CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602251019571912004

---  normal mode 64  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0808
VAL 2830.0767
GLY 2840.0517
ASN 2850.0179
THR 2860.0161
VAL 2870.0135
LEU 2880.0112
HIS 2890.0109
ALA 2900.0092
LEU 2910.0027
VAL 2920.0039
GLU 2930.0085
VAL 2940.0091
ALA 2950.0080
ASP 2960.0057
ASN 2970.0062
THR 2980.0153
VAL 2990.0277
ASP 3000.0148
ASN 3010.0064
THR 3020.0141
LYS 3030.0154
PHE 3040.0164
VAL 3050.0127
THR 3060.0145
SER 3070.0185
MET 3080.0142
TYR 3090.0083
ASN 3100.0125
GLU 3110.0125
ILE 3120.0066
LEU 3130.0050
ILE 3140.0069
LEU 3150.0055
GLY 3160.0063
ALA 3170.0071
LYS 3180.0059
LEU 3190.0133
HIS 3200.0112
PRO 3210.0141
THR 3220.0186
LEU 3230.0096
LYS 3240.0150
LEU 3250.0140
GLU 3260.0128
GLU 3270.0189
ILE 3280.0194
THR 3290.0193
ASN 3300.0198
ARG 3310.0277
LYS 3320.0243
GLY 3330.0343
LEU 3340.0165
THR 3350.0131
PRO 3360.0095
LEU 3370.0042
ALA 3380.0040
LEU 3390.0048
ALA 3400.0066
ALA 3410.0071
SER 3420.0097
SER 3430.0106
GLY 3440.0067
LYS 3450.0047
ILE 3460.0040
GLY 3470.0075
VAL 3480.0066
LEU 3490.0051
ALA 3500.0066
TYR 3510.0071
ILE 3520.0034
LEU 3530.0050
GLN 3540.0063
ARG 3550.0056
GLU 3560.0044
ILE 3570.0040
HIS 3580.0098
GLU 3590.0145
PRO 3600.0141
GLU 3610.0161
CYS 3620.0108
ARG 3630.0079
HIS 3640.0093
LEU 3650.0066
SER 3660.0053
ARG 3670.0084
LYS 3680.0088
PHE 3690.0090
THR 3700.0150
GLU 3710.0222
TRP 3720.0175
ALA 3730.0060
TYR 3740.0178
GLY 3750.0232
PRO 3760.0283
VAL 3770.0215
HIS 3780.0136
SER 3790.0163
SER 3800.0139
LEU 3810.0147
TYR 3820.0081
ASP 3830.0082
LEU 3840.0084
SER 3850.0069
CYS 3860.0071
ILE 3870.0073
ASP 3880.0072
THR 3890.0087
CYS 3900.0088
GLU 3910.0102
LYS 3920.0062
ASN 3930.0063
SER 3940.0050
VAL 3950.0049
LEU 3960.0049
GLU 3970.0076
VAL 3980.0077
ILE 3990.0067
ALA 4000.0064
TYR 4010.0119
SER 4020.0191
SER 4030.0537
SER 4040.0427
GLU 4050.0808
THR 4060.0230
PRO 4070.0215
ASN 4080.0146
ARG 4090.0118
HIS 4100.0143
ASP 4110.0130
MET 4120.0043
LEU 4130.0049
LEU 4140.0043
VAL 4150.0056
GLU 4160.0063
PRO 4170.0053
LEU 4180.0043
ASN 4190.0064
ARG 4200.0059
LEU 4210.0054
LEU 4220.0061
GLN 4230.0058
ASP 4240.0074
LYS 4250.0085
TRP 4260.0075
ASP 4270.0088
ARG 4280.0112
PHE 4290.0151
VAL 4300.0135
LYS 4310.0102
ARG 4320.0212
ILE 4330.0205
PHE 4340.0140
TYR 4350.0104
PHE 4360.0173
ASN 4370.0174
PHE 4380.0117
PHE 4390.0103
VAL 4400.0097
TYR 4410.0080
CYS 4420.0101
LEU 4430.0093
TYR 4440.0066
MET 4450.0082
ILE 4460.0090
ILE 4470.0085
PHE 4480.0085
THR 4490.0067
ALA 4500.0113
ALA 4510.0138
ALA 4520.0212
TYR 4530.0325
TYR 4540.0185
ARG 4550.0051
PRO 4560.0071
VAL 4570.0052
GLU 4580.0023
GLY 4590.0020
LEU 4600.0253
PRO 4610.0137
PRO 4620.0240
TYR 4630.0064
LYS 4640.0136
LEU 4650.0132
LYS 4660.0204
ASN 4670.0200
THR 4680.0308
VAL 4690.0270
GLY 4700.0336
ASP 4710.0271
TYR 4720.0173
PHE 4730.0210
ARG 4740.0229
VAL 4750.0197
THR 4760.0185
GLY 4770.0122
GLU 4780.0126
ILE 4790.0161
LEU 4800.0096
SER 4810.0086
VAL 4820.0105
SER 4830.0071
GLY 4840.0077
GLY 4850.0057
VAL 4860.0059
TYR 4870.0113
PHE 4880.0067
PHE 4890.0077
PHE 4900.0157
ARG 4910.0164
GLY 4920.0137
ILE 4930.0202
GLN 4940.0241
TYR 4950.0169
PHE 4960.0145
LEU 4970.0246
GLN 4980.0233
ARG 4990.0132
ARG 5000.0163
PRO 5010.0110
SER 5020.0305
LEU 5030.0067
LYS 5040.0374
SER 5050.0215
LEU 5060.0127
PHE 5070.0190
VAL 5080.0186
ASP 5090.0132
SER 5100.0085
TYR 5110.0104
SER 5120.0082
GLU 5130.0085
ILE 5140.0114
LEU 5150.0088
PHE 5160.0093
PHE 5170.0082
VAL 5180.0089
GLN 5190.0062
SER 5200.0062
LEU 5210.0067
PHE 5220.0059
MET 5230.0096
LEU 5240.0101
VAL 5250.0103
SER 5260.0141
VAL 5270.0142
VAL 5280.0094
LEU 5290.0062
TYR 5300.0103
PHE 5310.0223
SER 5320.0216
GLN 5330.0312
ARG 5340.0250
LYS 5350.0140
GLU 5360.0182
TYR 5370.0115
VAL 5380.0141
ALA 5390.0139
SER 5400.0133
MET 5410.0128
VAL 5420.0138
PHE 5430.0102
SER 5440.0087
LEU 5450.0083
ALA 5460.0089
MET 5470.0069
GLY 5480.0073
TRP 5490.0113
THR 5500.0148
ASN 5510.0150
MET 5520.0181
LEU 5530.0274
TYR 5540.0271
TYR 5550.0245
THR 5560.0271
ARG 5570.0250
GLY 5580.0236
PHE 5590.0212
GLN 5600.0164
GLN 5610.0220
MET 5620.0280
GLY 5630.0257
ILE 5640.0204
TYR 5650.0223
ALA 5660.0256
VAL 5670.0204
MET 5680.0090
ILE 5690.0082
GLU 5700.0098
LYS 5710.0088
MET 5720.0054
ILE 5730.0060
LEU 5740.0116
ARG 5750.0120
ASP 5760.0114
LEU 5770.0088
CYS 5780.0054
ARG 5790.0098
PHE 5800.0115
MET 5810.0103
PHE 5820.0165
VAL 5830.0130
TYR 5840.0091
LEU 5850.0105
VAL 5860.0076
PHE 5870.0049
LEU 5880.0052
PHE 5890.0077
GLY 5900.0073
PHE 5910.0048
SER 5920.0034
THR 5930.0047
ALA 5940.0047
VAL 5950.0015
VAL 5960.0022
THR 5970.0021
LEU 5980.0045
ILE 5990.0036
GLU 6000.0050
ASP 6010.0069
SER 6260.0049
TYR 6270.0044
ASN 6280.0054
SER 6290.0058
LEU 6300.0014
TYR 6310.0065
SER 6320.0036
THR 6330.0015
CYS 6340.0027
LEU 6350.0015
GLU 6360.0011
LEU 6370.0014
PHE 6380.0010
LYS 6390.0016
PHE 6400.0017
THR 6410.0028
ILE 6420.0049
GLY 6430.0057
MET 6440.0036
GLY 6450.0025
ASP 6460.0037
LEU 6470.0034
GLU 6480.0019
PHE 6490.0017
THR 6500.0024
GLU 6510.0047
ASN 6520.0039
TYR 6530.0054
ASP 6540.0099
PHE 6550.0100
LYS 6560.0044
ALA 6570.0011
VAL 6580.0050
PHE 6590.0037
ILE 6600.0044
ILE 6610.0068
LEU 6620.0052
LEU 6630.0044
LEU 6640.0053
ALA 6650.0037
TYR 6660.0021
VAL 6670.0017
ILE 6680.0019
LEU 6690.0020
THR 6700.0036
TYR 6710.0035
ILE 6720.0044
LEU 6730.0046
LEU 6740.0045
LEU 6750.0054
ASN 6760.0047
MET 6770.0024
LEU 6780.0026
ILE 6790.0053
ALA 6800.0104
LEU 6810.0120
MET 6820.0145
GLY 6830.0178
GLU 6840.0128
THR 6850.0134
VAL 6860.0218
ASN 6870.0226
LYS 6880.0125
ILE 6890.0107
ALA 6900.0085
GLN 6910.0071
GLU 6920.0088
SER 6930.0071
LYS 6940.0039
ASN 6950.0054
ILE 6960.0104
TRP 6970.0131
LYS 6980.0108
LEU 6990.0130
GLN 7000.0175
ARG 7010.0139
ALA 7020.0143
ILE 7030.0155
THR 7040.0131
ILE 7050.0128
LEU 7060.0156
ASP 7070.0209
THR 7080.0177
GLU 7090.0220
LYS 7100.0279
SER 7110.0249
PHE 7120.0277
LEU 7130.0298
LYS 7140.0386
CYS 7150.0279
MET 7160.0166
ARG 7170.0185
LYS 7180.0293
ALA 7190.0177
PHE 7200.0153
ARG 7210.0113
SER 7220.0040
GLY 7230.0037
LYS 7240.0098
LEU 7250.0117
LEU 7260.0156
TYR 7380.0112
ARG 7390.0112
TRP 7400.0080
CYS 7410.0095
PHE 7420.0087
ARG 7430.0124
VAL 7440.0160
ASP 7450.0177
GLU 7460.0145

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.