CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602251019571912004

---  normal mode 25  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1031
VAL 2830.0123
GLY 2840.0101
ASN 2850.0087
THR 2860.0098
VAL 2870.0091
LEU 2880.0084
HIS 2890.0068
ALA 2900.0076
LEU 2910.0065
VAL 2920.0071
GLU 2930.0085
VAL 2940.0119
ALA 2950.0151
ASP 2960.0192
ASN 2970.0196
THR 2980.0398
VAL 2990.0506
ASP 3000.0501
ASN 3010.0295
THR 3020.0250
LYS 3030.0299
PHE 3040.0172
VAL 3050.0111
THR 3060.0142
SER 3070.0101
MET 3080.0064
TYR 3090.0080
ASN 3100.0131
GLU 3110.0167
ILE 3120.0162
LEU 3130.0134
ILE 3140.0253
LEU 3150.0320
GLY 3160.0227
ALA 3170.0050
LYS 3180.0182
LEU 3190.0254
HIS 3200.0287
PRO 3210.0212
THR 3220.0440
LEU 3230.0376
LYS 3240.0244
LEU 3250.0130
GLU 3260.0085
GLU 3270.0145
ILE 3280.0114
THR 3290.0094
ASN 3300.0081
ARG 3310.0078
LYS 3320.0085
GLY 3330.0072
LEU 3340.0059
THR 3350.0066
PRO 3360.0063
LEU 3370.0057
ALA 3380.0048
LEU 3390.0045
ALA 3400.0045
ALA 3410.0038
SER 3420.0017
SER 3430.0014
GLY 3440.0036
LYS 3450.0061
ILE 3460.0076
GLY 3470.0110
VAL 3480.0095
LEU 3490.0076
ALA 3500.0079
TYR 3510.0080
ILE 3520.0080
LEU 3530.0074
GLN 3540.0058
ARG 3550.0123
GLU 3560.0122
ILE 3570.0214
HIS 3580.0589
GLU 3590.0838
PRO 3600.1031
GLU 3610.0609
CYS 3620.0369
ARG 3630.0434
HIS 3640.0341
LEU 3650.0136
SER 3660.0108
ARG 3670.0041
LYS 3680.0042
PHE 3690.0087
THR 3700.0057
GLU 3710.0094
TRP 3720.0136
ALA 3730.0202
TYR 3740.0253
GLY 3750.0256
PRO 3760.0216
VAL 3770.0173
HIS 3780.0114
SER 3790.0088
SER 3800.0053
LEU 3810.0047
TYR 3820.0070
ASP 3830.0085
LEU 3840.0077
SER 3850.0087
CYS 3860.0069
ILE 3870.0049
ASP 3880.0022
THR 3890.0021
CYS 3900.0021
GLU 3910.0057
LYS 3920.0027
ASN 3930.0042
SER 3940.0032
VAL 3950.0030
LEU 3960.0018
GLU 3970.0017
VAL 3980.0014
ILE 3990.0018
ALA 4000.0048
TYR 4010.0051
SER 4020.0046
SER 4030.0072
SER 4040.0082
GLU 4050.0054
THR 4060.0026
PRO 4070.0019
ASN 4080.0025
ARG 4090.0025
HIS 4100.0028
ASP 4110.0027
MET 4120.0030
LEU 4130.0027
LEU 4140.0026
VAL 4150.0055
GLU 4160.0048
PRO 4170.0054
LEU 4180.0042
ASN 4190.0042
ARG 4200.0041
LEU 4210.0035
LEU 4220.0019
GLN 4230.0021
ASP 4240.0048
LYS 4250.0041
TRP 4260.0031
ASP 4270.0042
ARG 4280.0067
PHE 4290.0077
VAL 4300.0054
LYS 4310.0048
ARG 4320.0051
ILE 4330.0064
PHE 4340.0065
TYR 4350.0072
PHE 4360.0071
ASN 4370.0055
PHE 4380.0054
PHE 4390.0072
VAL 4400.0079
TYR 4410.0060
CYS 4420.0054
LEU 4430.0087
TYR 4440.0097
MET 4450.0088
ILE 4460.0099
ILE 4470.0113
PHE 4480.0116
THR 4490.0120
ALA 4500.0127
ALA 4510.0111
ALA 4520.0117
TYR 4530.0134
TYR 4540.0098
ARG 4550.0081
PRO 4560.0066
VAL 4570.0142
GLU 4580.0154
GLY 4590.0178
LEU 4600.0125
PRO 4610.0067
PRO 4620.0036
TYR 4630.0084
LYS 4640.0123
LEU 4650.0109
LYS 4660.0149
ASN 4670.0191
THR 4680.0137
VAL 4690.0137
GLY 4700.0068
ASP 4710.0054
TYR 4720.0119
PHE 4730.0127
ARG 4740.0079
VAL 4750.0056
THR 4760.0094
GLY 4770.0109
GLU 4780.0092
ILE 4790.0100
LEU 4800.0114
SER 4810.0122
VAL 4820.0133
SER 4830.0133
GLY 4840.0116
GLY 4850.0114
VAL 4860.0123
TYR 4870.0102
PHE 4880.0063
PHE 4890.0070
PHE 4900.0067
ARG 4910.0049
GLY 4920.0045
ILE 4930.0030
GLN 4940.0045
TYR 4950.0065
PHE 4960.0076
LEU 4970.0084
GLN 4980.0124
ARG 4990.0159
ARG 5000.0169
PRO 5010.0196
SER 5020.0419
LEU 5030.0420
LYS 5040.0494
SER 5050.0238
LEU 5060.0161
PHE 5070.0090
VAL 5080.0175
ASP 5090.0144
SER 5100.0088
TYR 5110.0061
SER 5120.0059
GLU 5130.0043
ILE 5140.0016
LEU 5150.0015
PHE 5160.0035
PHE 5170.0051
VAL 5180.0060
GLN 5190.0074
SER 5200.0097
LEU 5210.0102
PHE 5220.0103
MET 5230.0125
LEU 5240.0133
VAL 5250.0134
SER 5260.0128
VAL 5270.0122
VAL 5280.0134
LEU 5290.0112
TYR 5300.0072
PHE 5310.0060
SER 5320.0078
GLN 5330.0071
ARG 5340.0123
LYS 5350.0117
GLU 5360.0150
TYR 5370.0120
VAL 5380.0103
ALA 5390.0122
SER 5400.0125
MET 5410.0108
VAL 5420.0106
PHE 5430.0104
SER 5440.0103
LEU 5450.0101
ALA 5460.0087
MET 5470.0068
GLY 5480.0075
TRP 5490.0063
THR 5500.0023
ASN 5510.0025
MET 5520.0031
LEU 5530.0052
TYR 5540.0048
TYR 5550.0063
THR 5560.0079
ARG 5570.0072
GLY 5580.0071
PHE 5590.0077
GLN 5600.0083
GLN 5610.0105
MET 5620.0101
GLY 5630.0088
ILE 5640.0097
TYR 5650.0109
ALA 5660.0098
VAL 5670.0091
MET 5680.0100
ILE 5690.0113
GLU 5700.0114
LYS 5710.0113
MET 5720.0106
ILE 5730.0132
LEU 5740.0137
ARG 5750.0126
ASP 5760.0118
LEU 5770.0124
CYS 5780.0163
ARG 5790.0139
PHE 5800.0078
MET 5810.0084
PHE 5820.0094
VAL 5830.0052
TYR 5840.0021
LEU 5850.0032
VAL 5860.0013
PHE 5870.0016
LEU 5880.0022
PHE 5890.0037
GLY 5900.0040
PHE 5910.0033
SER 5920.0035
THR 5930.0044
ALA 5940.0039
VAL 5950.0024
VAL 5960.0030
THR 5970.0034
LEU 5980.0022
ILE 5990.0009
GLU 6000.0021
ASP 6010.0044
SER 6260.0063
TYR 6270.0044
ASN 6280.0045
SER 6290.0049
LEU 6300.0049
TYR 6310.0058
SER 6320.0041
THR 6330.0027
CYS 6340.0036
LEU 6350.0030
GLU 6360.0016
LEU 6370.0020
PHE 6380.0024
LYS 6390.0022
PHE 6400.0023
THR 6410.0032
ILE 6420.0037
GLY 6430.0036
MET 6440.0020
GLY 6450.0012
ASP 6460.0008
LEU 6470.0014
GLU 6480.0026
PHE 6490.0025
THR 6500.0035
GLU 6510.0047
ASN 6520.0039
TYR 6530.0019
ASP 6540.0031
PHE 6550.0049
LYS 6560.0046
ALA 6570.0059
VAL 6580.0049
PHE 6590.0025
ILE 6600.0030
ILE 6610.0040
LEU 6620.0029
LEU 6630.0018
LEU 6640.0021
ALA 6650.0024
TYR 6660.0024
VAL 6670.0023
ILE 6680.0024
LEU 6690.0020
THR 6700.0020
TYR 6710.0027
ILE 6720.0034
LEU 6730.0031
LEU 6740.0025
LEU 6750.0021
ASN 6760.0048
MET 6770.0070
LEU 6780.0034
ILE 6790.0047
ALA 6800.0102
LEU 6810.0097
MET 6820.0045
GLY 6830.0103
GLU 6840.0153
THR 6850.0106
VAL 6860.0029
ASN 6870.0103
LYS 6880.0122
ILE 6890.0077
ALA 6900.0047
GLN 6910.0059
GLU 6920.0075
SER 6930.0077
LYS 6940.0066
ASN 6950.0056
ILE 6960.0056
TRP 6970.0059
LYS 6980.0040
LEU 6990.0042
GLN 7000.0051
ARG 7010.0054
ALA 7020.0048
ILE 7030.0063
THR 7040.0068
ILE 7050.0054
LEU 7060.0063
ASP 7070.0113
THR 7080.0105
GLU 7090.0102
LYS 7100.0148
SER 7110.0231
PHE 7120.0238
LEU 7130.0408
LYS 7140.0486
CYS 7150.0611
MET 7160.0532
ARG 7170.0416
LYS 7180.0390
ALA 7190.0183
PHE 7200.0144
ARG 7210.0133
SER 7220.0140
GLY 7230.0178
LYS 7240.0296
LEU 7250.0401
LEU 7260.0440
TYR 7380.0255
ARG 7390.0181
TRP 7400.0124
CYS 7410.0115
PHE 7420.0089
ARG 7430.0051
VAL 7440.0073
ASP 7450.0097
GLU 7460.0091

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.