CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602251019571912004

---  normal mode 32  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0832
VAL 2830.0634
GLY 2840.0444
ASN 2850.0337
THR 2860.0240
VAL 2870.0218
LEU 2880.0171
HIS 2890.0134
ALA 2900.0137
LEU 2910.0123
VAL 2920.0114
GLU 2930.0095
VAL 2940.0094
ALA 2950.0072
ASP 2960.0089
ASN 2970.0205
THR 2980.0438
VAL 2990.0639
ASP 3000.0565
ASN 3010.0243
THR 3020.0276
LYS 3030.0332
PHE 3040.0162
VAL 3050.0131
THR 3060.0197
SER 3070.0148
MET 3080.0125
TYR 3090.0161
ASN 3100.0127
GLU 3110.0089
ILE 3120.0111
LEU 3130.0091
ILE 3140.0158
LEU 3150.0241
GLY 3160.0259
ALA 3170.0214
LYS 3180.0373
LEU 3190.0492
HIS 3200.0356
PRO 3210.0195
THR 3220.0147
LEU 3230.0216
LYS 3240.0194
LEU 3250.0165
GLU 3260.0178
GLU 3270.0244
ILE 3280.0177
THR 3290.0136
ASN 3300.0151
ARG 3310.0228
LYS 3320.0288
GLY 3330.0169
LEU 3340.0137
THR 3350.0125
PRO 3360.0128
LEU 3370.0115
ALA 3380.0120
LEU 3390.0137
ALA 3400.0151
ALA 3410.0133
SER 3420.0144
SER 3430.0149
GLY 3440.0166
LYS 3450.0154
ILE 3460.0176
GLY 3470.0179
VAL 3480.0182
LEU 3490.0147
ALA 3500.0128
TYR 3510.0146
ILE 3520.0098
LEU 3530.0055
GLN 3540.0087
ARG 3550.0083
GLU 3560.0067
ILE 3570.0022
HIS 3580.0187
GLU 3590.0361
PRO 3600.0548
GLU 3610.0315
CYS 3620.0213
ARG 3630.0184
HIS 3640.0109
LEU 3650.0035
SER 3660.0037
ARG 3670.0073
LYS 3680.0116
PHE 3690.0137
THR 3700.0198
GLU 3710.0172
TRP 3720.0136
ALA 3730.0104
TYR 3740.0232
GLY 3750.0332
PRO 3760.0447
VAL 3770.0285
HIS 3780.0137
SER 3790.0108
SER 3800.0131
LEU 3810.0152
TYR 3820.0115
ASP 3830.0114
LEU 3840.0086
SER 3850.0078
CYS 3860.0036
ILE 3870.0021
ASP 3880.0025
THR 3890.0098
CYS 3900.0093
GLU 3910.0281
LYS 3920.0148
ASN 3930.0112
SER 3940.0055
VAL 3950.0047
LEU 3960.0036
GLU 3970.0071
VAL 3980.0084
ILE 3990.0078
ALA 4000.0035
TYR 4010.0077
SER 4020.0087
SER 4030.0135
SER 4040.0088
GLU 4050.0143
THR 4060.0138
PRO 4070.0142
ASN 4080.0128
ARG 4090.0095
HIS 4100.0082
ASP 4110.0086
MET 4120.0089
LEU 4130.0052
LEU 4140.0070
VAL 4150.0060
GLU 4160.0076
PRO 4170.0064
LEU 4180.0033
ASN 4190.0042
ARG 4200.0068
LEU 4210.0050
LEU 4220.0046
GLN 4230.0053
ASP 4240.0052
LYS 4250.0051
TRP 4260.0057
ASP 4270.0046
ARG 4280.0046
PHE 4290.0045
VAL 4300.0059
LYS 4310.0067
ARG 4320.0071
ILE 4330.0076
PHE 4340.0075
TYR 4350.0081
PHE 4360.0090
ASN 4370.0082
PHE 4380.0073
PHE 4390.0064
VAL 4400.0053
TYR 4410.0042
CYS 4420.0029
LEU 4430.0007
TYR 4440.0008
MET 4450.0018
ILE 4460.0043
ILE 4470.0052
PHE 4480.0041
THR 4490.0039
ALA 4500.0053
ALA 4510.0050
ALA 4520.0038
TYR 4530.0035
TYR 4540.0032
ARG 4550.0026
PRO 4560.0022
VAL 4570.0041
GLU 4580.0044
GLY 4590.0038
LEU 4600.0043
PRO 4610.0041
PRO 4620.0048
TYR 4630.0071
LYS 4640.0101
LEU 4650.0053
LYS 4660.0089
ASN 4670.0082
THR 4680.0130
VAL 4690.0137
GLY 4700.0154
ASP 4710.0077
TYR 4720.0081
PHE 4730.0139
ARG 4740.0100
VAL 4750.0082
THR 4760.0125
GLY 4770.0097
GLU 4780.0068
ILE 4790.0089
LEU 4800.0076
SER 4810.0045
VAL 4820.0050
SER 4830.0046
GLY 4840.0020
GLY 4850.0021
VAL 4860.0029
TYR 4870.0041
PHE 4880.0036
PHE 4890.0030
PHE 4900.0056
ARG 4910.0067
GLY 4920.0044
ILE 4930.0058
GLN 4940.0087
TYR 4950.0087
PHE 4960.0083
LEU 4970.0110
GLN 4980.0136
ARG 4990.0136
ARG 5000.0140
PRO 5010.0127
SER 5020.0201
LEU 5030.0166
LYS 5040.0167
SER 5050.0061
LEU 5060.0036
PHE 5070.0027
VAL 5080.0059
ASP 5090.0067
SER 5100.0064
TYR 5110.0055
SER 5120.0064
GLU 5130.0056
ILE 5140.0031
LEU 5150.0034
PHE 5160.0035
PHE 5170.0019
VAL 5180.0009
GLN 5190.0016
SER 5200.0011
LEU 5210.0014
PHE 5220.0028
MET 5230.0034
LEU 5240.0031
VAL 5250.0039
SER 5260.0042
VAL 5270.0041
VAL 5280.0046
LEU 5290.0046
TYR 5300.0044
PHE 5310.0053
SER 5320.0057
GLN 5330.0047
ARG 5340.0040
LYS 5350.0031
GLU 5360.0039
TYR 5370.0044
VAL 5380.0039
ALA 5390.0045
SER 5400.0042
MET 5410.0037
VAL 5420.0041
PHE 5430.0035
SER 5440.0026
LEU 5450.0032
ALA 5460.0038
MET 5470.0030
GLY 5480.0021
TRP 5490.0040
THR 5500.0049
ASN 5510.0046
MET 5520.0053
LEU 5530.0066
TYR 5540.0067
TYR 5550.0070
THR 5560.0071
ARG 5570.0065
GLY 5580.0066
PHE 5590.0071
GLN 5600.0074
GLN 5610.0078
MET 5620.0075
GLY 5630.0067
ILE 5640.0064
TYR 5650.0068
ALA 5660.0071
VAL 5670.0068
MET 5680.0070
ILE 5690.0072
GLU 5700.0073
LYS 5710.0066
MET 5720.0066
ILE 5730.0066
LEU 5740.0053
ARG 5750.0047
ASP 5760.0046
LEU 5770.0045
CYS 5780.0051
ARG 5790.0045
PHE 5800.0032
MET 5810.0048
PHE 5820.0068
VAL 5830.0044
TYR 5840.0025
LEU 5850.0043
VAL 5860.0031
PHE 5870.0013
LEU 5880.0022
PHE 5890.0023
GLY 5900.0022
PHE 5910.0022
SER 5920.0025
THR 5930.0029
ALA 5940.0030
VAL 5950.0026
VAL 5960.0026
THR 5970.0032
LEU 5980.0031
ILE 5990.0029
GLU 6000.0042
ASP 6010.0067
SER 6260.0059
TYR 6270.0041
ASN 6280.0041
SER 6290.0027
LEU 6300.0022
TYR 6310.0021
SER 6320.0020
THR 6330.0019
CYS 6340.0022
LEU 6350.0019
GLU 6360.0023
LEU 6370.0028
PHE 6380.0031
LYS 6390.0034
PHE 6400.0036
THR 6410.0036
ILE 6420.0051
GLY 6430.0056
MET 6440.0045
GLY 6450.0038
ASP 6460.0041
LEU 6470.0053
GLU 6480.0056
PHE 6490.0045
THR 6500.0055
GLU 6510.0064
ASN 6520.0051
TYR 6530.0034
ASP 6540.0037
PHE 6550.0055
LYS 6560.0061
ALA 6570.0076
VAL 6580.0064
PHE 6590.0044
ILE 6600.0054
ILE 6610.0061
LEU 6620.0041
LEU 6630.0034
LEU 6640.0039
ALA 6650.0032
TYR 6660.0027
VAL 6670.0018
ILE 6680.0011
LEU 6690.0018
THR 6700.0011
TYR 6710.0025
ILE 6720.0038
LEU 6730.0041
LEU 6740.0039
LEU 6750.0048
ASN 6760.0081
MET 6770.0094
LEU 6780.0071
ILE 6790.0102
ALA 6800.0115
LEU 6810.0099
MET 6820.0082
GLY 6830.0079
GLU 6840.0082
THR 6850.0076
VAL 6860.0039
ASN 6870.0034
LYS 6880.0083
ILE 6890.0076
ALA 6900.0055
GLN 6910.0085
GLU 6920.0084
SER 6930.0062
LYS 6940.0066
ASN 6950.0062
ILE 6960.0055
TRP 6970.0053
LYS 6980.0050
LEU 6990.0045
GLN 7000.0055
ARG 7010.0065
ALA 7020.0060
ILE 7030.0065
THR 7040.0075
ILE 7050.0076
LEU 7060.0073
ASP 7070.0096
THR 7080.0074
GLU 7090.0061
LYS 7100.0088
SER 7110.0142
PHE 7120.0098
LEU 7130.0286
LYS 7140.0531
CYS 7150.0832
MET 7160.0647
ARG 7170.0489
LYS 7180.0416
ALA 7190.0096
PHE 7200.0081
ARG 7210.0061
SER 7220.0215
GLY 7230.0299
LYS 7240.0587
LEU 7250.0714
LEU 7260.0766
TYR 7380.0315
ARG 7390.0187
TRP 7400.0181
CYS 7410.0195
PHE 7420.0133
ARG 7430.0116
VAL 7440.0114
ASP 7450.0100
GLU 7460.0113

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.