS 2020.0075
ARG 2030.0061
GLU 2040.0056
LYS 2050.0068
TYR 2060.0045
GLU 2070.0041
GLN 2080.0061
ALA 2090.0069
ILE 2100.0063
ALA 2110.0114
GLU 2120.0111
ILE 2130.0064
THR 2140.0092
LYS 2150.0117
TYR 2160.0036
ASN 2170.0028
SER 2180.0042
VAL 2190.0043
TYR 2200.0049
ILE 2210.0067
GLU 2220.0100
ASP 2230.0092
THR 2250.0071
SER 2260.0082
VAL 2270.0070
PHE 2280.0035
GLU 2290.0039
LYS 2300.0033
CYS 2310.0030
GLN 2320.0036
THR 2330.0051
PHE 2340.0084
GLU 2350.0064
LYS 2360.0075
THR 2370.0077
ARG 2380.0046
LEU 2390.0052
GLN 2400.0076
PHE 2410.0047
PHE 2420.0049
LYS 2430.0094
GLU 2440.0108
ILE 2450.0101
LEU 2460.0110
PHE 2470.0132
ASN 2480.0139
VAL 2490.0115
HIS 2500.0111
SER 2510.0114
CYS 2520.0094
LEU 2530.0090
ASP 2540.0086
LEU 2550.0104
THR 2560.0101
LYS 2570.0140
VAL 2580.0319
GLN 2590.0546
SER 2600.0374
LEU 2610.0235
PRO 2620.0290
GLN 2630.0251
ILE 2640.0123
TYR 2650.0148
GLU 2660.0203
GLU 2670.0109
PHE 2680.0104
SER 2690.0179
HIS 2700.0226
THR 2710.0202
ILE 2720.0175
ASN 2730.0179
ASN 2740.0198
ALA 2750.0158
ASP 2760.0050
GLN 2770.0042
GLN 2780.0163
LYS 2790.0145
ASP 2800.0119
LEU 2810.0168
LYS 2820.0298
TRP 2830.0318
TRP 2840.0245
SER 2850.0247
ASN 2860.0342
ASN 2870.0330
HIS 2880.0175
GLY 2890.0125
ILE 2900.0139
ASN 2910.0233
ALA 2930.0222
ASN 2950.0499
TRP 2960.0320
PRO 2970.0274
SER 2980.0217

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.