CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602251019571912004

---  normal mode 46  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0628
VAL 2830.0250
GLY 2840.0278
ASN 2850.0303
THR 2860.0287
VAL 2870.0249
LEU 2880.0194
HIS 2890.0178
ALA 2900.0193
LEU 2910.0139
VAL 2920.0112
GLU 2930.0140
VAL 2940.0140
ALA 2950.0105
ASP 2960.0194
ASN 2970.0208
THR 2980.0341
VAL 2990.0451
ASP 3000.0374
ASN 3010.0143
THR 3020.0174
LYS 3030.0197
PHE 3040.0125
VAL 3050.0037
THR 3060.0029
SER 3070.0059
MET 3080.0045
TYR 3090.0053
ASN 3100.0068
GLU 3110.0057
ILE 3120.0067
LEU 3130.0086
ILE 3140.0087
LEU 3150.0092
GLY 3160.0096
ALA 3170.0094
LYS 3180.0093
LEU 3190.0074
HIS 3200.0068
PRO 3210.0127
THR 3220.0147
LEU 3230.0125
LYS 3240.0161
LEU 3250.0149
GLU 3260.0157
GLU 3270.0222
ILE 3280.0260
THR 3290.0231
ASN 3300.0221
ARG 3310.0513
LYS 3320.0549
GLY 3330.0244
LEU 3340.0202
THR 3350.0178
PRO 3360.0167
LEU 3370.0090
ALA 3380.0089
LEU 3390.0083
ALA 3400.0043
ALA 3410.0025
SER 3420.0024
SER 3430.0070
GLY 3440.0055
LYS 3450.0068
ILE 3460.0066
GLY 3470.0062
VAL 3480.0044
LEU 3490.0023
ALA 3500.0029
TYR 3510.0032
ILE 3520.0065
LEU 3530.0073
GLN 3540.0083
ARG 3550.0169
GLU 3560.0183
ILE 3570.0163
HIS 3580.0212
GLU 3590.0318
PRO 3600.0357
GLU 3610.0184
CYS 3620.0158
ARG 3630.0122
HIS 3640.0096
LEU 3650.0122
SER 3660.0152
ARG 3670.0125
LYS 3680.0145
PHE 3690.0163
THR 3700.0175
GLU 3710.0151
TRP 3720.0084
ALA 3730.0119
TYR 3740.0130
GLY 3750.0234
PRO 3760.0138
VAL 3770.0096
HIS 3780.0126
SER 3790.0147
SER 3800.0162
LEU 3810.0173
TYR 3820.0121
ASP 3830.0125
LEU 3840.0136
SER 3850.0070
CYS 3860.0056
ILE 3870.0065
ASP 3880.0089
THR 3890.0093
CYS 3900.0138
GLU 3910.0335
LYS 3920.0257
ASN 3930.0148
SER 3940.0056
VAL 3950.0037
LEU 3960.0053
GLU 3970.0076
VAL 3980.0061
ILE 3990.0057
ALA 4000.0086
TYR 4010.0103
SER 4020.0108
SER 4030.0152
SER 4040.0119
GLU 4050.0154
THR 4060.0055
PRO 4070.0038
ASN 4080.0024
ARG 4090.0050
HIS 4100.0029
ASP 4110.0018
MET 4120.0031
LEU 4130.0032
LEU 4140.0026
VAL 4150.0068
GLU 4160.0071
PRO 4170.0066
LEU 4180.0059
ASN 4190.0061
ARG 4200.0059
LEU 4210.0106
LEU 4220.0106
GLN 4230.0123
ASP 4240.0181
LYS 4250.0194
TRP 4260.0177
ASP 4270.0217
ARG 4280.0254
PHE 4290.0256
VAL 4300.0235
LYS 4310.0213
ARG 4320.0284
ILE 4330.0256
PHE 4340.0185
TYR 4350.0146
PHE 4360.0165
ASN 4370.0181
PHE 4380.0127
PHE 4390.0147
VAL 4400.0180
TYR 4410.0162
CYS 4420.0189
LEU 4430.0202
TYR 4440.0138
MET 4450.0117
ILE 4460.0124
ILE 4470.0069
PHE 4480.0030
THR 4490.0052
ALA 4500.0051
ALA 4510.0129
ALA 4520.0073
TYR 4530.0236
TYR 4540.0250
ARG 4550.0148
PRO 4560.0138
VAL 4570.0120
GLU 4580.0050
GLY 4590.0139
LEU 4600.0183
PRO 4610.0094
PRO 4620.0166
TYR 4630.0032
LYS 4640.0017
LEU 4650.0011
LYS 4660.0093
ASN 4670.0179
THR 4680.0215
VAL 4690.0182
GLY 4700.0190
ASP 4710.0100
TYR 4720.0037
PHE 4730.0056
ARG 4740.0156
VAL 4750.0162
THR 4760.0133
GLY 4770.0092
GLU 4780.0148
ILE 4790.0214
LEU 4800.0174
SER 4810.0084
VAL 4820.0136
SER 4830.0167
GLY 4840.0121
GLY 4850.0091
VAL 4860.0149
TYR 4870.0148
PHE 4880.0092
PHE 4890.0099
PHE 4900.0134
ARG 4910.0126
GLY 4920.0075
ILE 4930.0130
GLN 4940.0176
TYR 4950.0137
PHE 4960.0120
LEU 4970.0182
GLN 4980.0206
ARG 4990.0175
ARG 5000.0194
PRO 5010.0151
SER 5020.0197
LEU 5030.0145
LYS 5040.0097
SER 5050.0081
LEU 5060.0039
PHE 5070.0065
VAL 5080.0102
ASP 5090.0104
SER 5100.0091
TYR 5110.0080
SER 5120.0079
GLU 5130.0069
ILE 5140.0035
LEU 5150.0066
PHE 5160.0053
PHE 5170.0026
VAL 5180.0054
GLN 5190.0034
SER 5200.0069
LEU 5210.0108
PHE 5220.0107
MET 5230.0101
LEU 5240.0127
VAL 5250.0136
SER 5260.0110
VAL 5270.0100
VAL 5280.0050
LEU 5290.0031
TYR 5300.0055
PHE 5310.0163
SER 5320.0193
GLN 5330.0216
ARG 5340.0180
LYS 5350.0140
GLU 5360.0150
TYR 5370.0075
VAL 5380.0121
ALA 5390.0107
SER 5400.0098
MET 5410.0078
VAL 5420.0060
PHE 5430.0078
SER 5440.0044
LEU 5450.0039
ALA 5460.0094
MET 5470.0080
GLY 5480.0074
TRP 5490.0138
THR 5500.0135
ASN 5510.0121
MET 5520.0151
LEU 5530.0113
TYR 5540.0114
TYR 5550.0108
THR 5560.0055
ARG 5570.0044
GLY 5580.0059
PHE 5590.0070
GLN 5600.0099
GLN 5610.0135
MET 5620.0065
GLY 5630.0048
ILE 5640.0088
TYR 5650.0101
ALA 5660.0094
VAL 5670.0069
MET 5680.0058
ILE 5690.0079
GLU 5700.0066
LYS 5710.0029
MET 5720.0024
ILE 5730.0029
LEU 5740.0029
ARG 5750.0060
ASP 5760.0076
LEU 5770.0096
CYS 5780.0107
ARG 5790.0122
PHE 5800.0118
MET 5810.0115
PHE 5820.0092
VAL 5830.0037
TYR 5840.0043
LEU 5850.0074
VAL 5860.0072
PHE 5870.0058
LEU 5880.0062
PHE 5890.0109
GLY 5900.0121
PHE 5910.0099
SER 5920.0089
THR 5930.0096
ALA 5940.0099
VAL 5950.0057
VAL 5960.0022
THR 5970.0050
LEU 5980.0100
ILE 5990.0084
GLU 6000.0128
ASP 6010.0183
SER 6260.0110
TYR 6270.0056
ASN 6280.0068
SER 6290.0036
LEU 6300.0059
TYR 6310.0099
SER 6320.0050
THR 6330.0049
CYS 6340.0085
LEU 6350.0072
GLU 6360.0070
LEU 6370.0068
PHE 6380.0062
LYS 6390.0062
PHE 6400.0036
THR 6410.0062
ILE 6420.0104
GLY 6430.0061
MET 6440.0076
GLY 6450.0066
ASP 6460.0090
LEU 6470.0091
GLU 6480.0087
PHE 6490.0078
THR 6500.0045
GLU 6510.0045
ASN 6520.0079
TYR 6530.0088
ASP 6540.0129
PHE 6550.0158
LYS 6560.0134
ALA 6570.0168
VAL 6580.0115
PHE 6590.0057
ILE 6600.0092
ILE 6610.0077
LEU 6620.0048
LEU 6630.0059
LEU 6640.0059
ALA 6650.0109
TYR 6660.0075
VAL 6670.0064
ILE 6680.0144
LEU 6690.0109
THR 6700.0074
TYR 6710.0116
ILE 6720.0185
LEU 6730.0174
LEU 6740.0134
LEU 6750.0183
ASN 6760.0238
MET 6770.0188
LEU 6780.0196
ILE 6790.0234
ALA 6800.0183
LEU 6810.0188
MET 6820.0186
GLY 6830.0154
GLU 6840.0172
THR 6850.0191
VAL 6860.0130
ASN 6870.0110
LYS 6880.0194
ILE 6890.0161
ALA 6900.0123
GLN 6910.0178
GLU 6920.0135
SER 6930.0102
LYS 6940.0120
ASN 6950.0077
ILE 6960.0048
TRP 6970.0047
LYS 6980.0046
LEU 6990.0049
GLN 7000.0061
ARG 7010.0079
ALA 7020.0091
ILE 7030.0107
THR 7040.0134
ILE 7050.0144
LEU 7060.0147
ASP 7070.0154
THR 7080.0169
GLU 7090.0192
LYS 7100.0137
SER 7110.0157
PHE 7120.0153
LEU 7130.0183
LYS 7140.0363
CYS 7150.0628
MET 7160.0210
ARG 7170.0226
LYS 7180.0211
ALA 7190.0249
PHE 7200.0235
ARG 7210.0213
SER 7220.0247
GLY 7230.0141
LYS 7240.0155
LEU 7250.0342
LEU 7260.0561
TYR 7380.0244
ARG 7390.0155
TRP 7400.0130
CYS 7410.0146
PHE 7420.0140
ARG 7430.0158
VAL 7440.0147
ASP 7450.0164
GLU 7460.0166

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.