CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602251019571912004

---  normal mode 36  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0904
VAL 2830.0462
GLY 2840.0340
ASN 2850.0195
THR 2860.0142
VAL 2870.0117
LEU 2880.0066
HIS 2890.0075
ALA 2900.0080
LEU 2910.0058
VAL 2920.0042
GLU 2930.0039
VAL 2940.0033
ALA 2950.0063
ASP 2960.0098
ASN 2970.0073
THR 2980.0174
VAL 2990.0218
ASP 3000.0215
ASN 3010.0110
THR 3020.0079
LYS 3030.0096
PHE 3040.0017
VAL 3050.0008
THR 3060.0033
SER 3070.0039
MET 3080.0038
TYR 3090.0024
ASN 3100.0037
GLU 3110.0057
ILE 3120.0045
LEU 3130.0019
ILE 3140.0040
LEU 3150.0044
GLY 3160.0028
ALA 3170.0034
LYS 3180.0057
LEU 3190.0076
HIS 3200.0051
PRO 3210.0029
THR 3220.0039
LEU 3230.0070
LYS 3240.0087
LEU 3250.0084
GLU 3260.0104
GLU 3270.0149
ILE 3280.0145
THR 3290.0160
ASN 3300.0171
ARG 3310.0361
LYS 3320.0327
GLY 3330.0272
LEU 3340.0086
THR 3350.0091
PRO 3360.0058
LEU 3370.0063
ALA 3380.0071
LEU 3390.0055
ALA 3400.0053
ALA 3410.0062
SER 3420.0065
SER 3430.0071
GLY 3440.0064
LYS 3450.0050
ILE 3460.0034
GLY 3470.0028
VAL 3480.0025
LEU 3490.0049
ALA 3500.0050
TYR 3510.0042
ILE 3520.0055
LEU 3530.0055
GLN 3540.0059
ARG 3550.0109
GLU 3560.0106
ILE 3570.0097
HIS 3580.0126
GLU 3590.0075
PRO 3600.0075
GLU 3610.0085
CYS 3620.0067
ARG 3630.0055
HIS 3640.0061
LEU 3650.0063
SER 3660.0066
ARG 3670.0062
LYS 3680.0080
PHE 3690.0125
THR 3700.0462
GLU 3710.0495
TRP 3720.0430
ALA 3730.0644
TYR 3740.0239
GLY 3750.0436
PRO 3760.0904
VAL 3770.0654
HIS 3780.0223
SER 3790.0119
SER 3800.0038
LEU 3810.0065
TYR 3820.0040
ASP 3830.0054
LEU 3840.0089
SER 3850.0086
CYS 3860.0071
ILE 3870.0076
ASP 3880.0080
THR 3890.0082
CYS 3900.0080
GLU 3910.0043
LYS 3920.0076
ASN 3930.0077
SER 3940.0057
VAL 3950.0060
LEU 3960.0052
GLU 3970.0049
VAL 3980.0052
ILE 3990.0052
ALA 4000.0041
TYR 4010.0034
SER 4020.0045
SER 4030.0065
SER 4040.0059
GLU 4050.0104
THR 4060.0070
PRO 4070.0067
ASN 4080.0060
ARG 4090.0050
HIS 4100.0042
ASP 4110.0048
MET 4120.0059
LEU 4130.0057
LEU 4140.0064
VAL 4150.0096
GLU 4160.0103
PRO 4170.0094
LEU 4180.0091
ASN 4190.0103
ARG 4200.0124
LEU 4210.0102
LEU 4220.0074
GLN 4230.0075
ASP 4240.0102
LYS 4250.0082
TRP 4260.0052
ASP 4270.0090
ARG 4280.0132
PHE 4290.0124
VAL 4300.0079
LYS 4310.0070
ARG 4320.0106
ILE 4330.0114
PHE 4340.0107
TYR 4350.0106
PHE 4360.0110
ASN 4370.0122
PHE 4380.0121
PHE 4390.0123
VAL 4400.0112
TYR 4410.0108
CYS 4420.0088
LEU 4430.0043
TYR 4440.0033
MET 4450.0046
ILE 4460.0076
ILE 4470.0073
PHE 4480.0051
THR 4490.0092
ALA 4500.0131
ALA 4510.0110
ALA 4520.0072
TYR 4530.0141
TYR 4540.0126
ARG 4550.0067
PRO 4560.0034
VAL 4570.0099
GLU 4580.0100
GLY 4590.0086
LEU 4600.0048
PRO 4610.0008
PRO 4620.0036
TYR 4630.0152
LYS 4640.0255
LEU 4650.0182
LYS 4660.0232
ASN 4670.0234
THR 4680.0175
VAL 4690.0115
GLY 4700.0210
ASP 4710.0071
TYR 4720.0139
PHE 4730.0243
ARG 4740.0188
VAL 4750.0140
THR 4760.0211
GLY 4770.0166
GLU 4780.0086
ILE 4790.0116
LEU 4800.0084
SER 4810.0038
VAL 4820.0073
SER 4830.0090
GLY 4840.0074
GLY 4850.0073
VAL 4860.0102
TYR 4870.0116
PHE 4880.0112
PHE 4890.0110
PHE 4900.0112
ARG 4910.0126
GLY 4920.0110
ILE 4930.0102
GLN 4940.0108
TYR 4950.0107
PHE 4960.0101
LEU 4970.0115
GLN 4980.0125
ARG 4990.0115
ARG 5000.0125
PRO 5010.0110
SER 5020.0048
LEU 5030.0074
LYS 5040.0090
SER 5050.0025
LEU 5060.0020
PHE 5070.0022
VAL 5080.0045
ASP 5090.0039
SER 5100.0058
TYR 5110.0043
SER 5120.0063
GLU 5130.0065
ILE 5140.0077
LEU 5150.0083
PHE 5160.0100
PHE 5170.0101
VAL 5180.0090
GLN 5190.0077
SER 5200.0075
LEU 5210.0074
PHE 5220.0052
MET 5230.0039
LEU 5240.0058
VAL 5250.0037
SER 5260.0048
VAL 5270.0068
VAL 5280.0084
LEU 5290.0078
TYR 5300.0048
PHE 5310.0067
SER 5320.0096
GLN 5330.0063
ARG 5340.0081
LYS 5350.0054
GLU 5360.0072
TYR 5370.0053
VAL 5380.0035
ALA 5390.0032
SER 5400.0031
MET 5410.0031
VAL 5420.0060
PHE 5430.0072
SER 5440.0058
LEU 5450.0061
ALA 5460.0104
MET 5470.0097
GLY 5480.0077
TRP 5490.0102
THR 5500.0119
ASN 5510.0123
MET 5520.0125
LEU 5530.0117
TYR 5540.0113
TYR 5550.0122
THR 5560.0109
ARG 5570.0078
GLY 5580.0068
PHE 5590.0096
GLN 5600.0096
GLN 5610.0132
MET 5620.0134
GLY 5630.0096
ILE 5640.0104
TYR 5650.0110
ALA 5660.0079
VAL 5670.0060
MET 5680.0067
ILE 5690.0050
GLU 5700.0038
LYS 5710.0079
MET 5720.0093
ILE 5730.0087
LEU 5740.0094
ARG 5750.0125
ASP 5760.0143
LEU 5770.0161
CYS 5780.0218
ARG 5790.0254
PHE 5800.0203
MET 5810.0197
PHE 5820.0251
VAL 5830.0164
TYR 5840.0096
LEU 5850.0126
VAL 5860.0051
PHE 5870.0014
LEU 5880.0037
PHE 5890.0047
GLY 5900.0062
PHE 5910.0060
SER 5920.0066
THR 5930.0085
ALA 5940.0089
VAL 5950.0067
VAL 5960.0084
THR 5970.0098
LEU 5980.0091
ILE 5990.0082
GLU 6000.0123
ASP 6010.0191
SER 6260.0141
TYR 6270.0105
ASN 6280.0135
SER 6290.0122
LEU 6300.0114
TYR 6310.0134
SER 6320.0084
THR 6330.0066
CYS 6340.0095
LEU 6350.0082
GLU 6360.0056
LEU 6370.0068
PHE 6380.0088
LYS 6390.0091
PHE 6400.0082
THR 6410.0076
ILE 6420.0119
GLY 6430.0125
MET 6440.0116
GLY 6450.0074
ASP 6460.0039
LEU 6470.0038
GLU 6480.0038
PHE 6490.0034
THR 6500.0073
GLU 6510.0097
ASN 6520.0114
TYR 6530.0071
ASP 6540.0044
PHE 6550.0046
LYS 6560.0057
ALA 6570.0098
VAL 6580.0093
PHE 6590.0057
ILE 6600.0067
ILE 6610.0096
LEU 6620.0076
LEU 6630.0061
LEU 6640.0069
ALA 6650.0045
TYR 6660.0044
VAL 6670.0053
ILE 6680.0059
LEU 6690.0036
THR 6700.0020
TYR 6710.0031
ILE 6720.0083
LEU 6730.0103
LEU 6740.0106
LEU 6750.0096
ASN 6760.0117
MET 6770.0172
LEU 6780.0184
ILE 6790.0198
ALA 6800.0193
LEU 6810.0189
MET 6820.0212
GLY 6830.0343
GLU 6840.0265
THR 6850.0091
VAL 6860.0210
ASN 6870.0321
LYS 6880.0199
ILE 6890.0070
ALA 6900.0098
GLN 6910.0082
GLU 6920.0082
SER 6930.0078
LYS 6940.0082
ASN 6950.0052
ILE 6960.0037
TRP 6970.0041
LYS 6980.0016
LEU 6990.0004
GLN 7000.0030
ARG 7010.0036
ALA 7020.0031
ILE 7030.0036
THR 7040.0038
ILE 7050.0037
LEU 7060.0037
ASP 7070.0060
THR 7080.0042
GLU 7090.0034
LYS 7100.0110
SER 7110.0165
PHE 7120.0165
LEU 7130.0560
LYS 7140.0372
CYS 7150.0261
MET 7160.0206
ARG 7170.0393
LYS 7180.0441
ALA 7190.0129
PHE 7200.0139
ARG 7210.0117
SER 7220.0107
GLY 7230.0095
LYS 7240.0090
LEU 7250.0104
LEU 7260.0167
TYR 7380.0103
ARG 7390.0098
TRP 7400.0094
CYS 7410.0074
PHE 7420.0120
ARG 7430.0146
VAL 7440.0156
ASP 7450.0210
GLU 7460.0295

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.