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***  ENDOCYTOSIS 29-JUN-09 3I2W  ***

<R2> analysis for 2602230445411017275

---  normal mode 80  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0636
SER 140.0419
ASP 150.0361
SER 160.0183
PHE 170.0084
TRP 180.0083
GLU 190.0091
PRO 200.0094
GLY 210.0144
ASN 220.0083
TYR 230.0073
LYS 240.0051
ARG 250.0024
THR 260.0047
THR 270.0024
LYS 280.0022
ARG 290.0080
ILE 300.0075
GLU 310.0074
ASP 320.0112
GLY 330.0095
TYR 340.0094
LYS 350.0089
LEU 360.0072
CYS 370.0056
ASN 380.0075
ASP 390.0063
LEU 400.0028
GLN 410.0051
GLN 420.0087
LEU 430.0090
ILE 440.0081
GLN 450.0068
GLU 460.0115
ARG 470.0086
ALA 480.0127
ASP 490.0152
ILE 500.0158
GLU 510.0157
LYS 520.0150
GLY 530.0161
TYR 540.0160
ALA 550.0157
LYS 560.0166
SER 570.0148
LEU 580.0147
ARG 590.0118
THR 600.0117
TRP 610.0122
SER 620.0108
LYS 630.0115
LYS 640.0137
TRP 650.0127
GLY 660.0146
GLU 670.0135
LEU 680.0119
ILE 690.0115
GLU 700.0157
LYS 710.0331
GLY 720.0145
PRO 730.0032
GLU 740.0082
TYR 750.0099
GLY 760.0114
THR 770.0093
THR 780.0092
GLU 790.0105
ALA 800.0099
ALA 810.0094
TRP 820.0067
LYS 830.0083
GLY 840.0059
VAL 850.0073
LEU 860.0080
THR 870.0077
GLU 880.0076
SER 890.0106
GLU 900.0117
ARG 910.0119
ILE 920.0150
SER 930.0163
ASP 940.0182
VAL 950.0218
HIS 960.0177
LYS 980.0231
ILE 990.0212
LYS 1000.0166
ASP 1010.0205
ASN 1020.0179
LEU 1030.0148
CYS 1040.0143
ASN 1050.0174
ASP 1060.0148
VAL 1070.0085
ASN 1080.0106
SER 1090.0105
GLN 1100.0062
ILE 1110.0060
LYS 1120.0152
THR 1130.0178
TRP 1140.0088
GLN 1150.0068
LYS 1160.0352
GLU 1170.0293
ASN 1180.0096
TYR 1190.0145
HIS 1200.0159
HIS 1210.0162
THR 1220.0076
LEU 1230.0127
GLN 1250.0101
ILE 1260.0119
LYS 1270.0108
GLU 1280.0120
ARG 1290.0077
LYS 1300.0039
ASP 1310.0134
LEU 1320.0111
GLU 1330.0097
ASP 1340.0168
LEU 1350.0150
PHE 1360.0095
LYS 1370.0080
LYS 1380.0048
ALA 1390.0056
GLN 1400.0035
LYS 1410.0141
PRO 1420.0172
TRP 1430.0062
ALA 1440.0164
LYS 1450.0199
LEU 1460.0094
LEU 1470.0145
ALA 1480.0153
LYS 1490.0091
VAL 1500.0092
GLU 1510.0145
LYS 1520.0186
ALA 1530.0155
LYS 1540.0200
ALA 1550.0228
ASP 1560.0207
TYR 1570.0173
HIS 1580.0159
SER 1590.0177
ALA 1600.0150
CYS 1610.0111
LYS 1620.0141
THR 1630.0144
GLU 1640.0136
ARG 1650.0310
SER 1660.0375
ALA 1670.0171
THR 1680.0290
HIS 1890.0272
ASP 1900.0315
ARG 1910.0309
VAL 1920.0230
GLN 1930.0186
LYS 1940.0238
THR 1950.0197
LYS 1960.0192
ASP 1970.0105
GLN 1980.0045
VAL 1990.0124
GLN 2000.0186
LYS 2010.0219
CYS 2020.0152
ARG 2030.0163
GLU 2040.0160
LYS 2050.0147
TYR 2060.0078
GLU 2070.0063
GLN 2080.0126
ALA 2090.0107
ILE 2100.0115
ALA 2110.0146
GLU 2120.0127
ILE 2130.0073
THR 2140.0092
LYS 2150.0072
TYR 2160.0122
ASN 2170.0171
SER 2180.0286
VAL 2190.0194
TYR 2200.0094
ILE 2210.0172
GLU 2220.0221
ASP 2230.0045
THR 2250.0117
SER 2260.0134
VAL 2270.0131
PHE 2280.0122
GLU 2290.0140
LYS 2300.0130
CYS 2310.0080
GLN 2320.0063
THR 2330.0085
PHE 2340.0135
GLU 2350.0096
LYS 2360.0106
THR 2370.0100
ARG 2380.0091
LEU 2390.0076
GLN 2400.0073
PHE 2410.0086
PHE 2420.0085
LYS 2430.0106
GLU 2440.0130
ILE 2450.0147
LEU 2460.0165
PHE 2470.0172
ASN 2480.0207
VAL 2490.0206
HIS 2500.0195
SER 2510.0200
CYS 2520.0159
LEU 2530.0158
ASP 2540.0157
LEU 2550.0166
THR 2560.0180
LYS 2570.0241
VAL 2580.0113
GLN 2590.0125
SER 2600.0126
LEU 2610.0102
PRO 2620.0124
GLN 2630.0082
ILE 2640.0073
TYR 2650.0092
GLU 2660.0079
GLU 2670.0062
PHE 2680.0066
SER 2690.0069
HIS 2700.0084
THR 2710.0089
ILE 2720.0107
ASN 2730.0117
ASN 2740.0108
ALA 2750.0106
ASP 2760.0124
GLN 2770.0090
GLN 2780.0065
LYS 2790.0108
ASP 2800.0104
LEU 2810.0058
LYS 2820.0117
TRP 2830.0139
TRP 2840.0100
SER 2850.0102
ASN 2860.0141
ASN 2870.0142
HIS 2880.0074
GLY 2890.0069
ILE 2900.0073
ASN 2910.0130
ALA 2930.0476
ASN 2950.0070
TRP 2960.0154
PRO 2970.0190
SER 2980.0192
PHE 2990.0176
VAL 3000.0218
GLU 3010.0144
TYR 3020.0024
THR 3030.0152
SER 140.0287
ASP 150.0282
SER 160.0193
PHE 170.0043
TRP 180.0076
GLU 190.0070
PRO 200.0075
GLY 210.0058
ASN 220.0006
TYR 230.0020
LYS 240.0029
ARG 250.0024
THR 260.0028
THR 270.0052
LYS 280.0056
ARG 290.0038
ILE 300.0039
GLU 310.0043
ASP 320.0049
GLY 330.0053
TYR 340.0052
LYS 350.0049
LEU 360.0044
CYS 370.0040
ASN 380.0063
ASP 390.0064
LEU 400.0064
GLN 410.0099
GLN 420.0101
LEU 430.0110
ILE 440.0140
GLN 450.0111
GLU 460.0110
ARG 470.0098
ALA 480.0118
ASP 490.0126
ILE 500.0112
GLU 510.0109
LYS 520.0094
GLY 530.0119
TYR 540.0132
ALA 550.0103
LYS 560.0082
SER 570.0132
LEU 580.0115
ARG 590.0048
THR 600.0069
TRP 610.0096
SER 620.0085
LYS 630.0044
LYS 640.0071
TRP 650.0094
GLY 660.0075
GLU 670.0043
LEU 680.0061
ILE 690.0062
GLU 700.0040
LYS 710.0033
GLY 720.0034
PRO 730.0014
GLU 740.0062
TYR 750.0069
GLY 760.0089
THR 770.0095
THR 780.0052
GLU 790.0097
ALA 800.0111
ALA 810.0099
TRP 820.0105
LYS 830.0161
GLY 840.0174
VAL 850.0181
LEU 860.0162
THR 870.0154
GLU 880.0151
SER 890.0156
GLU 900.0153
ARG 910.0163
ILE 920.0158
SER 930.0153
ASP 940.0170
VAL 950.0183
HIS 960.0143
LYS 980.0217
ILE 990.0218
LYS 1000.0199
ASP 1010.0226
ASN 1020.0210
LEU 1030.0210
CYS 1040.0220
ASN 1050.0194
ASP 1060.0161
VAL 1070.0139
ASN 1080.0155
SER 1090.0143
GLN 1100.0074
ILE 1110.0089
LYS 1120.0126
THR 1130.0076
TRP 1140.0040
GLN 1150.0059
LYS 1160.0088
GLU 1170.0053
ASN 1180.0075
TYR 1190.0121
HIS 1200.0158
HIS 1210.0149
THR 1220.0138
LEU 1230.0093
GLN 1250.0049
ILE 1260.0053
LYS 1270.0088
GLU 1280.0098
ARG 1290.0082
LYS 1300.0082
ASP 1310.0070
LEU 1320.0073
GLU 1330.0073
ASP 1340.0031
LEU 1350.0046
PHE 1360.0033
LYS 1370.0125
LYS 1380.0163
ALA 1390.0118
GLN 1400.0131
LYS 1410.0223
PRO 1420.0167
TRP 1430.0137
ALA 1440.0223
LYS 1450.0196
LEU 1460.0101
LEU 1470.0154
ALA 1480.0131
LYS 1490.0057
VAL 1500.0055
GLU 1510.0094
LYS 1520.0179
ALA 1530.0105
LYS 1540.0148
ALA 1550.0150
ASP 1560.0131
TYR 1570.0083
HIS 1580.0072
SER 1590.0107
ALA 1600.0079
CYS 1610.0047
LYS 1620.0141
THR 1630.0110
GLU 1640.0045
ARG 1650.0082
SER 1660.0052
ALA 1670.0059
THR 1680.0079
ASN 1690.0160
GLN 1700.0174
GLU 1710.0086
ARG 1720.0160
ASN 1730.0175
ALA 1740.0178
ASN 1750.0111
ALA 1760.0106
ASP 1770.0054
SER 1780.0136
SER 1790.0201
LEU 1800.0107
SER 1810.0076
PRO 1820.0053
ASP 1830.0068
GLN 1840.0180
VAL 1850.0228
LYS 1860.0068
LYS 1870.0163
HIS 1890.0094
ASP 1900.0082
ARG 1910.0099
VAL 1920.0047
GLN 1930.0061
LYS 1940.0073
THR 1950.0046
LYS 1960.0034
ASP 1970.0054
GLN 1980.0047
VAL 1990.0045
GLN 2000.0045
LYS 2010.0019
CYS 2020.0033
ARG 2030.0048
GLU 2040.0030
LYS 2050.0059
TYR 2060.0078
GLU 2070.0046
GLN 2080.0050
ALA 2090.0081
ILE 2100.0076
ALA 2110.0084
GLU 2120.0079
ILE 2130.0098
THR 2140.0158
LYS 2150.0128
TYR 2160.0071
ASN 2170.0137
SER 2180.0127
VAL 2190.0041
TYR 2200.0056
ILE 2210.0070
GLU 2220.0065
ASP 2230.0061
THR 2250.0021
SER 2260.0020
VAL 2270.0024
PHE 2280.0035
GLU 2290.0030
LYS 2300.0041
CYS 2310.0040
GLN 2320.0022
THR 2330.0051
PHE 2340.0049
GLU 2350.0020
LYS 2360.0052
THR 2370.0060
ARG 2380.0044
LEU 2390.0058
GLN 2400.0091
PHE 2410.0068
PHE 2420.0078
LYS 2430.0135
GLU 2440.0126
ILE 2450.0106
LEU 2460.0140
PHE 2470.0162
ASN 2480.0165
VAL 2490.0166
HIS 2500.0178
SER 2510.0179
CYS 2520.0144
LEU 2530.0165
ASP 2540.0180
LEU 2550.0194
THR 2560.0184
LYS 2570.0224
VAL 2580.0168
GLN 2590.0199
SER 2600.0118
LEU 2610.0128
PRO 2620.0164
GLN 2630.0144
ILE 2640.0092
TYR 2650.0094
GLU 2660.0096
GLU 2670.0098
PHE 2680.0104
SER 2690.0088
HIS 2700.0066
THR 2710.0088
ILE 2720.0100
ASN 2730.0062
ASN 2740.0036
ALA 2750.0037
ASP 2760.0176
GLN 2770.0123
GLN 2780.0232
LYS 2790.0268
ASP 2800.0135
LEU 2810.0087
LYS 2820.0146
TRP 2830.0137
TRP 2840.0045
SER 2850.0077
ASN 2860.0109
ASN 2870.0115
HIS 2880.0092
GLY 2890.0125
ILE 2900.0159
ASN 2910.0307
ALA 2930.0636
ASN 2950.0251
TRP 2960.0187
PRO 2970.0169
SER 2980.0325

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.