CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  ENDOCYTOSIS 29-JUN-09 3I2W  ***

<R2> analysis for 2602230445411017275

---  normal mode 74  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0538
SER 140.0364
ASP 150.0203
SER 160.0137
PHE 170.0099
TRP 180.0152
GLU 190.0231
PRO 200.0219
GLY 210.0172
ASN 220.0108
TYR 230.0082
LYS 240.0101
ARG 250.0109
THR 260.0108
THR 270.0119
LYS 280.0155
ARG 290.0114
ILE 300.0079
GLU 310.0094
ASP 320.0105
GLY 330.0095
TYR 340.0092
LYS 350.0082
LEU 360.0083
CYS 370.0082
ASN 380.0062
ASP 390.0066
LEU 400.0063
GLN 410.0073
GLN 420.0092
LEU 430.0106
ILE 440.0077
GLN 450.0087
GLU 460.0095
ARG 470.0075
ALA 480.0095
ASP 490.0074
ILE 500.0093
GLU 510.0089
LYS 520.0102
GLY 530.0130
TYR 540.0116
ALA 550.0106
LYS 560.0111
SER 570.0115
LEU 580.0083
ARG 590.0083
THR 600.0071
TRP 610.0084
SER 620.0106
LYS 630.0121
LYS 640.0113
TRP 650.0074
GLY 660.0046
GLU 670.0027
LEU 680.0123
ILE 690.0068
GLU 700.0193
LYS 710.0433
GLY 720.0233
PRO 730.0027
GLU 740.0037
TYR 750.0049
GLY 760.0063
THR 770.0058
THR 780.0049
GLU 790.0040
ALA 800.0026
ALA 810.0031
TRP 820.0034
LYS 830.0036
GLY 840.0089
VAL 850.0092
LEU 860.0086
THR 870.0093
GLU 880.0077
SER 890.0081
GLU 900.0091
ARG 910.0098
ILE 920.0070
SER 930.0080
ASP 940.0103
VAL 950.0097
HIS 960.0089
LYS 980.0064
ILE 990.0058
LYS 1000.0070
ASP 1010.0076
ASN 1020.0082
LEU 1030.0061
CYS 1040.0042
ASN 1050.0050
ASP 1060.0052
VAL 1070.0048
ASN 1080.0034
SER 1090.0048
GLN 1100.0049
ILE 1110.0065
LYS 1120.0085
THR 1130.0113
TRP 1140.0120
GLN 1150.0100
LYS 1160.0082
GLU 1170.0110
ASN 1180.0124
TYR 1190.0118
HIS 1200.0152
HIS 1210.0146
THR 1220.0129
LEU 1230.0112
GLN 1250.0169
ILE 1260.0113
LYS 1270.0091
GLU 1280.0096
ARG 1290.0133
LYS 1300.0191
ASP 1310.0189
LEU 1320.0171
GLU 1330.0212
ASP 1340.0280
LEU 1350.0192
PHE 1360.0111
LYS 1370.0162
LYS 1380.0151
ALA 1390.0176
GLN 1400.0197
LYS 1410.0206
PRO 1420.0203
TRP 1430.0225
ALA 1440.0259
LYS 1450.0267
LEU 1460.0153
LEU 1470.0124
ALA 1480.0139
LYS 1490.0158
VAL 1500.0112
GLU 1510.0107
LYS 1520.0229
ALA 1530.0159
LYS 1540.0143
ALA 1550.0205
ASP 1560.0147
TYR 1570.0128
HIS 1580.0158
SER 1590.0130
ALA 1600.0136
CYS 1610.0057
LYS 1620.0249
THR 1630.0262
GLU 1640.0109
ARG 1650.0231
SER 1660.0297
ALA 1670.0131
THR 1680.0165
HIS 1890.0116
ASP 1900.0209
ARG 1910.0152
VAL 1920.0124
GLN 1930.0084
LYS 1940.0067
THR 1950.0159
LYS 1960.0175
ASP 1970.0138
GLN 1980.0122
VAL 1990.0156
GLN 2000.0139
LYS 2010.0028
CYS 2020.0056
ARG 2030.0083
GLU 2040.0095
LYS 2050.0139
TYR 2060.0092
GLU 2070.0054
GLN 2080.0144
ALA 2090.0154
ILE 2100.0129
ALA 2110.0181
GLU 2120.0150
ILE 2130.0108
THR 2140.0139
LYS 2150.0238
TYR 2160.0173
ASN 2170.0128
SER 2180.0160
VAL 2190.0181
TYR 2200.0169
ILE 2210.0160
GLU 2220.0145
ASP 2230.0105
THR 2250.0041
SER 2260.0048
VAL 2270.0080
PHE 2280.0097
GLU 2290.0029
LYS 2300.0066
CYS 2310.0065
GLN 2320.0069
THR 2330.0038
PHE 2340.0072
GLU 2350.0092
LYS 2360.0107
THR 2370.0107
ARG 2380.0111
LEU 2390.0115
GLN 2400.0104
PHE 2410.0102
PHE 2420.0077
LYS 2430.0041
GLU 2440.0063
ILE 2450.0047
LEU 2460.0049
PHE 2470.0077
ASN 2480.0068
VAL 2490.0059
HIS 2500.0076
SER 2510.0101
CYS 2520.0070
LEU 2530.0080
ASP 2540.0098
LEU 2550.0090
THR 2560.0117
LYS 2570.0091
VAL 2580.0067
GLN 2590.0146
SER 2600.0143
LEU 2610.0062
PRO 2620.0064
GLN 2630.0107
ILE 2640.0101
TYR 2650.0097
GLU 2660.0123
GLU 2670.0116
PHE 2680.0108
SER 2690.0119
HIS 2700.0122
THR 2710.0077
ILE 2720.0078
ASN 2730.0072
ASN 2740.0007
ALA 2750.0053
ASP 2760.0149
GLN 2770.0135
GLN 2780.0181
LYS 2790.0166
ASP 2800.0105
LEU 2810.0090
LYS 2820.0116
TRP 2830.0085
TRP 2840.0019
SER 2850.0068
ASN 2860.0040
ASN 2870.0062
HIS 2880.0118
GLY 2890.0117
ILE 2900.0112
ASN 2910.0135
ALA 2930.0488
ASN 2950.0290
TRP 2960.0194
PRO 2970.0167
SER 2980.0297
PHE 2990.0199
VAL 3000.0136
GLU 3010.0050
TYR 3020.0101
THR 3030.0169
SER 140.0538
ASP 150.0512
SER 160.0284
PHE 170.0136
TRP 180.0097
GLU 190.0165
PRO 200.0130
GLY 210.0127
ASN 220.0128
TYR 230.0090
LYS 240.0088
ARG 250.0115
THR 260.0094
THR 270.0082
LYS 280.0062
ARG 290.0037
ILE 300.0041
GLU 310.0038
ASP 320.0036
GLY 330.0039
TYR 340.0027
LYS 350.0025
LEU 360.0027
CYS 370.0036
ASN 380.0035
ASP 390.0033
LEU 400.0029
GLN 410.0043
GLN 420.0069
LEU 430.0061
ILE 440.0023
GLN 450.0035
GLU 460.0029
ARG 470.0037
ALA 480.0055
ASP 490.0063
ILE 500.0079
GLU 510.0118
LYS 520.0137
GLY 530.0139
TYR 540.0137
ALA 550.0135
LYS 560.0122
SER 570.0132
LEU 580.0122
ARG 590.0077
THR 600.0103
TRP 610.0118
SER 620.0109
LYS 630.0132
LYS 640.0172
TRP 650.0153
GLY 660.0132
GLU 670.0161
LEU 680.0210
ILE 690.0142
GLU 700.0145
LYS 710.0297
GLY 720.0143
PRO 730.0084
GLU 740.0113
TYR 750.0113
GLY 760.0124
THR 770.0097
THR 780.0109
GLU 790.0092
ALA 800.0101
ALA 810.0096
TRP 820.0094
LYS 830.0078
GLY 840.0078
VAL 850.0072
LEU 860.0064
THR 870.0051
GLU 880.0079
SER 890.0101
GLU 900.0061
ARG 910.0086
ILE 920.0154
SER 930.0154
ASP 940.0166
VAL 950.0197
HIS 960.0182
LYS 980.0194
ILE 990.0155
LYS 1000.0126
ASP 1010.0145
ASN 1020.0114
LEU 1030.0053
CYS 1040.0088
ASN 1050.0118
ASP 1060.0092
VAL 1070.0039
ASN 1080.0054
SER 1090.0085
GLN 1100.0103
ILE 1110.0084
LYS 1120.0130
THR 1130.0155
TRP 1140.0127
GLN 1150.0074
LYS 1160.0127
GLU 1170.0154
ASN 1180.0137
TYR 1190.0128
HIS 1200.0178
HIS 1210.0190
THR 1220.0194
LEU 1230.0292
GLN 1250.0146
ILE 1260.0142
LYS 1270.0132
GLU 1280.0106
ARG 1290.0074
LYS 1300.0056
ASP 1310.0085
LEU 1320.0101
GLU 1330.0084
ASP 1340.0086
LEU 1350.0081
PHE 1360.0086
LYS 1370.0080
LYS 1380.0039
ALA 1390.0038
GLN 1400.0078
LYS 1410.0068
PRO 1420.0066
TRP 1430.0050
ALA 1440.0077
LYS 1450.0073
LEU 1460.0081
LEU 1470.0097
ALA 1480.0164
LYS 1490.0166
VAL 1500.0152
GLU 1510.0156
LYS 1520.0097
ALA 1530.0093
LYS 1540.0085
ALA 1550.0089
ASP 1560.0095
TYR 1570.0093
HIS 1580.0101
SER 1590.0159
ALA 1600.0156
CYS 1610.0126
LYS 1620.0116
THR 1630.0074
GLU 1640.0033
ARG 1650.0050
SER 1660.0112
ALA 1670.0147
THR 1680.0159
ASN 1690.0203
GLN 1700.0237
GLU 1710.0219
ARG 1720.0190
ASN 1730.0084
ALA 1740.0134
ASN 1750.0213
ALA 1760.0332
ASP 1770.0257
SER 1780.0363
SER 1790.0303
LEU 1800.0183
SER 1810.0239
PRO 1820.0316
ASP 1830.0202
GLN 1840.0193
VAL 1850.0294
LYS 1860.0136
LYS 1870.0213
HIS 1890.0150
ASP 1900.0181
ARG 1910.0199
VAL 1920.0125
GLN 1930.0150
LYS 1940.0122
THR 1950.0051
LYS 1960.0071
ASP 1970.0117
GLN 1980.0158
VAL 1990.0121
GLN 2000.0110
LYS 2010.0140
CYS 2020.0087
ARG 2030.0056
GLU 2040.0126
LYS 2050.0089
TYR 2060.0086
GLU 2070.0133
GLN 2080.0153
ALA 2090.0148
ILE 2100.0143
ALA 2110.0119
GLU 2120.0111
ILE 2130.0034
THR 2140.0062
LYS 2150.0139
TYR 2160.0090
ASN 2170.0131
SER 2180.0174
VAL 2190.0104
TYR 2200.0101
ILE 2210.0115
GLU 2220.0082
ASP 2230.0056
THR 2250.0085
SER 2260.0081
VAL 2270.0106
PHE 2280.0098
GLU 2290.0091
LYS 2300.0103
CYS 2310.0078
GLN 2320.0057
THR 2330.0085
PHE 2340.0074
GLU 2350.0057
LYS 2360.0086
THR 2370.0100
ARG 2380.0075
LEU 2390.0082
GLN 2400.0100
PHE 2410.0091
PHE 2420.0052
LYS 2430.0056
GLU 2440.0083
ILE 2450.0073
LEU 2460.0063
PHE 2470.0081
ASN 2480.0078
VAL 2490.0065
HIS 2500.0070
SER 2510.0069
CYS 2520.0035
LEU 2530.0027
ASP 2540.0026
LEU 2550.0030
THR 2560.0049
LYS 2570.0115
VAL 2580.0139
GLN 2590.0143
SER 2600.0130
LEU 2610.0155
PRO 2620.0164
GLN 2630.0126
ILE 2640.0097
TYR 2650.0136
GLU 2660.0167
GLU 2670.0140
PHE 2680.0111
SER 2690.0163
HIS 2700.0279
THR 2710.0203
ILE 2720.0115
ASN 2730.0159
ASN 2740.0152
ALA 2750.0100
ASP 2760.0169
GLN 2770.0138
GLN 2780.0152
LYS 2790.0207
ASP 2800.0158
LEU 2810.0123
LYS 2820.0243
TRP 2830.0250
TRP 2840.0171
SER 2850.0187
ASN 2860.0282
ASN 2870.0226
HIS 2880.0106
GLY 2890.0132
ILE 2900.0180
ASN 2910.0313
ALA 2930.0141
ASN 2950.0154
TRP 2960.0130
PRO 2970.0187
SER 2980.0283

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.