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***  ENDOCYTOSIS 29-JUN-09 3I2W  ***

<R2> analysis for 2602230445411017275

---  normal mode 88  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0450
SER 140.0336
ASP 150.0325
SER 160.0149
PHE 170.0112
TRP 180.0096
GLU 190.0113
PRO 200.0100
GLY 210.0096
ASN 220.0111
TYR 230.0131
LYS 240.0132
ARG 250.0125
THR 260.0095
THR 270.0128
LYS 280.0146
ARG 290.0072
ILE 300.0078
GLU 310.0111
ASP 320.0107
GLY 330.0092
TYR 340.0077
LYS 350.0066
LEU 360.0068
CYS 370.0046
ASN 380.0116
ASP 390.0109
LEU 400.0097
GLN 410.0186
GLN 420.0206
LEU 430.0208
ILE 440.0207
GLN 450.0158
GLU 460.0190
ARG 470.0148
ALA 480.0125
ASP 490.0088
ILE 500.0090
GLU 510.0061
LYS 520.0047
GLY 530.0043
TYR 540.0040
ALA 550.0043
LYS 560.0055
SER 570.0061
LEU 580.0053
ARG 590.0048
THR 600.0097
TRP 610.0092
SER 620.0113
LYS 630.0198
LYS 640.0182
TRP 650.0174
GLY 660.0256
GLU 670.0306
LEU 680.0251
ILE 690.0172
GLU 700.0246
LYS 710.0317
GLY 720.0239
PRO 730.0229
GLU 740.0091
TYR 750.0113
GLY 760.0125
THR 770.0085
THR 780.0076
GLU 790.0073
ALA 800.0053
ALA 810.0073
TRP 820.0079
LYS 830.0098
GLY 840.0121
VAL 850.0102
LEU 860.0058
THR 870.0076
GLU 880.0049
SER 890.0023
GLU 900.0070
ARG 910.0082
ILE 920.0113
SER 930.0137
ASP 940.0208
VAL 950.0188
HIS 960.0182
LYS 980.0386
ILE 990.0309
LYS 1000.0197
ASP 1010.0291
ASN 1020.0365
LEU 1030.0307
CYS 1040.0237
ASN 1050.0258
ASP 1060.0307
VAL 1070.0284
ASN 1080.0233
SER 1090.0213
GLN 1100.0188
ILE 1110.0186
LYS 1120.0188
THR 1130.0150
TRP 1140.0115
GLN 1150.0084
LYS 1160.0165
GLU 1170.0213
ASN 1180.0173
TYR 1190.0127
HIS 1200.0135
HIS 1210.0155
THR 1220.0140
LEU 1230.0202
GLN 1250.0237
ILE 1260.0178
LYS 1270.0105
GLU 1280.0092
ARG 1290.0140
LYS 1300.0158
ASP 1310.0156
LEU 1320.0155
GLU 1330.0174
ASP 1340.0172
LEU 1350.0197
PHE 1360.0151
LYS 1370.0127
LYS 1380.0243
ALA 1390.0198
GLN 1400.0127
LYS 1410.0152
PRO 1420.0120
TRP 1430.0072
ALA 1440.0141
LYS 1450.0158
LEU 1460.0099
LEU 1470.0122
ALA 1480.0151
LYS 1490.0077
VAL 1500.0045
GLU 1510.0087
LYS 1520.0082
ALA 1530.0104
LYS 1540.0142
ALA 1550.0156
ASP 1560.0147
TYR 1570.0131
HIS 1580.0104
SER 1590.0102
ALA 1600.0092
CYS 1610.0047
LYS 1620.0104
THR 1630.0108
GLU 1640.0086
ARG 1650.0122
SER 1660.0090
ALA 1670.0021
THR 1680.0164
HIS 1890.0234
ASP 1900.0217
ARG 1910.0204
VAL 1920.0173
GLN 1930.0169
LYS 1940.0162
THR 1950.0102
LYS 1960.0109
ASP 1970.0054
GLN 1980.0039
VAL 1990.0052
GLN 2000.0072
LYS 2010.0105
CYS 2020.0102
ARG 2030.0108
GLU 2040.0098
LYS 2050.0098
TYR 2060.0101
GLU 2070.0116
GLN 2080.0096
ALA 2090.0101
ILE 2100.0123
ALA 2110.0108
GLU 2120.0128
ILE 2130.0096
THR 2140.0095
LYS 2150.0155
TYR 2160.0065
ASN 2170.0099
SER 2180.0126
VAL 2190.0100
TYR 2200.0081
ILE 2210.0076
GLU 2220.0070
ASP 2230.0064
THR 2250.0048
SER 2260.0050
VAL 2270.0057
PHE 2280.0086
GLU 2290.0051
LYS 2300.0034
CYS 2310.0048
GLN 2320.0008
THR 2330.0052
PHE 2340.0068
GLU 2350.0070
LYS 2360.0085
THR 2370.0106
ARG 2380.0109
LEU 2390.0124
GLN 2400.0121
PHE 2410.0121
PHE 2420.0120
LYS 2430.0130
GLU 2440.0102
ILE 2450.0114
LEU 2460.0107
PHE 2470.0088
ASN 2480.0094
VAL 2490.0126
HIS 2500.0076
SER 2510.0064
CYS 2520.0175
LEU 2530.0102
ASP 2540.0042
LEU 2550.0057
THR 2560.0047
LYS 2570.0046
VAL 2580.0130
GLN 2590.0123
SER 2600.0141
LEU 2610.0165
PRO 2620.0149
GLN 2630.0060
ILE 2640.0033
TYR 2650.0071
GLU 2660.0108
GLU 2670.0082
PHE 2680.0088
SER 2690.0098
HIS 2700.0075
THR 2710.0071
ILE 2720.0072
ASN 2730.0099
ASN 2740.0089
ALA 2750.0070
ASP 2760.0149
GLN 2770.0131
GLN 2780.0156
LYS 2790.0148
ASP 2800.0130
LEU 2810.0097
LYS 2820.0093
TRP 2830.0120
TRP 2840.0104
SER 2850.0138
ASN 2860.0219
ASN 2870.0257
HIS 2880.0178
GLY 2890.0144
ILE 2900.0128
ASN 2910.0221
ALA 2930.0167
ASN 2950.0308
TRP 2960.0157
PRO 2970.0155
SER 2980.0043
PHE 2990.0053
VAL 3000.0061
GLU 3010.0072
TYR 3020.0067
THR 3030.0121
SER 140.0186
ASP 150.0083
SER 160.0029
PHE 170.0067
TRP 180.0029
GLU 190.0081
PRO 200.0128
GLY 210.0152
ASN 220.0121
TYR 230.0129
LYS 240.0163
ARG 250.0165
THR 260.0082
THR 270.0082
LYS 280.0093
ARG 290.0062
ILE 300.0063
GLU 310.0110
ASP 320.0090
GLY 330.0101
TYR 340.0117
LYS 350.0086
LEU 360.0067
CYS 370.0056
ASN 380.0014
ASP 390.0014
LEU 400.0038
GLN 410.0037
GLN 420.0040
LEU 430.0030
ILE 440.0061
GLN 450.0067
GLU 460.0032
ARG 470.0053
ALA 480.0082
ASP 490.0103
ILE 500.0106
GLU 510.0110
LYS 520.0131
GLY 530.0123
TYR 540.0066
ALA 550.0053
LYS 560.0094
SER 570.0124
LEU 580.0086
ARG 590.0098
THR 600.0179
TRP 610.0188
SER 620.0202
LYS 630.0230
LYS 640.0240
TRP 650.0221
GLY 660.0224
GLU 670.0168
LEU 680.0130
ILE 690.0144
GLU 700.0133
LYS 710.0181
GLY 720.0130
PRO 730.0132
GLU 740.0112
TYR 750.0105
GLY 760.0100
THR 770.0099
THR 780.0110
GLU 790.0129
ALA 800.0117
ALA 810.0110
TRP 820.0080
LYS 830.0106
GLY 840.0104
VAL 850.0106
LEU 860.0126
THR 870.0110
GLU 880.0077
SER 890.0098
GLU 900.0083
ARG 910.0097
ILE 920.0065
SER 930.0062
ASP 940.0089
VAL 950.0145
HIS 960.0132
LYS 980.0210
ILE 990.0145
LYS 1000.0182
ASP 1010.0228
ASN 1020.0114
LEU 1030.0147
CYS 1040.0199
ASN 1050.0204
ASP 1060.0174
VAL 1070.0174
ASN 1080.0165
SER 1090.0158
GLN 1100.0092
ILE 1110.0074
LYS 1120.0067
THR 1130.0119
TRP 1140.0131
GLN 1150.0098
LYS 1160.0296
GLU 1170.0369
ASN 1180.0252
TYR 1190.0203
HIS 1200.0234
HIS 1210.0277
THR 1220.0257
LEU 1230.0299
GLN 1250.0190
ILE 1260.0188
LYS 1270.0163
GLU 1280.0116
ARG 1290.0091
LYS 1300.0055
ASP 1310.0034
LEU 1320.0041
GLU 1330.0120
ASP 1340.0154
LEU 1350.0117
PHE 1360.0109
LYS 1370.0178
LYS 1380.0165
ALA 1390.0098
GLN 1400.0091
LYS 1410.0105
PRO 1420.0110
TRP 1430.0076
ALA 1440.0089
LYS 1450.0114
LEU 1460.0080
LEU 1470.0097
ALA 1480.0091
LYS 1490.0060
VAL 1500.0061
GLU 1510.0089
LYS 1520.0100
ALA 1530.0069
LYS 1540.0069
ALA 1550.0086
ASP 1560.0087
TYR 1570.0051
HIS 1580.0016
SER 1590.0023
ALA 1600.0045
CYS 1610.0031
LYS 1620.0043
THR 1630.0054
GLU 1640.0046
ARG 1650.0058
SER 1660.0039
ALA 1670.0018
THR 1680.0027
ASN 1690.0061
GLN 1700.0072
GLU 1710.0072
ARG 1720.0081
ASN 1730.0048
ALA 1740.0057
ASN 1750.0062
ALA 1760.0102
ASP 1770.0098
SER 1780.0196
SER 1790.0076
LEU 1800.0071
SER 1810.0091
PRO 1820.0057
ASP 1830.0076
GLN 1840.0083
VAL 1850.0060
LYS 1860.0057
LYS 1870.0088
HIS 1890.0079
ASP 1900.0071
ARG 1910.0031
VAL 1920.0019
GLN 1930.0065
LYS 1940.0093
THR 1950.0058
LYS 1960.0041
ASP 1970.0055
GLN 1980.0042
VAL 1990.0040
GLN 2000.0017
LYS 2010.0035
CYS 2020.0034
ARG 2030.0043
GLU 2040.0054
LYS 2050.0050
TYR 2060.0048
GLU 2070.0055
GLN 2080.0066
ALA 2090.0043
ILE 2100.0039
ALA 2110.0039
GLU 2120.0046
ILE 2130.0050
THR 2140.0030
LYS 2150.0047
TYR 2160.0033
ASN 2170.0038
SER 2180.0055
VAL 2190.0050
TYR 2200.0042
ILE 2210.0070
GLU 2220.0071
ASP 2230.0038
THR 2250.0066
SER 2260.0043
VAL 2270.0046
PHE 2280.0073
GLU 2290.0059
LYS 2300.0055
CYS 2310.0058
GLN 2320.0047
THR 2330.0058
PHE 2340.0063
GLU 2350.0084
LYS 2360.0101
THR 2370.0102
ARG 2380.0084
LEU 2390.0098
GLN 2400.0132
PHE 2410.0132
PHE 2420.0101
LYS 2430.0116
GLU 2440.0167
ILE 2450.0158
LEU 2460.0130
PHE 2470.0147
ASN 2480.0174
VAL 2490.0140
HIS 2500.0102
SER 2510.0102
CYS 2520.0044
LEU 2530.0064
ASP 2540.0176
LEU 2550.0331
THR 2560.0450
LYS 2570.0409
VAL 2580.0269
GLN 2590.0276
SER 2600.0205
LEU 2610.0217
PRO 2620.0201
GLN 2630.0182
ILE 2640.0140
TYR 2650.0116
GLU 2660.0160
GLU 2670.0143
PHE 2680.0091
SER 2690.0111
HIS 2700.0159
THR 2710.0135
ILE 2720.0099
ASN 2730.0113
ASN 2740.0133
ALA 2750.0132
ASP 2760.0102
GLN 2770.0079
GLN 2780.0063
LYS 2790.0068
ASP 2800.0027
LEU 2810.0023
LYS 2820.0089
TRP 2830.0074
TRP 2840.0057
SER 2850.0125
ASN 2860.0135
ASN 2870.0117
HIS 2880.0099
GLY 2890.0138
ILE 2900.0174
ASN 2910.0277
ALA 2930.0398
ASN 2950.0312
TRP 2960.0184
PRO 2970.0195
SER 2980.0169

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.