CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602251019571912004

---  normal mode 68  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1206
VAL 2830.0283
GLY 2840.0172
ASN 2850.0142
THR 2860.0096
VAL 2870.0088
LEU 2880.0075
HIS 2890.0087
ALA 2900.0067
LEU 2910.0048
VAL 2920.0048
GLU 2930.0043
VAL 2940.0037
ALA 2950.0032
ASP 2960.0072
ASN 2970.0062
THR 2980.0098
VAL 2990.0073
ASP 3000.0092
ASN 3010.0058
THR 3020.0041
LYS 3030.0037
PHE 3040.0031
VAL 3050.0024
THR 3060.0011
SER 3070.0020
MET 3080.0019
TYR 3090.0017
ASN 3100.0067
GLU 3110.0080
ILE 3120.0087
LEU 3130.0126
ILE 3140.0174
LEU 3150.0209
GLY 3160.0221
ALA 3170.0165
LYS 3180.0117
LEU 3190.0111
HIS 3200.0231
PRO 3210.0111
THR 3220.0204
LEU 3230.0220
LYS 3240.0223
LEU 3250.0130
GLU 3260.0144
GLU 3270.0174
ILE 3280.0156
THR 3290.0152
ASN 3300.0136
ARG 3310.0173
LYS 3320.0182
GLY 3330.0226
LEU 3340.0162
THR 3350.0134
PRO 3360.0092
LEU 3370.0035
ALA 3380.0031
LEU 3390.0031
ALA 3400.0028
ALA 3410.0031
SER 3420.0026
SER 3430.0034
GLY 3440.0057
LYS 3450.0072
ILE 3460.0093
GLY 3470.0085
VAL 3480.0075
LEU 3490.0087
ALA 3500.0095
TYR 3510.0080
ILE 3520.0094
LEU 3530.0112
GLN 3540.0099
ARG 3550.0159
GLU 3560.0182
ILE 3570.0179
HIS 3580.0356
GLU 3590.0297
PRO 3600.0293
GLU 3610.0228
CYS 3620.0225
ARG 3630.0272
HIS 3640.0207
LEU 3650.0185
SER 3660.0202
ARG 3670.0142
LYS 3680.0141
PHE 3690.0143
THR 3700.0142
GLU 3710.0122
TRP 3720.0076
ALA 3730.0029
TYR 3740.0055
GLY 3750.0128
PRO 3760.0104
VAL 3770.0079
HIS 3780.0079
SER 3790.0091
SER 3800.0104
LEU 3810.0117
TYR 3820.0071
ASP 3830.0045
LEU 3840.0034
SER 3850.0058
CYS 3860.0048
ILE 3870.0039
ASP 3880.0044
THR 3890.0069
CYS 3900.0100
GLU 3910.0216
LYS 3920.0227
ASN 3930.0135
SER 3940.0054
VAL 3950.0040
LEU 3960.0056
GLU 3970.0054
VAL 3980.0042
ILE 3990.0046
ALA 4000.0111
TYR 4010.0122
SER 4020.0079
SER 4030.0154
SER 4040.0213
GLU 4050.0252
THR 4060.0085
PRO 4070.0090
ASN 4080.0056
ARG 4090.0050
HIS 4100.0053
ASP 4110.0085
MET 4120.0076
LEU 4130.0094
LEU 4140.0109
VAL 4150.0102
GLU 4160.0100
PRO 4170.0101
LEU 4180.0080
ASN 4190.0072
ARG 4200.0077
LEU 4210.0068
LEU 4220.0093
GLN 4230.0128
ASP 4240.0154
LYS 4250.0113
TRP 4260.0134
ASP 4270.0208
ARG 4280.0195
PHE 4290.0158
VAL 4300.0117
LYS 4310.0172
ARG 4320.0157
ILE 4330.0105
PHE 4340.0113
TYR 4350.0133
PHE 4360.0107
ASN 4370.0097
PHE 4380.0135
PHE 4390.0194
VAL 4400.0138
TYR 4410.0091
CYS 4420.0191
LEU 4430.0204
TYR 4440.0136
MET 4450.0113
ILE 4460.0182
ILE 4470.0177
PHE 4480.0115
THR 4490.0106
ALA 4500.0114
ALA 4510.0058
ALA 4520.0066
TYR 4530.0162
TYR 4540.0135
ARG 4550.0095
PRO 4560.0128
VAL 4570.0203
GLU 4580.0190
GLY 4590.0218
LEU 4600.0209
PRO 4610.0150
PRO 4620.0136
TYR 4630.0099
LYS 4640.0219
LEU 4650.0180
LYS 4660.0213
ASN 4670.0147
THR 4680.0180
VAL 4690.0277
GLY 4700.0332
ASP 4710.0198
TYR 4720.0117
PHE 4730.0175
ARG 4740.0161
VAL 4750.0124
THR 4760.0119
GLY 4770.0144
GLU 4780.0098
ILE 4790.0158
LEU 4800.0177
SER 4810.0094
VAL 4820.0108
SER 4830.0073
GLY 4840.0070
GLY 4850.0066
VAL 4860.0132
TYR 4870.0203
PHE 4880.0171
PHE 4890.0160
PHE 4900.0240
ARG 4910.0245
GLY 4920.0165
ILE 4930.0206
GLN 4940.0178
TYR 4950.0075
PHE 4960.0109
LEU 4970.0353
GLN 4980.0349
ARG 4990.0394
ARG 5000.0383
PRO 5010.0322
SER 5020.1206
LEU 5030.0663
LYS 5040.0462
SER 5050.0275
LEU 5060.0267
PHE 5070.0123
VAL 5080.0137
ASP 5090.0161
SER 5100.0167
TYR 5110.0111
SER 5120.0121
GLU 5130.0111
ILE 5140.0115
LEU 5150.0107
PHE 5160.0104
PHE 5170.0111
VAL 5180.0084
GLN 5190.0064
SER 5200.0079
LEU 5210.0090
PHE 5220.0054
MET 5230.0047
LEU 5240.0072
VAL 5250.0080
SER 5260.0056
VAL 5270.0049
VAL 5280.0080
LEU 5290.0074
TYR 5300.0057
PHE 5310.0111
SER 5320.0188
GLN 5330.0203
ARG 5340.0140
LYS 5350.0068
GLU 5360.0057
TYR 5370.0053
VAL 5380.0047
ALA 5390.0084
SER 5400.0078
MET 5410.0054
VAL 5420.0047
PHE 5430.0040
SER 5440.0019
LEU 5450.0038
ALA 5460.0054
MET 5470.0070
GLY 5480.0046
TRP 5490.0105
THR 5500.0132
ASN 5510.0109
MET 5520.0121
LEU 5530.0110
TYR 5540.0106
TYR 5550.0091
THR 5560.0041
ARG 5570.0047
GLY 5580.0077
PHE 5590.0093
GLN 5600.0155
GLN 5610.0209
MET 5620.0137
GLY 5630.0081
ILE 5640.0101
TYR 5650.0114
ALA 5660.0062
VAL 5670.0059
MET 5680.0070
ILE 5690.0057
GLU 5700.0088
LYS 5710.0078
MET 5720.0081
ILE 5730.0108
LEU 5740.0110
ARG 5750.0108
ASP 5760.0119
LEU 5770.0145
CYS 5780.0148
ARG 5790.0109
PHE 5800.0031
MET 5810.0070
PHE 5820.0050
VAL 5830.0028
TYR 5840.0044
LEU 5850.0049
VAL 5860.0043
PHE 5870.0042
LEU 5880.0044
PHE 5890.0034
GLY 5900.0043
PHE 5910.0033
SER 5920.0023
THR 5930.0031
ALA 5940.0035
VAL 5950.0036
VAL 5960.0040
THR 5970.0043
LEU 5980.0043
ILE 5990.0036
GLU 6000.0040
ASP 6010.0066
SER 6260.0090
TYR 6270.0066
ASN 6280.0068
SER 6290.0061
LEU 6300.0058
TYR 6310.0064
SER 6320.0036
THR 6330.0031
CYS 6340.0037
LEU 6350.0021
GLU 6360.0012
LEU 6370.0012
PHE 6380.0054
LYS 6390.0062
PHE 6400.0048
THR 6410.0077
ILE 6420.0111
GLY 6430.0097
MET 6440.0090
GLY 6450.0053
ASP 6460.0073
LEU 6470.0048
GLU 6480.0032
PHE 6490.0034
THR 6500.0053
GLU 6510.0061
ASN 6520.0050
TYR 6530.0056
ASP 6540.0085
PHE 6550.0092
LYS 6560.0066
ALA 6570.0038
VAL 6580.0031
PHE 6590.0031
ILE 6600.0057
ILE 6610.0065
LEU 6620.0043
LEU 6630.0039
LEU 6640.0048
ALA 6650.0042
TYR 6660.0028
VAL 6670.0028
ILE 6680.0036
LEU 6690.0048
THR 6700.0063
TYR 6710.0074
ILE 6720.0066
LEU 6730.0070
LEU 6740.0093
LEU 6750.0074
ASN 6760.0076
MET 6770.0132
LEU 6780.0093
ILE 6790.0091
ALA 6800.0157
LEU 6810.0150
MET 6820.0136
GLY 6830.0220
GLU 6840.0204
THR 6850.0138
VAL 6860.0149
ASN 6870.0180
LYS 6880.0134
ILE 6890.0169
ALA 6900.0161
GLN 6910.0144
GLU 6920.0073
SER 6930.0059
LYS 6940.0106
ASN 6950.0073
ILE 6960.0063
TRP 6970.0093
LYS 6980.0134
LEU 6990.0137
GLN 7000.0126
ARG 7010.0157
ALA 7020.0158
ILE 7030.0157
THR 7040.0119
ILE 7050.0101
LEU 7060.0103
ASP 7070.0073
THR 7080.0071
GLU 7090.0102
LYS 7100.0155
SER 7110.0163
PHE 7120.0177
LEU 7130.0067
LYS 7140.0154
CYS 7150.0356
MET 7160.0170
ARG 7170.0283
LYS 7180.0261
ALA 7190.0185
PHE 7200.0148
ARG 7210.0133
SER 7220.0044
GLY 7230.0028
LYS 7240.0034
LEU 7250.0078
LEU 7260.0245
TYR 7380.0021
ARG 7390.0014
TRP 7400.0020
CYS 7410.0038
PHE 7420.0028
ARG 7430.0054
VAL 7440.0104
ASP 7450.0095
GLU 7460.0094

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.