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***  ENDOCYTOSIS 29-JUN-09 3I2W  ***

<R2> analysis for 2602230445411017275

---  normal mode 49  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0719
SER 140.0142
ASP 150.0120
SER 160.0110
PHE 170.0086
TRP 180.0084
GLU 190.0089
PRO 200.0071
GLY 210.0065
ASN 220.0064
TYR 230.0034
LYS 240.0031
ARG 250.0051
THR 260.0038
THR 270.0037
LYS 280.0054
ARG 290.0058
ILE 300.0071
GLU 310.0084
ASP 320.0093
GLY 330.0105
TYR 340.0109
LYS 350.0101
LEU 360.0098
CYS 370.0095
ASN 380.0088
ASP 390.0099
LEU 400.0088
GLN 410.0084
GLN 420.0092
LEU 430.0102
ILE 440.0101
GLN 450.0103
GLU 460.0116
ARG 470.0105
ALA 480.0101
ASP 490.0120
ILE 500.0112
GLU 510.0090
LYS 520.0106
GLY 530.0087
TYR 540.0075
ALA 550.0070
LYS 560.0079
SER 570.0082
LEU 580.0063
ARG 590.0066
THR 600.0090
TRP 610.0083
SER 620.0071
LYS 630.0082
LYS 640.0073
TRP 650.0058
GLY 660.0069
GLU 670.0069
LEU 680.0060
ILE 690.0043
GLU 700.0092
LYS 710.0113
GLY 720.0099
PRO 730.0068
GLU 740.0066
TYR 750.0069
GLY 760.0087
THR 770.0125
THR 780.0112
GLU 790.0083
ALA 800.0127
ALA 810.0131
TRP 820.0078
LYS 830.0092
GLY 840.0121
VAL 850.0102
LEU 860.0100
THR 870.0121
GLU 880.0122
SER 890.0081
GLU 900.0092
ARG 910.0144
ILE 920.0089
SER 930.0070
ASP 940.0082
VAL 950.0083
HIS 960.0035
LYS 980.0078
ILE 990.0050
LYS 1000.0077
ASP 1010.0089
ASN 1020.0065
LEU 1030.0078
CYS 1040.0108
ASN 1050.0110
ASP 1060.0108
VAL 1070.0096
ASN 1080.0101
SER 1090.0119
GLN 1100.0108
ILE 1110.0096
LYS 1120.0112
THR 1130.0116
TRP 1140.0100
GLN 1150.0097
LYS 1160.0105
GLU 1170.0127
ASN 1180.0125
TYR 1190.0160
HIS 1200.0183
HIS 1210.0198
THR 1220.0325
LEU 1230.0511
GLN 1250.0200
ILE 1260.0156
LYS 1270.0163
GLU 1280.0118
ARG 1290.0088
LYS 1300.0112
ASP 1310.0102
LEU 1320.0061
GLU 1330.0049
ASP 1340.0067
LEU 1350.0049
PHE 1360.0021
LYS 1370.0038
LYS 1380.0045
ALA 1390.0041
GLN 1400.0063
LYS 1410.0052
PRO 1420.0059
TRP 1430.0084
ALA 1440.0061
LYS 1450.0062
LEU 1460.0076
LEU 1470.0050
ALA 1480.0047
LYS 1490.0080
VAL 1500.0065
GLU 1510.0071
LYS 1520.0093
ALA 1530.0083
LYS 1540.0078
ALA 1550.0071
ASP 1560.0058
TYR 1570.0050
HIS 1580.0051
SER 1590.0036
ALA 1600.0056
CYS 1610.0037
LYS 1620.0031
THR 1630.0050
GLU 1640.0087
ARG 1650.0106
SER 1660.0102
ALA 1670.0100
THR 1680.0181
HIS 1890.0279
ASP 1900.0103
ARG 1910.0156
VAL 1920.0138
GLN 1930.0075
LYS 1940.0136
THR 1950.0117
LYS 1960.0117
ASP 1970.0112
GLN 1980.0079
VAL 1990.0057
GLN 2000.0046
LYS 2010.0047
CYS 2020.0034
ARG 2030.0058
GLU 2040.0063
LYS 2050.0070
TYR 2060.0080
GLU 2070.0101
GLN 2080.0104
ALA 2090.0088
ILE 2100.0083
ALA 2110.0096
GLU 2120.0121
ILE 2130.0102
THR 2140.0103
LYS 2150.0147
TYR 2160.0123
ASN 2170.0124
SER 2180.0143
VAL 2190.0120
TYR 2200.0106
ILE 2210.0122
GLU 2220.0111
ASP 2230.0091
THR 2250.0094
SER 2260.0086
VAL 2270.0073
PHE 2280.0067
GLU 2290.0079
LYS 2300.0076
CYS 2310.0049
GLN 2320.0048
THR 2330.0047
PHE 2340.0026
GLU 2350.0028
LYS 2360.0020
THR 2370.0035
ARG 2380.0017
LEU 2390.0016
GLN 2400.0065
PHE 2410.0052
PHE 2420.0034
LYS 2430.0120
GLU 2440.0125
ILE 2450.0079
LEU 2460.0085
PHE 2470.0118
ASN 2480.0095
VAL 2490.0068
HIS 2500.0074
SER 2510.0063
CYS 2520.0045
LEU 2530.0058
ASP 2540.0136
LEU 2550.0213
THR 2560.0249
LYS 2570.0312
VAL 2580.0321
GLN 2590.0339
SER 2600.0341
LEU 2610.0310
PRO 2620.0300
GLN 2630.0334
ILE 2640.0300
TYR 2650.0264
GLU 2660.0299
GLU 2670.0321
PHE 2680.0261
SER 2690.0253
HIS 2700.0319
THR 2710.0290
ILE 2720.0254
ASN 2730.0305
ASN 2740.0301
ALA 2750.0241
ASP 2760.0198
GLN 2770.0179
GLN 2780.0199
LYS 2790.0137
ASP 2800.0114
LEU 2810.0124
LYS 2820.0118
TRP 2830.0113
TRP 2840.0110
SER 2850.0117
ASN 2860.0124
ASN 2870.0142
HIS 2880.0139
GLY 2890.0116
ILE 2900.0099
ASN 2910.0120
ALA 2930.0268
ASN 2950.0205
TRP 2960.0133
PRO 2970.0071
SER 2980.0112
PHE 2990.0112
VAL 3000.0111
GLU 3010.0085
TYR 3020.0085
THR 3030.0117
SER 140.0282
ASP 150.0257
SER 160.0208
PHE 170.0139
TRP 180.0135
GLU 190.0152
PRO 200.0115
GLY 210.0108
ASN 220.0129
TYR 230.0051
LYS 240.0089
ARG 250.0124
THR 260.0089
THR 270.0097
LYS 280.0107
ARG 290.0090
ILE 300.0111
GLU 310.0145
ASP 320.0108
GLY 330.0113
TYR 340.0149
LYS 350.0130
LEU 360.0112
CYS 370.0124
ASN 380.0111
ASP 390.0104
LEU 400.0098
GLN 410.0103
GLN 420.0095
LEU 430.0088
ILE 440.0110
GLN 450.0114
GLU 460.0105
ARG 470.0093
ALA 480.0105
ASP 490.0123
ILE 500.0105
GLU 510.0093
LYS 520.0114
GLY 530.0144
TYR 540.0119
ALA 550.0110
LYS 560.0157
SER 570.0163
LEU 580.0135
ARG 590.0151
THR 600.0183
TRP 610.0161
SER 620.0158
LYS 630.0185
LYS 640.0155
TRP 650.0148
GLY 660.0194
GLU 670.0194
LEU 680.0158
ILE 690.0146
GLU 700.0220
LYS 710.0230
GLY 720.0164
PRO 730.0135
GLU 740.0082
TYR 750.0079
GLY 760.0075
THR 770.0092
THR 780.0064
GLU 790.0089
ALA 800.0103
ALA 810.0097
TRP 820.0077
LYS 830.0081
GLY 840.0113
VAL 850.0082
LEU 860.0074
THR 870.0061
GLU 880.0053
SER 890.0067
GLU 900.0065
ARG 910.0023
ILE 920.0028
SER 930.0062
ASP 940.0041
VAL 950.0023
HIS 960.0054
LYS 980.0070
ILE 990.0050
LYS 1000.0098
ASP 1010.0130
ASN 1020.0111
LEU 1030.0117
CYS 1040.0149
ASN 1050.0164
ASP 1060.0158
VAL 1070.0130
ASN 1080.0136
SER 1090.0162
GLN 1100.0157
ILE 1110.0144
LYS 1120.0156
THR 1130.0224
TRP 1140.0182
GLN 1150.0185
LYS 1160.0276
GLU 1170.0283
ASN 1180.0238
TYR 1190.0292
HIS 1200.0380
HIS 1210.0467
THR 1220.0640
LEU 1230.0719
GLN 1250.0431
ILE 1260.0341
LYS 1270.0343
GLU 1280.0243
ARG 1290.0206
LYS 1300.0261
ASP 1310.0226
LEU 1320.0166
GLU 1330.0148
ASP 1340.0166
LEU 1350.0158
PHE 1360.0090
LYS 1370.0104
LYS 1380.0180
ALA 1390.0154
GLN 1400.0149
LYS 1410.0173
PRO 1420.0162
TRP 1430.0124
ALA 1440.0121
LYS 1450.0117
LEU 1460.0055
LEU 1470.0052
ALA 1480.0065
LYS 1490.0070
VAL 1500.0083
GLU 1510.0087
LYS 1520.0106
ALA 1530.0113
LYS 1540.0110
ALA 1550.0107
ASP 1560.0109
TYR 1570.0092
HIS 1580.0089
SER 1590.0109
ALA 1600.0059
CYS 1610.0069
LYS 1620.0117
THR 1630.0096
GLU 1640.0122
ARG 1650.0154
SER 1660.0128
ALA 1670.0116
THR 1680.0080
ASN 1690.0096
GLN 1700.0146
GLU 1710.0093
ARG 1720.0116
ASN 1730.0203
ALA 1740.0146
ASN 1750.0164
ALA 1760.0287
ASP 1770.0136
SER 1780.0182
SER 1790.0213
LEU 1800.0104
SER 1810.0165
PRO 1820.0162
ASP 1830.0073
GLN 1840.0050
VAL 1850.0120
LYS 1860.0120
LYS 1870.0120
HIS 1890.0075
ASP 1900.0071
ARG 1910.0108
VAL 1920.0091
GLN 1930.0093
LYS 1940.0106
THR 1950.0093
LYS 1960.0102
ASP 1970.0090
GLN 1980.0041
VAL 1990.0042
GLN 2000.0034
LYS 2010.0052
CYS 2020.0080
ARG 2030.0080
GLU 2040.0085
LYS 2050.0114
TYR 2060.0115
GLU 2070.0103
GLN 2080.0120
ALA 2090.0113
ILE 2100.0110
ALA 2110.0157
GLU 2120.0130
ILE 2130.0105
THR 2140.0163
LYS 2150.0203
TYR 2160.0155
ASN 2170.0180
SER 2180.0226
VAL 2190.0212
TYR 2200.0185
ILE 2210.0194
GLU 2220.0183
ASP 2230.0176
THR 2250.0088
SER 2260.0085
VAL 2270.0086
PHE 2280.0085
GLU 2290.0078
LYS 2300.0084
CYS 2310.0102
GLN 2320.0086
THR 2330.0095
PHE 2340.0080
GLU 2350.0058
LYS 2360.0085
THR 2370.0082
ARG 2380.0037
LEU 2390.0058
GLN 2400.0100
PHE 2410.0040
PHE 2420.0033
LYS 2430.0150
GLU 2440.0138
ILE 2450.0068
LEU 2460.0110
PHE 2470.0144
ASN 2480.0103
VAL 2490.0107
HIS 2500.0139
SER 2510.0118
CYS 2520.0074
LEU 2530.0098
ASP 2540.0167
LEU 2550.0202
THR 2560.0249
LYS 2570.0226
VAL 2580.0217
GLN 2590.0250
SER 2600.0233
LEU 2610.0222
PRO 2620.0239
GLN 2630.0247
ILE 2640.0177
TYR 2650.0152
GLU 2660.0179
GLU 2670.0196
PHE 2680.0145
SER 2690.0125
HIS 2700.0221
THR 2710.0204
ILE 2720.0169
ASN 2730.0223
ASN 2740.0240
ALA 2750.0172
ASP 2760.0104
GLN 2770.0076
GLN 2780.0076
LYS 2790.0055
ASP 2800.0036
LEU 2810.0039
LYS 2820.0049
TRP 2830.0041
TRP 2840.0045
SER 2850.0063
ASN 2860.0056
ASN 2870.0054
HIS 2880.0067
GLY 2890.0074
ILE 2900.0082
ASN 2910.0094
ALA 2930.0096
ASN 2950.0083
TRP 2960.0090
PRO 2970.0088
SER 2980.0093

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.