CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602251019571912004

---  normal mode 50  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0517
VAL 2830.0475
GLY 2840.0263
ASN 2850.0189
THR 2860.0069
VAL 2870.0096
LEU 2880.0092
HIS 2890.0083
ALA 2900.0143
LEU 2910.0160
VAL 2920.0074
GLU 2930.0117
VAL 2940.0188
ALA 2950.0099
ASP 2960.0118
ASN 2970.0123
THR 2980.0354
VAL 2990.0398
ASP 3000.0233
ASN 3010.0099
THR 3020.0128
LYS 3030.0214
PHE 3040.0266
VAL 3050.0213
THR 3060.0262
SER 3070.0363
MET 3080.0318
TYR 3090.0240
ASN 3100.0319
GLU 3110.0350
ILE 3120.0243
LEU 3130.0144
ILE 3140.0178
LEU 3150.0148
GLY 3160.0102
ALA 3170.0076
LYS 3180.0045
LEU 3190.0099
HIS 3200.0087
PRO 3210.0061
THR 3220.0105
LEU 3230.0054
LYS 3240.0060
LEU 3250.0066
GLU 3260.0087
GLU 3270.0069
ILE 3280.0024
THR 3290.0036
ASN 3300.0043
ARG 3310.0135
LYS 3320.0276
GLY 3330.0182
LEU 3340.0039
THR 3350.0045
PRO 3360.0048
LEU 3370.0073
ALA 3380.0080
LEU 3390.0057
ALA 3400.0079
ALA 3410.0101
SER 3420.0108
SER 3430.0100
GLY 3440.0118
LYS 3450.0076
ILE 3460.0096
GLY 3470.0057
VAL 3480.0057
LEU 3490.0086
ALA 3500.0110
TYR 3510.0112
ILE 3520.0095
LEU 3530.0092
GLN 3540.0091
ARG 3550.0112
GLU 3560.0069
ILE 3570.0083
HIS 3580.0155
GLU 3590.0189
PRO 3600.0165
GLU 3610.0068
CYS 3620.0074
ARG 3630.0057
HIS 3640.0100
LEU 3650.0122
SER 3660.0089
ARG 3670.0075
LYS 3680.0056
PHE 3690.0051
THR 3700.0132
GLU 3710.0153
TRP 3720.0108
ALA 3730.0067
TYR 3740.0117
GLY 3750.0191
PRO 3760.0111
VAL 3770.0072
HIS 3780.0067
SER 3790.0104
SER 3800.0095
LEU 3810.0085
TYR 3820.0087
ASP 3830.0089
LEU 3840.0099
SER 3850.0103
CYS 3860.0093
ILE 3870.0082
ASP 3880.0054
THR 3890.0064
CYS 3900.0100
GLU 3910.0131
LYS 3920.0110
ASN 3930.0083
SER 3940.0078
VAL 3950.0083
LEU 3960.0061
GLU 3970.0079
VAL 3980.0091
ILE 3990.0089
ALA 4000.0078
TYR 4010.0106
SER 4020.0122
SER 4030.0183
SER 4040.0166
GLU 4050.0174
THR 4060.0112
PRO 4070.0096
ASN 4080.0079
ARG 4090.0085
HIS 4100.0058
ASP 4110.0057
MET 4120.0080
LEU 4130.0066
LEU 4140.0062
VAL 4150.0080
GLU 4160.0088
PRO 4170.0096
LEU 4180.0093
ASN 4190.0086
ARG 4200.0112
LEU 4210.0113
LEU 4220.0090
GLN 4230.0140
ASP 4240.0170
LYS 4250.0140
TRP 4260.0150
ASP 4270.0230
ARG 4280.0227
PHE 4290.0215
VAL 4300.0178
LYS 4310.0218
ARG 4320.0305
ILE 4330.0255
PHE 4340.0189
TYR 4350.0229
PHE 4360.0309
ASN 4370.0252
PHE 4380.0166
PHE 4390.0241
VAL 4400.0252
TYR 4410.0165
CYS 4420.0170
LEU 4430.0194
TYR 4440.0174
MET 4450.0107
ILE 4460.0120
ILE 4470.0123
PHE 4480.0114
THR 4490.0096
ALA 4500.0087
ALA 4510.0033
ALA 4520.0078
TYR 4530.0157
TYR 4540.0155
ARG 4550.0145
PRO 4560.0146
VAL 4570.0195
GLU 4580.0205
GLY 4590.0209
LEU 4600.0205
PRO 4610.0203
PRO 4620.0242
TYR 4630.0207
LYS 4640.0145
LEU 4650.0097
LYS 4660.0069
ASN 4670.0129
THR 4680.0193
VAL 4690.0228
GLY 4700.0249
ASP 4710.0188
TYR 4720.0176
PHE 4730.0223
ARG 4740.0216
VAL 4750.0177
THR 4760.0139
GLY 4770.0084
GLU 4780.0129
ILE 4790.0162
LEU 4800.0150
SER 4810.0162
VAL 4820.0178
SER 4830.0231
GLY 4840.0197
GLY 4850.0134
VAL 4860.0139
TYR 4870.0172
PHE 4880.0119
PHE 4890.0083
PHE 4900.0140
ARG 4910.0196
GLY 4920.0183
ILE 4930.0195
GLN 4940.0217
TYR 4950.0219
PHE 4960.0197
LEU 4970.0202
GLN 4980.0149
ARG 4990.0127
ARG 5000.0254
PRO 5010.0232
SER 5020.0356
LEU 5030.0513
LYS 5040.0515
SER 5050.0290
LEU 5060.0276
PHE 5070.0311
VAL 5080.0330
ASP 5090.0275
SER 5100.0239
TYR 5110.0176
SER 5120.0158
GLU 5130.0139
ILE 5140.0135
LEU 5150.0104
PHE 5160.0090
PHE 5170.0104
VAL 5180.0104
GLN 5190.0047
SER 5200.0049
LEU 5210.0106
PHE 5220.0132
MET 5230.0113
LEU 5240.0151
VAL 5250.0188
SER 5260.0186
VAL 5270.0228
VAL 5280.0223
LEU 5290.0109
TYR 5300.0149
PHE 5310.0133
SER 5320.0074
GLN 5330.0100
ARG 5340.0055
LYS 5350.0085
GLU 5360.0054
TYR 5370.0114
VAL 5380.0138
ALA 5390.0126
SER 5400.0151
MET 5410.0125
VAL 5420.0127
PHE 5430.0126
SER 5440.0082
LEU 5450.0077
ALA 5460.0051
MET 5470.0027
GLY 5480.0036
TRP 5490.0046
THR 5500.0056
ASN 5510.0052
MET 5520.0067
LEU 5530.0111
TYR 5540.0108
TYR 5550.0112
THR 5560.0124
ARG 5570.0096
GLY 5580.0076
PHE 5590.0110
GLN 5600.0115
GLN 5610.0145
MET 5620.0202
GLY 5630.0161
ILE 5640.0188
TYR 5650.0241
ALA 5660.0189
VAL 5670.0118
MET 5680.0161
ILE 5690.0161
GLU 5700.0096
LYS 5710.0119
MET 5720.0122
ILE 5730.0103
LEU 5740.0089
ARG 5750.0092
ASP 5760.0144
LEU 5770.0193
CYS 5780.0211
ARG 5790.0154
PHE 5800.0147
MET 5810.0156
PHE 5820.0148
VAL 5830.0109
TYR 5840.0086
LEU 5850.0075
VAL 5860.0081
PHE 5870.0054
LEU 5880.0021
PHE 5890.0034
GLY 5900.0050
PHE 5910.0035
SER 5920.0051
THR 5930.0054
ALA 5940.0054
VAL 5950.0056
VAL 5960.0049
THR 5970.0080
LEU 5980.0126
ILE 5990.0092
GLU 6000.0150
ASP 6010.0238
SER 6260.0072
TYR 6270.0031
ASN 6280.0074
SER 6290.0080
LEU 6300.0105
TYR 6310.0120
SER 6320.0082
THR 6330.0065
CYS 6340.0083
LEU 6350.0095
GLU 6360.0067
LEU 6370.0048
PHE 6380.0064
LYS 6390.0085
PHE 6400.0061
THR 6410.0069
ILE 6420.0137
GLY 6430.0151
MET 6440.0134
GLY 6450.0062
ASP 6460.0031
LEU 6470.0058
GLU 6480.0065
PHE 6490.0052
THR 6500.0065
GLU 6510.0078
ASN 6520.0111
TYR 6530.0087
ASP 6540.0088
PHE 6550.0110
LYS 6560.0097
ALA 6570.0169
VAL 6580.0152
PHE 6590.0077
ILE 6600.0095
ILE 6610.0115
LEU 6620.0046
LEU 6630.0036
LEU 6640.0046
ALA 6650.0056
TYR 6660.0036
VAL 6670.0041
ILE 6680.0108
LEU 6690.0101
THR 6700.0078
TYR 6710.0079
ILE 6720.0112
LEU 6730.0112
LEU 6740.0068
LEU 6750.0130
ASN 6760.0137
MET 6770.0158
LEU 6780.0139
ILE 6790.0290
ALA 6800.0316
LEU 6810.0228
MET 6820.0178
GLY 6830.0299
GLU 6840.0331
THR 6850.0208
VAL 6860.0074
ASN 6870.0125
LYS 6880.0287
ILE 6890.0258
ALA 6900.0270
GLN 6910.0325
GLU 6920.0204
SER 6930.0197
LYS 6940.0226
ASN 6950.0098
ILE 6960.0096
TRP 6970.0104
LYS 6980.0046
LEU 6990.0024
GLN 7000.0051
ARG 7010.0050
ALA 7020.0044
ILE 7030.0025
THR 7040.0083
ILE 7050.0082
LEU 7060.0046
ASP 7070.0105
THR 7080.0123
GLU 7090.0091
LYS 7100.0082
SER 7110.0155
PHE 7120.0157
LEU 7130.0279
LYS 7140.0241
CYS 7150.0517
MET 7160.0170
ARG 7170.0208
LYS 7180.0074
ALA 7190.0089
PHE 7200.0085
ARG 7210.0080
SER 7220.0065
GLY 7230.0058
LYS 7240.0118
LEU 7250.0182
LEU 7260.0254
TYR 7380.0120
ARG 7390.0115
TRP 7400.0067
CYS 7410.0073
PHE 7420.0085
ARG 7430.0102
VAL 7440.0122
ASP 7450.0125
GLU 7460.0137

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.