CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602251019571912004

---  normal mode 16  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0503
VAL 2830.0056
GLY 2840.0043
ASN 2850.0028
THR 2860.0017
VAL 2870.0021
LEU 2880.0029
HIS 2890.0033
ALA 2900.0037
LEU 2910.0043
VAL 2920.0051
GLU 2930.0056
VAL 2940.0063
ALA 2950.0074
ASP 2960.0086
ASN 2970.0089
THR 2980.0117
VAL 2990.0126
ASP 3000.0118
ASN 3010.0094
THR 3020.0093
LYS 3030.0099
PHE 3040.0079
VAL 3050.0067
THR 3060.0077
SER 3070.0075
MET 3080.0055
TYR 3090.0056
ASN 3100.0073
GLU 3110.0066
ILE 3120.0054
LEU 3130.0063
ILE 3140.0081
LEU 3150.0078
GLY 3160.0068
ALA 3170.0078
LYS 3180.0095
LEU 3190.0091
HIS 3200.0081
PRO 3210.0079
THR 3220.0074
LEU 3230.0061
LYS 3240.0047
LEU 3250.0040
GLU 3260.0035
GLU 3270.0028
ILE 3280.0021
THR 3290.0019
ASN 3300.0025
ARG 3310.0036
LYS 3320.0041
GLY 3330.0026
LEU 3340.0035
THR 3350.0032
PRO 3360.0036
LEU 3370.0045
ALA 3380.0047
LEU 3390.0046
ALA 3400.0051
ALA 3410.0053
SER 3420.0052
SER 3430.0054
GLY 3440.0059
LYS 3450.0061
ILE 3460.0063
GLY 3470.0067
VAL 3480.0058
LEU 3490.0057
ALA 3500.0065
TYR 3510.0061
ILE 3520.0053
LEU 3530.0058
GLN 3540.0060
ARG 3550.0069
GLU 3560.0077
ILE 3570.0076
HIS 3580.0097
GLU 3590.0107
PRO 3600.0110
GLU 3610.0097
CYS 3620.0084
ARG 3630.0076
HIS 3640.0061
LEU 3650.0057
SER 3660.0064
ARG 3670.0060
LYS 3680.0069
PHE 3690.0076
THR 3700.0086
GLU 3710.0095
TRP 3720.0112
ALA 3730.0126
TYR 3740.0150
GLY 3750.0159
PRO 3760.0143
VAL 3770.0123
HIS 3780.0103
SER 3790.0097
SER 3800.0081
LEU 3810.0077
TYR 3820.0069
ASP 3830.0069
LEU 3840.0072
SER 3850.0067
CYS 3860.0067
ILE 3870.0067
ASP 3880.0077
THR 3890.0081
CYS 3900.0074
GLU 3910.0086
LYS 3920.0069
ASN 3930.0071
SER 3940.0066
VAL 3950.0060
LEU 3960.0063
GLU 3970.0063
VAL 3980.0057
ILE 3990.0054
ALA 4000.0057
TYR 4010.0051
SER 4020.0046
SER 4030.0047
SER 4040.0044
GLU 4050.0050
THR 4060.0053
PRO 4070.0056
ASN 4080.0057
ARG 4090.0045
HIS 4100.0047
ASP 4110.0056
MET 4120.0050
LEU 4130.0051
LEU 4140.0051
VAL 4150.0049
GLU 4160.0056
PRO 4170.0058
LEU 4180.0056
ASN 4190.0062
ARG 4200.0067
LEU 4210.0063
LEU 4220.0063
GLN 4230.0058
ASP 4240.0060
LYS 4250.0073
TRP 4260.0071
ASP 4270.0067
ARG 4280.0075
PHE 4290.0091
VAL 4300.0092
LYS 4310.0089
ARG 4320.0104
ILE 4330.0117
PHE 4340.0113
TYR 4350.0120
PHE 4360.0145
ASN 4370.0143
PHE 4380.0143
PHE 4390.0166
VAL 4400.0168
TYR 4410.0158
CYS 4420.0171
LEU 4430.0175
TYR 4440.0160
MET 4450.0154
ILE 4460.0158
ILE 4470.0139
PHE 4480.0123
THR 4490.0126
ALA 4500.0106
ALA 4510.0059
ALA 4520.0070
TYR 4530.0097
TYR 4540.0063
ARG 4550.0050
PRO 4560.0095
VAL 4570.0153
GLU 4580.0174
GLY 4590.0165
LEU 4600.0124
PRO 4610.0094
PRO 4620.0112
TYR 4630.0160
LYS 4640.0226
LEU 4650.0208
LYS 4660.0253
ASN 4670.0286
THR 4680.0241
VAL 4690.0156
GLY 4700.0116
ASP 4710.0112
TYR 4720.0121
PHE 4730.0044
ARG 4740.0019
VAL 4750.0075
THR 4760.0108
GLY 4770.0094
GLU 4780.0072
ILE 4790.0113
LEU 4800.0140
SER 4810.0121
VAL 4820.0117
SER 4830.0130
GLY 4840.0140
GLY 4850.0129
VAL 4860.0124
TYR 4870.0123
PHE 4880.0121
PHE 4890.0117
PHE 4900.0107
ARG 4910.0101
GLY 4920.0091
ILE 4930.0089
GLN 4940.0083
TYR 4950.0066
PHE 4960.0069
LEU 4970.0081
GLN 4980.0072
ARG 4990.0061
ARG 5000.0066
PRO 5010.0059
SER 5020.0069
LEU 5030.0060
LYS 5040.0047
SER 5050.0030
LEU 5060.0034
PHE 5070.0022
VAL 5080.0035
ASP 5090.0026
SER 5100.0026
TYR 5110.0036
SER 5120.0037
GLU 5130.0043
ILE 5140.0072
LEU 5150.0094
PHE 5160.0108
PHE 5170.0111
VAL 5180.0115
GLN 5190.0125
SER 5200.0123
LEU 5210.0121
PHE 5220.0115
MET 5230.0112
LEU 5240.0110
VAL 5250.0102
SER 5260.0076
VAL 5270.0082
VAL 5280.0091
LEU 5290.0048
TYR 5300.0047
PHE 5310.0092
SER 5320.0079
GLN 5330.0075
ARG 5340.0033
LYS 5350.0058
GLU 5360.0060
TYR 5370.0043
VAL 5380.0056
ALA 5390.0089
SER 5400.0095
MET 5410.0088
VAL 5420.0101
PHE 5430.0118
SER 5440.0120
LEU 5450.0123
ALA 5460.0129
MET 5470.0132
GLY 5480.0138
TRP 5490.0146
THR 5500.0136
ASN 5510.0131
MET 5520.0142
LEU 5530.0126
TYR 5540.0111
TYR 5550.0115
THR 5560.0110
ARG 5570.0080
GLY 5580.0070
PHE 5590.0086
GLN 5600.0080
GLN 5610.0110
MET 5620.0121
GLY 5630.0103
ILE 5640.0115
TYR 5650.0132
ALA 5660.0112
VAL 5670.0090
MET 5680.0112
ILE 5690.0108
GLU 5700.0084
LYS 5710.0114
MET 5720.0106
ILE 5730.0117
LEU 5740.0117
ARG 5750.0114
ASP 5760.0117
LEU 5770.0208
CYS 5780.0225
ARG 5790.0195
PHE 5800.0300
MET 5810.0354
PHE 5820.0366
VAL 5830.0382
TYR 5840.0390
LEU 5850.0415
VAL 5860.0414
PHE 5870.0402
LEU 5880.0373
PHE 5890.0385
GLY 5900.0403
PHE 5910.0342
SER 5920.0274
THR 5930.0283
ALA 5940.0315
VAL 5950.0221
VAL 5960.0134
THR 5970.0219
LEU 5980.0284
ILE 5990.0210
GLU 6000.0241
ASP 6010.0320
SER 6260.0254
TYR 6270.0115
ASN 6280.0086
SER 6290.0125
LEU 6300.0181
TYR 6310.0269
SER 6320.0189
THR 6330.0139
CYS 6340.0262
LEU 6350.0255
GLU 6360.0166
LEU 6370.0242
PHE 6380.0299
LYS 6390.0259
PHE 6400.0282
THR 6410.0364
ILE 6420.0352
GLY 6430.0302
MET 6440.0211
GLY 6450.0175
ASP 6460.0088
LEU 6470.0158
GLU 6480.0154
PHE 6490.0076
THR 6500.0178
GLU 6510.0317
ASN 6520.0318
TYR 6530.0322
ASP 6540.0438
PHE 6550.0500
LYS 6560.0429
ALA 6570.0503
VAL 6580.0468
PHE 6590.0327
ILE 6600.0340
ILE 6610.0438
LEU 6620.0372
LEU 6630.0296
LEU 6640.0362
ALA 6650.0422
TYR 6660.0380
VAL 6670.0363
ILE 6680.0404
LEU 6690.0435
THR 6700.0417
TYR 6710.0395
ILE 6720.0413
LEU 6730.0413
LEU 6740.0392
LEU 6750.0396
ASN 6760.0379
MET 6770.0267
LEU 6780.0273
ILE 6790.0275
ALA 6800.0148
LEU 6810.0133
MET 6820.0185
GLY 6830.0159
GLU 6840.0142
THR 6850.0149
VAL 6860.0184
ASN 6870.0217
LYS 6880.0187
ILE 6890.0146
ALA 6900.0151
GLN 6910.0135
GLU 6920.0095
SER 6930.0096
LYS 6940.0094
ASN 6950.0055
ILE 6960.0052
TRP 6970.0060
LYS 6980.0046
LEU 6990.0045
GLN 7000.0059
ARG 7010.0063
ALA 7020.0057
ILE 7030.0070
THR 7040.0082
ILE 7050.0077
LEU 7060.0081
ASP 7070.0101
THR 7080.0102
GLU 7090.0100
LYS 7100.0102
SER 7110.0127
PHE 7120.0135
LEU 7130.0170
LYS 7140.0170
CYS 7150.0189
MET 7160.0175
ARG 7170.0159
LYS 7180.0137
ALA 7190.0110
PHE 7200.0102
ARG 7210.0087
SER 7220.0098
GLY 7230.0097
LYS 7240.0113
LEU 7250.0109
LEU 7260.0098
TYR 7380.0090
ARG 7390.0083
TRP 7400.0090
CYS 7410.0081
PHE 7420.0082
ARG 7430.0083
VAL 7440.0084
ASP 7450.0099
GLU 7460.0087

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.