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***  ENDOCYTOSIS 29-JUN-09 3I2W  ***

<R2> analysis for 2602230445411017275

---  normal mode 60  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0506
SER 140.0439
ASP 150.0312
SER 160.0261
PHE 170.0130
TRP 180.0125
GLU 190.0148
PRO 200.0107
GLY 210.0105
ASN 220.0106
TYR 230.0073
LYS 240.0101
ARG 250.0096
THR 260.0095
THR 270.0118
LYS 280.0115
ARG 290.0058
ILE 300.0056
GLU 310.0052
ASP 320.0063
GLY 330.0036
TYR 340.0052
LYS 350.0087
LEU 360.0070
CYS 370.0071
ASN 380.0107
ASP 390.0089
LEU 400.0048
GLN 410.0058
GLN 420.0064
LEU 430.0045
ILE 440.0059
GLN 450.0087
GLU 460.0090
ARG 470.0083
ALA 480.0115
ASP 490.0162
ILE 500.0114
GLU 510.0074
LYS 520.0131
GLY 530.0087
TYR 540.0063
ALA 550.0050
LYS 560.0067
SER 570.0080
LEU 580.0081
ARG 590.0078
THR 600.0084
TRP 610.0067
SER 620.0076
LYS 630.0083
LYS 640.0050
TRP 650.0030
GLY 660.0061
GLU 670.0072
LEU 680.0052
ILE 690.0025
GLU 700.0061
LYS 710.0095
GLY 720.0062
PRO 730.0059
GLU 740.0060
TYR 750.0062
GLY 760.0064
THR 770.0081
THR 780.0071
GLU 790.0054
ALA 800.0049
ALA 810.0055
TRP 820.0050
LYS 830.0029
GLY 840.0044
VAL 850.0055
LEU 860.0071
THR 870.0082
GLU 880.0085
SER 890.0096
GLU 900.0110
ARG 910.0105
ILE 920.0111
SER 930.0106
ASP 940.0120
VAL 950.0111
HIS 960.0103
LYS 980.0227
ILE 990.0142
LYS 1000.0141
ASP 1010.0224
ASN 1020.0191
LEU 1030.0103
CYS 1040.0131
ASN 1050.0170
ASP 1060.0145
VAL 1070.0071
ASN 1080.0026
SER 1090.0030
GLN 1100.0084
ILE 1110.0068
LYS 1120.0123
THR 1130.0154
TRP 1140.0107
GLN 1150.0095
LYS 1160.0203
GLU 1170.0205
ASN 1180.0102
TYR 1190.0058
HIS 1200.0103
HIS 1210.0098
THR 1220.0202
LEU 1230.0291
GLN 1250.0049
ILE 1260.0040
LYS 1270.0106
GLU 1280.0137
ARG 1290.0142
LYS 1300.0179
ASP 1310.0178
LEU 1320.0163
GLU 1330.0174
ASP 1340.0149
LEU 1350.0117
PHE 1360.0083
LYS 1370.0116
LYS 1380.0172
ALA 1390.0198
GLN 1400.0145
LYS 1410.0236
PRO 1420.0246
TRP 1430.0115
ALA 1440.0163
LYS 1450.0163
LEU 1460.0128
LEU 1470.0136
ALA 1480.0199
LYS 1490.0237
VAL 1500.0130
GLU 1510.0230
LYS 1520.0269
ALA 1530.0183
LYS 1540.0158
ALA 1550.0101
ASP 1560.0116
TYR 1570.0103
HIS 1580.0054
SER 1590.0113
ALA 1600.0096
CYS 1610.0112
LYS 1620.0256
THR 1630.0265
GLU 1640.0185
ARG 1650.0181
SER 1660.0228
ALA 1670.0152
THR 1680.0165
HIS 1890.0342
ASP 1900.0395
ARG 1910.0156
VAL 1920.0064
GLN 1930.0236
LYS 1940.0209
THR 1950.0120
LYS 1960.0165
ASP 1970.0100
GLN 1980.0173
VAL 1990.0130
GLN 2000.0241
LYS 2010.0263
CYS 2020.0163
ARG 2030.0202
GLU 2040.0181
LYS 2050.0133
TYR 2060.0115
GLU 2070.0151
GLN 2080.0165
ALA 2090.0168
ILE 2100.0178
ALA 2110.0290
GLU 2120.0266
ILE 2130.0136
THR 2140.0192
LYS 2150.0217
TYR 2160.0117
ASN 2170.0094
SER 2180.0184
VAL 2190.0257
TYR 2200.0181
ILE 2210.0195
GLU 2220.0291
ASP 2230.0214
THR 2250.0054
SER 2260.0038
VAL 2270.0049
PHE 2280.0077
GLU 2290.0100
LYS 2300.0127
CYS 2310.0104
GLN 2320.0093
THR 2330.0134
PHE 2340.0081
GLU 2350.0051
LYS 2360.0059
THR 2370.0022
ARG 2380.0022
LEU 2390.0032
GLN 2400.0027
PHE 2410.0035
PHE 2420.0035
LYS 2430.0079
GLU 2440.0084
ILE 2450.0067
LEU 2460.0073
PHE 2470.0083
ASN 2480.0084
VAL 2490.0072
HIS 2500.0061
SER 2510.0053
CYS 2520.0087
LEU 2530.0079
ASP 2540.0075
LEU 2550.0084
THR 2560.0070
LYS 2570.0086
VAL 2580.0170
GLN 2590.0270
SER 2600.0173
LEU 2610.0078
PRO 2620.0051
GLN 2630.0070
ILE 2640.0069
TYR 2650.0030
GLU 2660.0034
GLU 2670.0052
PHE 2680.0033
SER 2690.0048
HIS 2700.0084
THR 2710.0071
ILE 2720.0058
ASN 2730.0086
ASN 2740.0093
ALA 2750.0073
ASP 2760.0100
GLN 2770.0095
GLN 2780.0106
LYS 2790.0098
ASP 2800.0084
LEU 2810.0083
LYS 2820.0082
TRP 2830.0069
TRP 2840.0053
SER 2850.0053
ASN 2860.0036
ASN 2870.0035
HIS 2880.0026
GLY 2890.0048
ILE 2900.0070
ASN 2910.0085
ALA 2930.0132
ASN 2950.0077
TRP 2960.0043
PRO 2970.0042
SER 2980.0123
PHE 2990.0082
VAL 3000.0144
GLU 3010.0204
TYR 3020.0184
THR 3030.0236
SER 140.0248
ASP 150.0197
SER 160.0126
PHE 170.0082
TRP 180.0109
GLU 190.0133
PRO 200.0122
GLY 210.0103
ASN 220.0087
TYR 230.0025
LYS 240.0017
ARG 250.0017
THR 260.0030
THR 270.0045
LYS 280.0060
ARG 290.0063
ILE 300.0048
GLU 310.0049
ASP 320.0049
GLY 330.0045
TYR 340.0031
LYS 350.0053
LEU 360.0060
CYS 370.0053
ASN 380.0059
ASP 390.0053
LEU 400.0052
GLN 410.0043
GLN 420.0038
LEU 430.0030
ILE 440.0023
GLN 450.0034
GLU 460.0033
ARG 470.0045
ALA 480.0053
ASP 490.0050
ILE 500.0037
GLU 510.0047
LYS 520.0047
GLY 530.0076
TYR 540.0059
ALA 550.0103
LYS 560.0214
SER 570.0176
LEU 580.0130
ARG 590.0174
THR 600.0190
TRP 610.0142
SER 620.0118
LYS 630.0133
LYS 640.0078
TRP 650.0028
GLY 660.0116
GLU 670.0159
LEU 680.0187
ILE 690.0153
GLU 700.0296
LYS 710.0459
GLY 720.0275
PRO 730.0114
GLU 740.0108
TYR 750.0112
GLY 760.0110
THR 770.0133
THR 780.0088
GLU 790.0097
ALA 800.0109
ALA 810.0093
TRP 820.0062
LYS 830.0066
GLY 840.0089
VAL 850.0059
LEU 860.0062
THR 870.0070
GLU 880.0060
SER 890.0085
GLU 900.0105
ARG 910.0098
ILE 920.0079
SER 930.0090
ASP 940.0124
VAL 950.0051
HIS 960.0052
LYS 980.0047
ILE 990.0041
LYS 1000.0039
ASP 1010.0060
ASN 1020.0045
LEU 1030.0034
CYS 1040.0049
ASN 1050.0074
ASP 1060.0071
VAL 1070.0058
ASN 1080.0052
SER 1090.0053
GLN 1100.0058
ILE 1110.0056
LYS 1120.0060
THR 1130.0056
TRP 1140.0031
GLN 1150.0031
LYS 1160.0069
GLU 1170.0080
ASN 1180.0067
TYR 1190.0073
HIS 1200.0129
HIS 1210.0153
THR 1220.0234
LEU 1230.0343
GLN 1250.0121
ILE 1260.0097
LYS 1270.0136
GLU 1280.0107
ARG 1290.0105
LYS 1300.0127
ASP 1310.0091
LEU 1320.0073
GLU 1330.0079
ASP 1340.0082
LEU 1350.0066
PHE 1360.0034
LYS 1370.0072
LYS 1380.0085
ALA 1390.0103
GLN 1400.0098
LYS 1410.0104
PRO 1420.0089
TRP 1430.0083
ALA 1440.0093
LYS 1450.0102
LEU 1460.0060
LEU 1470.0040
ALA 1480.0046
LYS 1490.0075
VAL 1500.0076
GLU 1510.0072
LYS 1520.0125
ALA 1530.0087
LYS 1540.0080
ALA 1550.0080
ASP 1560.0055
TYR 1570.0058
HIS 1580.0099
SER 1590.0081
ALA 1600.0091
CYS 1610.0111
LYS 1620.0128
THR 1630.0124
GLU 1640.0068
ARG 1650.0151
SER 1660.0181
ALA 1670.0087
THR 1680.0057
ASN 1690.0067
GLN 1700.0118
GLU 1710.0069
ARG 1720.0114
ASN 1730.0152
ALA 1740.0071
ASN 1750.0076
ALA 1760.0036
ASP 1770.0086
SER 1780.0170
SER 1790.0125
LEU 1800.0093
SER 1810.0227
PRO 1820.0393
ASP 1830.0157
GLN 1840.0123
VAL 1850.0216
LYS 1860.0316
LYS 1870.0345
HIS 1890.0172
ASP 1900.0168
ARG 1910.0172
VAL 1920.0029
GLN 1930.0196
LYS 1940.0246
THR 1950.0121
LYS 1960.0125
ASP 1970.0223
GLN 1980.0098
VAL 1990.0058
GLN 2000.0046
LYS 2010.0094
CYS 2020.0084
ARG 2030.0084
GLU 2040.0133
LYS 2050.0125
TYR 2060.0074
GLU 2070.0053
GLN 2080.0077
ALA 2090.0079
ILE 2100.0056
ALA 2110.0092
GLU 2120.0097
ILE 2130.0071
THR 2140.0094
LYS 2150.0116
TYR 2160.0066
ASN 2170.0074
SER 2180.0089
VAL 2190.0087
TYR 2200.0092
ILE 2210.0121
GLU 2220.0153
ASP 2230.0123
THR 2250.0105
SER 2260.0123
VAL 2270.0097
PHE 2280.0081
GLU 2290.0086
LYS 2300.0109
CYS 2310.0079
GLN 2320.0068
THR 2330.0083
PHE 2340.0089
GLU 2350.0090
LYS 2360.0098
THR 2370.0087
ARG 2380.0077
LEU 2390.0086
GLN 2400.0089
PHE 2410.0070
PHE 2420.0077
LYS 2430.0083
GLU 2440.0088
ILE 2450.0076
LEU 2460.0061
PHE 2470.0078
ASN 2480.0084
VAL 2490.0057
HIS 2500.0051
SER 2510.0084
CYS 2520.0088
LEU 2530.0084
ASP 2540.0078
LEU 2550.0092
THR 2560.0040
LYS 2570.0128
VAL 2580.0287
GLN 2590.0506
SER 2600.0197
LEU 2610.0078
PRO 2620.0172
GLN 2630.0148
ILE 2640.0088
TYR 2650.0087
GLU 2660.0096
GLU 2670.0088
PHE 2680.0068
SER 2690.0035
HIS 2700.0091
THR 2710.0095
ILE 2720.0087
ASN 2730.0121
ASN 2740.0132
ALA 2750.0099
ASP 2760.0054
GLN 2770.0053
GLN 2780.0150
LYS 2790.0197
ASP 2800.0143
LEU 2810.0141
LYS 2820.0349
TRP 2830.0341
TRP 2840.0195
SER 2850.0215
ASN 2860.0345
ASN 2870.0325
HIS 2880.0137
GLY 2890.0096
ILE 2900.0162
ASN 2910.0291
ALA 2930.0370
ASN 2950.0233
TRP 2960.0079
PRO 2970.0163
SER 2980.0343

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.