CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  ENDOCYTOSIS 29-JUN-09 3I2W  ***

<R2> analysis for 2602230445411017275

---  normal mode 69  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0991
SER 140.0160
ASP 150.0123
SER 160.0090
PHE 170.0051
TRP 180.0053
GLU 190.0076
PRO 200.0058
GLY 210.0029
ASN 220.0036
TYR 230.0021
LYS 240.0035
ARG 250.0055
THR 260.0040
THR 270.0049
LYS 280.0063
ARG 290.0036
ILE 300.0034
GLU 310.0051
ASP 320.0050
GLY 330.0039
TYR 340.0036
LYS 350.0057
LEU 360.0065
CYS 370.0053
ASN 380.0051
ASP 390.0054
LEU 400.0053
GLN 410.0043
GLN 420.0041
LEU 430.0041
ILE 440.0026
GLN 450.0033
GLU 460.0031
ARG 470.0032
ALA 480.0039
ASP 490.0054
ILE 500.0027
GLU 510.0038
LYS 520.0058
GLY 530.0042
TYR 540.0057
ALA 550.0070
LYS 560.0071
SER 570.0073
LEU 580.0079
ARG 590.0068
THR 600.0084
TRP 610.0079
SER 620.0073
LYS 630.0102
LYS 640.0128
TRP 650.0087
GLY 660.0103
GLU 670.0143
LEU 680.0164
ILE 690.0110
GLU 700.0172
LYS 710.0367
GLY 720.0154
PRO 730.0072
GLU 740.0045
TYR 750.0062
GLY 760.0073
THR 770.0059
THR 780.0045
GLU 790.0049
ALA 800.0067
ALA 810.0056
TRP 820.0029
LYS 830.0020
GLY 840.0033
VAL 850.0047
LEU 860.0059
THR 870.0052
GLU 880.0065
SER 890.0092
GLU 900.0089
ARG 910.0096
ILE 920.0125
SER 930.0116
ASP 940.0125
VAL 950.0153
HIS 960.0115
LYS 980.0190
ILE 990.0127
LYS 1000.0105
ASP 1010.0162
ASN 1020.0116
LEU 1030.0053
CYS 1040.0094
ASN 1050.0134
ASP 1060.0071
VAL 1070.0021
ASN 1080.0031
SER 1090.0021
GLN 1100.0025
ILE 1110.0029
LYS 1120.0041
THR 1130.0055
TRP 1140.0053
GLN 1150.0040
LYS 1160.0124
GLU 1170.0142
ASN 1180.0093
TYR 1190.0070
HIS 1200.0089
HIS 1210.0088
THR 1220.0116
LEU 1230.0194
GLN 1250.0049
ILE 1260.0071
LYS 1270.0083
GLU 1280.0084
ARG 1290.0079
LYS 1300.0078
ASP 1310.0089
LEU 1320.0071
GLU 1330.0064
ASP 1340.0070
LEU 1350.0060
PHE 1360.0025
LYS 1370.0014
LYS 1380.0055
ALA 1390.0044
GLN 1400.0049
LYS 1410.0052
PRO 1420.0049
TRP 1430.0049
ALA 1440.0048
LYS 1450.0036
LEU 1460.0018
LEU 1470.0025
ALA 1480.0027
LYS 1490.0040
VAL 1500.0055
GLU 1510.0052
LYS 1520.0049
ALA 1530.0037
LYS 1540.0033
ALA 1550.0046
ASP 1560.0027
TYR 1570.0041
HIS 1580.0066
SER 1590.0064
ALA 1600.0062
CYS 1610.0056
LYS 1620.0075
THR 1630.0058
GLU 1640.0028
ARG 1650.0072
SER 1660.0110
ALA 1670.0060
THR 1680.0126
HIS 1890.0088
ASP 1900.0036
ARG 1910.0042
VAL 1920.0050
GLN 1930.0050
LYS 1940.0049
THR 1950.0041
LYS 1960.0043
ASP 1970.0049
GLN 1980.0041
VAL 1990.0062
GLN 2000.0069
LYS 2010.0048
CYS 2020.0022
ARG 2030.0046
GLU 2040.0039
LYS 2050.0041
TYR 2060.0024
GLU 2070.0043
GLN 2080.0060
ALA 2090.0076
ILE 2100.0096
ALA 2110.0114
GLU 2120.0089
ILE 2130.0046
THR 2140.0070
LYS 2150.0089
TYR 2160.0050
ASN 2170.0039
SER 2180.0070
VAL 2190.0075
TYR 2200.0065
ILE 2210.0075
GLU 2220.0085
ASP 2230.0049
THR 2250.0053
SER 2260.0041
VAL 2270.0049
PHE 2280.0060
GLU 2290.0062
LYS 2300.0061
CYS 2310.0038
GLN 2320.0032
THR 2330.0045
PHE 2340.0033
GLU 2350.0034
LYS 2360.0054
THR 2370.0071
ARG 2380.0066
LEU 2390.0082
GLN 2400.0086
PHE 2410.0078
PHE 2420.0083
LYS 2430.0064
GLU 2440.0063
ILE 2450.0061
LEU 2460.0033
PHE 2470.0026
ASN 2480.0025
VAL 2490.0020
HIS 2500.0025
SER 2510.0029
CYS 2520.0019
LEU 2530.0032
ASP 2540.0036
LEU 2550.0038
THR 2560.0047
LYS 2570.0051
VAL 2580.0051
GLN 2590.0079
SER 2600.0075
LEU 2610.0080
PRO 2620.0069
GLN 2630.0047
ILE 2640.0039
TYR 2650.0046
GLU 2660.0038
GLU 2670.0056
PHE 2680.0035
SER 2690.0087
HIS 2700.0186
THR 2710.0134
ILE 2720.0100
ASN 2730.0174
ASN 2740.0169
ALA 2750.0100
ASP 2760.0083
GLN 2770.0061
GLN 2780.0075
LYS 2790.0081
ASP 2800.0069
LEU 2810.0067
LYS 2820.0059
TRP 2830.0056
TRP 2840.0056
SER 2850.0060
ASN 2860.0062
ASN 2870.0042
HIS 2880.0032
GLY 2890.0050
ILE 2900.0073
ASN 2910.0137
ALA 2930.0578
ASN 2950.0061
TRP 2960.0142
PRO 2970.0237
SER 2980.0038
PHE 2990.0024
VAL 3000.0109
GLU 3010.0233
TYR 3020.0204
THR 3030.0340
SER 140.0436
ASP 150.0363
SER 160.0210
PHE 170.0029
TRP 180.0028
GLU 190.0054
PRO 200.0072
GLY 210.0132
ASN 220.0100
TYR 230.0058
LYS 240.0066
ARG 250.0067
THR 260.0050
THR 270.0035
LYS 280.0040
ARG 290.0054
ILE 300.0044
GLU 310.0060
ASP 320.0098
GLY 330.0081
TYR 340.0090
LYS 350.0097
LEU 360.0076
CYS 370.0071
ASN 380.0063
ASP 390.0043
LEU 400.0031
GLN 410.0047
GLN 420.0023
LEU 430.0034
ILE 440.0025
GLN 450.0034
GLU 460.0058
ARG 470.0053
ALA 480.0073
ASP 490.0066
ILE 500.0060
GLU 510.0074
LYS 520.0090
GLY 530.0076
TYR 540.0062
ALA 550.0072
LYS 560.0084
SER 570.0062
LEU 580.0047
ARG 590.0059
THR 600.0065
TRP 610.0056
SER 620.0045
LYS 630.0040
LYS 640.0045
TRP 650.0023
GLY 660.0052
GLU 670.0065
LEU 680.0092
ILE 690.0071
GLU 700.0130
LYS 710.0236
GLY 720.0156
PRO 730.0065
GLU 740.0064
TYR 750.0048
GLY 760.0037
THR 770.0047
THR 780.0051
GLU 790.0058
ALA 800.0038
ALA 810.0021
TRP 820.0022
LYS 830.0033
GLY 840.0046
VAL 850.0036
LEU 860.0040
THR 870.0044
GLU 880.0038
SER 890.0033
GLU 900.0041
ARG 910.0041
ILE 920.0027
SER 930.0055
ASP 940.0074
VAL 950.0053
HIS 960.0071
LYS 980.0103
ILE 990.0075
LYS 1000.0062
ASP 1010.0085
ASN 1020.0102
LEU 1030.0069
CYS 1040.0064
ASN 1050.0111
ASP 1060.0136
VAL 1070.0104
ASN 1080.0095
SER 1090.0135
GLN 1100.0128
ILE 1110.0106
LYS 1120.0151
THR 1130.0122
TRP 1140.0118
GLN 1150.0116
LYS 1160.0097
GLU 1170.0129
ASN 1180.0123
TYR 1190.0070
HIS 1200.0102
HIS 1210.0171
THR 1220.0294
LEU 1230.0367
GLN 1250.0156
ILE 1260.0082
LYS 1270.0094
GLU 1280.0075
ARG 1290.0074
LYS 1300.0113
ASP 1310.0089
LEU 1320.0082
GLU 1330.0069
ASP 1340.0050
LEU 1350.0069
PHE 1360.0056
LYS 1370.0007
LYS 1380.0040
ALA 1390.0029
GLN 1400.0059
LYS 1410.0085
PRO 1420.0080
TRP 1430.0094
ALA 1440.0193
LYS 1450.0207
LEU 1460.0139
LEU 1470.0211
ALA 1480.0270
LYS 1490.0146
VAL 1500.0099
GLU 1510.0154
LYS 1520.0052
ALA 1530.0032
LYS 1540.0047
ALA 1550.0112
ASP 1560.0102
TYR 1570.0071
HIS 1580.0118
SER 1590.0154
ALA 1600.0117
CYS 1610.0076
LYS 1620.0134
THR 1630.0195
GLU 1640.0174
ARG 1650.0296
SER 1660.0345
ALA 1670.0150
THR 1680.0137
ASN 1690.0175
GLN 1700.0233
GLU 1710.0215
ARG 1720.0194
ASN 1730.0203
ALA 1740.0258
ASN 1750.0182
ALA 1760.0475
ASP 1770.0520
SER 1780.0810
SER 1790.0134
LEU 1800.0285
SER 1810.0360
PRO 1820.0991
ASP 1830.0343
GLN 1840.0452
VAL 1850.0936
LYS 1860.0275
LYS 1870.0676
HIS 1890.0055
ASP 1900.0030
ARG 1910.0056
VAL 1920.0043
GLN 1930.0113
LYS 1940.0101
THR 1950.0036
LYS 1960.0115
ASP 1970.0105
GLN 1980.0059
VAL 1990.0064
GLN 2000.0052
LYS 2010.0049
CYS 2020.0047
ARG 2030.0027
GLU 2040.0011
LYS 2050.0017
TYR 2060.0018
GLU 2070.0019
GLN 2080.0019
ALA 2090.0004
ILE 2100.0056
ALA 2110.0097
GLU 2120.0067
ILE 2130.0050
THR 2140.0175
LYS 2150.0192
TYR 2160.0071
ASN 2170.0129
SER 2180.0148
VAL 2190.0067
TYR 2200.0073
ILE 2210.0102
GLU 2220.0081
ASP 2230.0023
THR 2250.0030
SER 2260.0034
VAL 2270.0036
PHE 2280.0054
GLU 2290.0067
LYS 2300.0062
CYS 2310.0069
GLN 2320.0075
THR 2330.0085
PHE 2340.0090
GLU 2350.0076
LYS 2360.0066
THR 2370.0076
ARG 2380.0074
LEU 2390.0053
GLN 2400.0054
PHE 2410.0065
PHE 2420.0051
LYS 2430.0074
GLU 2440.0093
ILE 2450.0074
LEU 2460.0049
PHE 2470.0083
ASN 2480.0086
VAL 2490.0030
HIS 2500.0030
SER 2510.0033
CYS 2520.0038
LEU 2530.0049
ASP 2540.0055
LEU 2550.0091
THR 2560.0088
LYS 2570.0090
VAL 2580.0087
GLN 2590.0069
SER 2600.0064
LEU 2610.0047
PRO 2620.0067
GLN 2630.0097
ILE 2640.0065
TYR 2650.0063
GLU 2660.0093
GLU 2670.0079
PHE 2680.0057
SER 2690.0058
HIS 2700.0067
THR 2710.0047
ILE 2720.0021
ASN 2730.0023
ASN 2740.0037
ALA 2750.0056
ASP 2760.0082
GLN 2770.0067
GLN 2780.0058
LYS 2790.0037
ASP 2800.0033
LEU 2810.0028
LYS 2820.0046
TRP 2830.0035
TRP 2840.0030
SER 2850.0070
ASN 2860.0087
ASN 2870.0069
HIS 2880.0044
GLY 2890.0054
ILE 2900.0068
ASN 2910.0129
ALA 2930.0025
ASN 2950.0108
TRP 2960.0039
PRO 2970.0088
SER 2980.0190

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.