CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602251019571912004

---  normal mode 35  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0543
VAL 2830.0543
GLY 2840.0392
ASN 2850.0225
THR 2860.0156
VAL 2870.0116
LEU 2880.0087
HIS 2890.0079
ALA 2900.0063
LEU 2910.0063
VAL 2920.0058
GLU 2930.0049
VAL 2940.0051
ALA 2950.0113
ASP 2960.0101
ASN 2970.0072
THR 2980.0246
VAL 2990.0391
ASP 3000.0447
ASN 3010.0234
THR 3020.0138
LYS 3030.0209
PHE 3040.0186
VAL 3050.0127
THR 3060.0094
SER 3070.0121
MET 3080.0124
TYR 3090.0098
ASN 3100.0102
GLU 3110.0102
ILE 3120.0114
LEU 3130.0120
ILE 3140.0107
LEU 3150.0112
GLY 3160.0152
ALA 3170.0140
LYS 3180.0136
LEU 3190.0182
HIS 3200.0193
PRO 3210.0143
THR 3220.0142
LEU 3230.0169
LYS 3240.0171
LEU 3250.0156
GLU 3260.0163
GLU 3270.0208
ILE 3280.0186
THR 3290.0194
ASN 3300.0207
ARG 3310.0446
LYS 3320.0451
GLY 3330.0354
LEU 3340.0110
THR 3350.0114
PRO 3360.0080
LEU 3370.0081
ALA 3380.0068
LEU 3390.0052
ALA 3400.0060
ALA 3410.0080
SER 3420.0078
SER 3430.0088
GLY 3440.0078
LYS 3450.0065
ILE 3460.0065
GLY 3470.0046
VAL 3480.0042
LEU 3490.0064
ALA 3500.0074
TYR 3510.0076
ILE 3520.0077
LEU 3530.0077
GLN 3540.0074
ARG 3550.0092
GLU 3560.0074
ILE 3570.0065
HIS 3580.0099
GLU 3590.0133
PRO 3600.0179
GLU 3610.0128
CYS 3620.0095
ARG 3630.0102
HIS 3640.0119
LEU 3650.0105
SER 3660.0099
ARG 3670.0084
LYS 3680.0074
PHE 3690.0060
THR 3700.0023
GLU 3710.0020
TRP 3720.0025
ALA 3730.0071
TYR 3740.0097
GLY 3750.0106
PRO 3760.0071
VAL 3770.0055
HIS 3780.0028
SER 3790.0022
SER 3800.0031
LEU 3810.0037
TYR 3820.0049
ASP 3830.0070
LEU 3840.0077
SER 3850.0073
CYS 3860.0065
ILE 3870.0071
ASP 3880.0067
THR 3890.0069
CYS 3900.0060
GLU 3910.0196
LYS 3920.0134
ASN 3930.0085
SER 3940.0052
VAL 3950.0060
LEU 3960.0075
GLU 3970.0069
VAL 3980.0061
ILE 3990.0082
ALA 4000.0102
TYR 4010.0102
SER 4020.0103
SER 4030.0124
SER 4040.0103
GLU 4050.0102
THR 4060.0104
PRO 4070.0104
ASN 4080.0107
ARG 4090.0106
HIS 4100.0124
ASP 4110.0140
MET 4120.0087
LEU 4130.0092
LEU 4140.0105
VAL 4150.0062
GLU 4160.0056
PRO 4170.0057
LEU 4180.0061
ASN 4190.0060
ARG 4200.0050
LEU 4210.0065
LEU 4220.0068
GLN 4230.0057
ASP 4240.0066
LYS 4250.0084
TRP 4260.0087
ASP 4270.0082
ARG 4280.0084
PHE 4290.0111
VAL 4300.0121
LYS 4310.0106
ARG 4320.0117
ILE 4330.0138
PHE 4340.0126
TYR 4350.0117
PHE 4360.0168
ASN 4370.0160
PHE 4380.0124
PHE 4390.0140
VAL 4400.0151
TYR 4410.0115
CYS 4420.0110
LEU 4430.0126
TYR 4440.0090
MET 4450.0072
ILE 4460.0092
ILE 4470.0085
PHE 4480.0056
THR 4490.0062
ALA 4500.0083
ALA 4510.0083
ALA 4520.0065
TYR 4530.0096
TYR 4540.0106
ARG 4550.0082
PRO 4560.0082
VAL 4570.0119
GLU 4580.0110
GLY 4590.0092
LEU 4600.0108
PRO 4610.0088
PRO 4620.0080
TYR 4630.0094
LYS 4640.0095
LEU 4650.0110
LYS 4660.0142
ASN 4670.0207
THR 4680.0219
VAL 4690.0226
GLY 4700.0172
ASP 4710.0114
TYR 4720.0152
PHE 4730.0123
ARG 4740.0090
VAL 4750.0089
THR 4760.0090
GLY 4770.0073
GLU 4780.0076
ILE 4790.0073
LEU 4800.0062
SER 4810.0057
VAL 4820.0061
SER 4830.0074
GLY 4840.0067
GLY 4850.0064
VAL 4860.0083
TYR 4870.0086
PHE 4880.0071
PHE 4890.0075
PHE 4900.0076
ARG 4910.0076
GLY 4920.0079
ILE 4930.0066
GLN 4940.0099
TYR 4950.0091
PHE 4960.0120
LEU 4970.0162
GLN 4980.0184
ARG 4990.0189
ARG 5000.0237
PRO 5010.0241
SER 5020.0319
LEU 5030.0294
LYS 5040.0405
SER 5050.0227
LEU 5060.0156
PHE 5070.0162
VAL 5080.0142
ASP 5090.0122
SER 5100.0107
TYR 5110.0110
SER 5120.0103
GLU 5130.0070
ILE 5140.0060
LEU 5150.0071
PHE 5160.0049
PHE 5170.0045
VAL 5180.0044
GLN 5190.0043
SER 5200.0048
LEU 5210.0062
PHE 5220.0047
MET 5230.0039
LEU 5240.0059
VAL 5250.0066
SER 5260.0039
VAL 5270.0038
VAL 5280.0052
LEU 5290.0043
TYR 5300.0043
PHE 5310.0042
SER 5320.0034
GLN 5330.0051
ARG 5340.0068
LYS 5350.0080
GLU 5360.0082
TYR 5370.0057
VAL 5380.0066
ALA 5390.0083
SER 5400.0059
MET 5410.0032
VAL 5420.0053
PHE 5430.0050
SER 5440.0009
LEU 5450.0024
ALA 5460.0030
MET 5470.0021
GLY 5480.0048
TRP 5490.0045
THR 5500.0050
ASN 5510.0075
MET 5520.0080
LEU 5530.0115
TYR 5540.0110
TYR 5550.0104
THR 5560.0162
ARG 5570.0145
GLY 5580.0151
PHE 5590.0210
GLN 5600.0268
GLN 5610.0345
MET 5620.0315
GLY 5630.0262
ILE 5640.0313
TYR 5650.0341
ALA 5660.0283
VAL 5670.0233
MET 5680.0270
ILE 5690.0283
GLU 5700.0210
LYS 5710.0192
MET 5720.0237
ILE 5730.0280
LEU 5740.0190
ARG 5750.0170
ASP 5760.0270
LEU 5770.0410
CYS 5780.0492
ARG 5790.0406
PHE 5800.0340
MET 5810.0412
PHE 5820.0500
VAL 5830.0322
TYR 5840.0181
LEU 5850.0220
VAL 5860.0200
PHE 5870.0130
LEU 5880.0027
PHE 5890.0073
GLY 5900.0089
PHE 5910.0104
SER 5920.0121
THR 5930.0149
ALA 5940.0126
VAL 5950.0103
VAL 5960.0131
THR 5970.0167
LEU 5980.0159
ILE 5990.0065
GLU 6000.0047
ASP 6010.0056
SER 6260.0209
TYR 6270.0146
ASN 6280.0139
SER 6290.0168
LEU 6300.0181
TYR 6310.0208
SER 6320.0150
THR 6330.0111
CYS 6340.0120
LEU 6350.0102
GLU 6360.0080
LEU 6370.0080
PHE 6380.0063
LYS 6390.0101
PHE 6400.0109
THR 6410.0132
ILE 6420.0176
GLY 6430.0199
MET 6440.0113
GLY 6450.0080
ASP 6460.0071
LEU 6470.0054
GLU 6480.0069
PHE 6490.0087
THR 6500.0135
GLU 6510.0210
ASN 6520.0144
TYR 6530.0140
ASP 6540.0265
PHE 6550.0328
LYS 6560.0235
ALA 6570.0248
VAL 6580.0231
PHE 6590.0100
ILE 6600.0051
ILE 6610.0099
LEU 6620.0106
LEU 6630.0089
LEU 6640.0093
ALA 6650.0152
TYR 6660.0118
VAL 6670.0142
ILE 6680.0211
LEU 6690.0165
THR 6700.0084
TYR 6710.0126
ILE 6720.0174
LEU 6730.0171
LEU 6740.0111
LEU 6750.0026
ASN 6760.0043
MET 6770.0152
LEU 6780.0194
ILE 6790.0127
ALA 6800.0110
LEU 6810.0192
MET 6820.0240
GLY 6830.0185
GLU 6840.0086
THR 6850.0135
VAL 6860.0258
ASN 6870.0249
LYS 6880.0178
ILE 6890.0217
ALA 6900.0299
GLN 6910.0296
GLU 6920.0217
SER 6930.0239
LYS 6940.0280
ASN 6950.0182
ILE 6960.0162
TRP 6970.0180
LYS 6980.0142
LEU 6990.0128
GLN 7000.0124
ARG 7010.0119
ALA 7020.0114
ILE 7030.0116
THR 7040.0113
ILE 7050.0104
LEU 7060.0109
ASP 7070.0146
THR 7080.0140
GLU 7090.0126
LYS 7100.0157
SER 7110.0204
PHE 7120.0205
LEU 7130.0329
LYS 7140.0289
CYS 7150.0128
MET 7160.0216
ARG 7170.0150
LYS 7180.0239
ALA 7190.0087
PHE 7200.0066
ARG 7210.0051
SER 7220.0056
GLY 7230.0102
LYS 7240.0163
LEU 7250.0230
LEU 7260.0269
TYR 7380.0177
ARG 7390.0144
TRP 7400.0089
CYS 7410.0050
PHE 7420.0033
ARG 7430.0019
VAL 7440.0029
ASP 7450.0023
GLU 7460.0033

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.