CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602251019571912004

---  normal mode 101  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0805
VAL 2830.0271
GLY 2840.0139
ASN 2850.0092
THR 2860.0118
VAL 2870.0121
LEU 2880.0069
HIS 2890.0042
ALA 2900.0081
LEU 2910.0067
VAL 2920.0045
GLU 2930.0083
VAL 2940.0112
ALA 2950.0093
ASP 2960.0104
ASN 2970.0117
THR 2980.0223
VAL 2990.0146
ASP 3000.0156
ASN 3010.0109
THR 3020.0081
LYS 3030.0069
PHE 3040.0054
VAL 3050.0057
THR 3060.0047
SER 3070.0059
MET 3080.0050
TYR 3090.0029
ASN 3100.0080
GLU 3110.0144
ILE 3120.0123
LEU 3130.0038
ILE 3140.0061
LEU 3150.0103
GLY 3160.0060
ALA 3170.0040
LYS 3180.0056
LEU 3190.0083
HIS 3200.0039
PRO 3210.0025
THR 3220.0130
LEU 3230.0067
LYS 3240.0056
LEU 3250.0128
GLU 3260.0105
GLU 3270.0110
ILE 3280.0065
THR 3290.0056
ASN 3300.0031
ARG 3310.0354
LYS 3320.0366
GLY 3330.0415
LEU 3340.0100
THR 3350.0072
PRO 3360.0054
LEU 3370.0040
ALA 3380.0048
LEU 3390.0046
ALA 3400.0074
ALA 3410.0071
SER 3420.0102
SER 3430.0138
GLY 3440.0157
LYS 3450.0139
ILE 3460.0118
GLY 3470.0099
VAL 3480.0077
LEU 3490.0063
ALA 3500.0074
TYR 3510.0066
ILE 3520.0040
LEU 3530.0023
GLN 3540.0045
ARG 3550.0066
GLU 3560.0061
ILE 3570.0051
HIS 3580.0083
GLU 3590.0097
PRO 3600.0115
GLU 3610.0079
CYS 3620.0061
ARG 3630.0068
HIS 3640.0049
LEU 3650.0043
SER 3660.0042
ARG 3670.0004
LYS 3680.0026
PHE 3690.0050
THR 3700.0070
GLU 3710.0069
TRP 3720.0058
ALA 3730.0083
TYR 3740.0070
GLY 3750.0051
PRO 3760.0021
VAL 3770.0028
HIS 3780.0052
SER 3790.0045
SER 3800.0033
LEU 3810.0015
TYR 3820.0060
ASP 3830.0105
LEU 3840.0126
SER 3850.0119
CYS 3860.0121
ILE 3870.0128
ASP 3880.0161
THR 3890.0173
CYS 3900.0145
GLU 3910.0313
LYS 3920.0265
ASN 3930.0205
SER 3940.0136
VAL 3950.0091
LEU 3960.0091
GLU 3970.0130
VAL 3980.0101
ILE 3990.0023
ALA 4000.0048
TYR 4010.0094
SER 4020.0146
SER 4030.0133
SER 4040.0322
GLU 4050.0389
THR 4060.0200
PRO 4070.0238
ASN 4080.0205
ARG 4090.0065
HIS 4100.0113
ASP 4110.0202
MET 4120.0114
LEU 4130.0117
LEU 4140.0187
VAL 4150.0076
GLU 4160.0079
PRO 4170.0063
LEU 4180.0076
ASN 4190.0083
ARG 4200.0065
LEU 4210.0066
LEU 4220.0059
GLN 4230.0037
ASP 4240.0089
LYS 4250.0096
TRP 4260.0022
ASP 4270.0109
ARG 4280.0182
PHE 4290.0168
VAL 4300.0102
LYS 4310.0034
ARG 4320.0096
ILE 4330.0103
PHE 4340.0083
TYR 4350.0072
PHE 4360.0102
ASN 4370.0111
PHE 4380.0064
PHE 4390.0097
VAL 4400.0134
TYR 4410.0084
CYS 4420.0066
LEU 4430.0098
TYR 4440.0075
MET 4450.0053
ILE 4460.0068
ILE 4470.0063
PHE 4480.0067
THR 4490.0057
ALA 4500.0061
ALA 4510.0072
ALA 4520.0101
TYR 4530.0124
TYR 4540.0120
ARG 4550.0112
PRO 4560.0083
VAL 4570.0157
GLU 4580.0141
GLY 4590.0139
LEU 4600.0129
PRO 4610.0067
PRO 4620.0054
TYR 4630.0121
LYS 4640.0179
LEU 4650.0131
LYS 4660.0149
ASN 4670.0122
THR 4680.0092
VAL 4690.0094
GLY 4700.0161
ASP 4710.0128
TYR 4720.0024
PHE 4730.0095
ARG 4740.0117
VAL 4750.0067
THR 4760.0023
GLY 4770.0078
GLU 4780.0032
ILE 4790.0044
LEU 4800.0067
SER 4810.0043
VAL 4820.0073
SER 4830.0074
GLY 4840.0063
GLY 4850.0066
VAL 4860.0118
TYR 4870.0128
PHE 4880.0069
PHE 4890.0073
PHE 4900.0111
ARG 4910.0113
GLY 4920.0046
ILE 4930.0054
GLN 4940.0048
TYR 4950.0060
PHE 4960.0055
LEU 4970.0126
GLN 4980.0145
ARG 4990.0079
ARG 5000.0095
PRO 5010.0223
SER 5020.0082
LEU 5030.0295
LYS 5040.0219
SER 5050.0182
LEU 5060.0197
PHE 5070.0194
VAL 5080.0163
ASP 5090.0124
SER 5100.0075
TYR 5110.0084
SER 5120.0056
GLU 5130.0051
ILE 5140.0058
LEU 5150.0046
PHE 5160.0045
PHE 5170.0030
VAL 5180.0031
GLN 5190.0025
SER 5200.0060
LEU 5210.0095
PHE 5220.0093
MET 5230.0070
LEU 5240.0080
VAL 5250.0073
SER 5260.0044
VAL 5270.0046
VAL 5280.0032
LEU 5290.0064
TYR 5300.0068
PHE 5310.0059
SER 5320.0101
GLN 5330.0065
ARG 5340.0072
LYS 5350.0091
GLU 5360.0098
TYR 5370.0096
VAL 5380.0077
ALA 5390.0044
SER 5400.0082
MET 5410.0090
VAL 5420.0063
PHE 5430.0100
SER 5440.0077
LEU 5450.0070
ALA 5460.0084
MET 5470.0063
GLY 5480.0039
TRP 5490.0059
THR 5500.0051
ASN 5510.0041
MET 5520.0038
LEU 5530.0030
TYR 5540.0044
TYR 5550.0036
THR 5560.0112
ARG 5570.0100
GLY 5580.0123
PHE 5590.0170
GLN 5600.0176
GLN 5610.0190
MET 5620.0162
GLY 5630.0119
ILE 5640.0095
TYR 5650.0410
ALA 5660.0350
VAL 5670.0097
MET 5680.0088
ILE 5690.0148
GLU 5700.0154
LYS 5710.0081
MET 5720.0044
ILE 5730.0083
LEU 5740.0089
ARG 5750.0104
ASP 5760.0083
LEU 5770.0160
CYS 5780.0199
ARG 5790.0277
PHE 5800.0183
MET 5810.0128
PHE 5820.0122
VAL 5830.0112
TYR 5840.0116
LEU 5850.0092
VAL 5860.0104
PHE 5870.0097
LEU 5880.0111
PHE 5890.0141
GLY 5900.0121
PHE 5910.0085
SER 5920.0110
THR 5930.0119
ALA 5940.0109
VAL 5950.0087
VAL 5960.0097
THR 5970.0092
LEU 5980.0094
ILE 5990.0125
GLU 6000.0163
ASP 6010.0260
SER 6260.0130
TYR 6270.0063
ASN 6280.0081
SER 6290.0239
LEU 6300.0120
TYR 6310.0160
SER 6320.0071
THR 6330.0054
CYS 6340.0033
LEU 6350.0040
GLU 6360.0071
LEU 6370.0035
PHE 6380.0098
LYS 6390.0098
PHE 6400.0148
THR 6410.0193
ILE 6420.0230
GLY 6430.0355
MET 6440.0430
GLY 6450.0243
ASP 6460.0264
LEU 6470.0083
GLU 6480.0070
PHE 6490.0079
THR 6500.0106
GLU 6510.0125
ASN 6520.0137
TYR 6530.0131
ASP 6540.0085
PHE 6550.0071
LYS 6560.0074
ALA 6570.0111
VAL 6580.0089
PHE 6590.0038
ILE 6600.0029
ILE 6610.0026
LEU 6620.0039
LEU 6630.0043
LEU 6640.0052
ALA 6650.0039
TYR 6660.0037
VAL 6670.0057
ILE 6680.0071
LEU 6690.0070
THR 6700.0071
TYR 6710.0101
ILE 6720.0079
LEU 6730.0055
LEU 6740.0094
LEU 6750.0096
ASN 6760.0107
MET 6770.0178
LEU 6780.0104
ILE 6790.0113
ALA 6800.0150
LEU 6810.0103
MET 6820.0081
GLY 6830.0260
GLU 6840.0318
THR 6850.0205
VAL 6860.0194
ASN 6870.0189
LYS 6880.0162
ILE 6890.0087
ALA 6900.0127
GLN 6910.0122
GLU 6920.0058
SER 6930.0057
LYS 6940.0026
ASN 6950.0132
ILE 6960.0105
TRP 6970.0138
LYS 6980.0136
LEU 6990.0098
GLN 7000.0104
ARG 7010.0099
ALA 7020.0047
ILE 7030.0062
THR 7040.0120
ILE 7050.0079
LEU 7060.0125
ASP 7070.0237
THR 7080.0218
GLU 7090.0256
LYS 7100.0468
SER 7110.0458
PHE 7120.0407
LEU 7130.0449
LYS 7140.0227
CYS 7150.0287
MET 7160.0138
ARG 7170.0336
LYS 7180.0805
ALA 7190.0346
PHE 7200.0267
ARG 7210.0165
SER 7220.0170
GLY 7230.0147
LYS 7240.0171
LEU 7250.0376
LEU 7260.0257
TYR 7380.0192
ARG 7390.0200
TRP 7400.0183
CYS 7410.0142
PHE 7420.0082
ARG 7430.0046
VAL 7440.0038
ASP 7450.0047
GLU 7460.0038

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.