CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602251019571912004

---  normal mode 82  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0682
VAL 2830.0037
GLY 2840.0032
ASN 2850.0016
THR 2860.0016
VAL 2870.0014
LEU 2880.0015
HIS 2890.0015
ALA 2900.0012
LEU 2910.0010
VAL 2920.0006
GLU 2930.0009
VAL 2940.0003
ALA 2950.0010
ASP 2960.0016
ASN 2970.0022
THR 2980.0039
VAL 2990.0035
ASP 3000.0016
ASN 3010.0008
THR 3020.0018
LYS 3030.0025
PHE 3040.0013
VAL 3050.0007
THR 3060.0007
SER 3070.0007
MET 3080.0006
TYR 3090.0006
ASN 3100.0008
GLU 3110.0012
ILE 3120.0011
LEU 3130.0012
ILE 3140.0009
LEU 3150.0010
GLY 3160.0015
ALA 3170.0019
LYS 3180.0016
LEU 3190.0009
HIS 3200.0004
PRO 3210.0005
THR 3220.0016
LEU 3230.0014
LYS 3240.0010
LEU 3250.0010
GLU 3260.0009
GLU 3270.0014
ILE 3280.0025
THR 3290.0024
ASN 3300.0019
ARG 3310.0021
LYS 3320.0033
GLY 3330.0047
LEU 3340.0024
THR 3350.0021
PRO 3360.0015
LEU 3370.0008
ALA 3380.0011
LEU 3390.0013
ALA 3400.0011
ALA 3410.0015
SER 3420.0017
SER 3430.0014
GLY 3440.0017
LYS 3450.0015
ILE 3460.0010
GLY 3470.0007
VAL 3480.0001
LEU 3490.0007
ALA 3500.0012
TYR 3510.0015
ILE 3520.0020
LEU 3530.0019
GLN 3540.0018
ARG 3550.0020
GLU 3560.0017
ILE 3570.0019
HIS 3580.0027
GLU 3590.0037
PRO 3600.0038
GLU 3610.0036
CYS 3620.0032
ARG 3630.0032
HIS 3640.0035
LEU 3650.0029
SER 3660.0026
ARG 3670.0019
LYS 3680.0011
PHE 3690.0010
THR 3700.0033
GLU 3710.0039
TRP 3720.0030
ALA 3730.0012
TYR 3740.0031
GLY 3750.0053
PRO 3760.0078
VAL 3770.0038
HIS 3780.0035
SER 3790.0047
SER 3800.0035
LEU 3810.0028
TYR 3820.0006
ASP 3830.0017
LEU 3840.0025
SER 3850.0020
CYS 3860.0018
ILE 3870.0020
ASP 3880.0027
THR 3890.0024
CYS 3900.0025
GLU 3910.0054
LYS 3920.0034
ASN 3930.0031
SER 3940.0014
VAL 3950.0015
LEU 3960.0011
GLU 3970.0021
VAL 3980.0019
ILE 3990.0017
ALA 4000.0028
TYR 4010.0035
SER 4020.0052
SER 4030.0049
SER 4040.0110
GLU 4050.0156
THR 4060.0033
PRO 4070.0036
ASN 4080.0037
ARG 4090.0043
HIS 4100.0036
ASP 4110.0018
MET 4120.0019
LEU 4130.0021
LEU 4140.0011
VAL 4150.0034
GLU 4160.0031
PRO 4170.0024
LEU 4180.0022
ASN 4190.0027
ARG 4200.0024
LEU 4210.0016
LEU 4220.0015
GLN 4230.0016
ASP 4240.0015
LYS 4250.0006
TRP 4260.0007
ASP 4270.0016
ARG 4280.0014
PHE 4290.0013
VAL 4300.0014
LYS 4310.0026
ARG 4320.0037
ILE 4330.0023
PHE 4340.0014
TYR 4350.0006
PHE 4360.0029
ASN 4370.0022
PHE 4380.0027
PHE 4390.0064
VAL 4400.0072
TYR 4410.0061
CYS 4420.0067
LEU 4430.0074
TYR 4440.0094
MET 4450.0108
ILE 4460.0109
ILE 4470.0132
PHE 4480.0219
THR 4490.0261
ALA 4500.0321
ALA 4510.0394
ALA 4520.0421
TYR 4530.0532
TYR 4540.0380
ARG 4550.0337
PRO 4560.0281
VAL 4570.0274
GLU 4580.0293
GLY 4590.0370
LEU 4600.0300
PRO 4610.0368
PRO 4620.0459
TYR 4630.0157
LYS 4640.0132
LEU 4650.0232
LYS 4660.0231
ASN 4670.0166
THR 4680.0150
VAL 4690.0239
GLY 4700.0247
ASP 4710.0276
TYR 4720.0304
PHE 4730.0337
ARG 4740.0327
VAL 4750.0565
THR 4760.0598
GLY 4770.0436
GLU 4780.0481
ILE 4790.0629
LEU 4800.0465
SER 4810.0296
VAL 4820.0281
SER 4830.0256
GLY 4840.0142
GLY 4850.0104
VAL 4860.0065
TYR 4870.0099
PHE 4880.0070
PHE 4890.0064
PHE 4900.0091
ARG 4910.0074
GLY 4920.0062
ILE 4930.0097
GLN 4940.0103
TYR 4950.0083
PHE 4960.0050
LEU 4970.0046
GLN 4980.0089
ARG 4990.0098
ARG 5000.0082
PRO 5010.0094
SER 5020.0088
LEU 5030.0059
LYS 5040.0052
SER 5050.0049
LEU 5060.0054
PHE 5070.0049
VAL 5080.0047
ASP 5090.0050
SER 5100.0052
TYR 5110.0025
SER 5120.0034
GLU 5130.0044
ILE 5140.0057
LEU 5150.0050
PHE 5160.0053
PHE 5170.0080
VAL 5180.0070
GLN 5190.0054
SER 5200.0070
LEU 5210.0062
PHE 5220.0062
MET 5230.0135
LEU 5240.0158
VAL 5250.0210
SER 5260.0421
VAL 5270.0531
VAL 5280.0346
LEU 5290.0233
TYR 5300.0473
PHE 5310.0478
SER 5320.0273
GLN 5330.0042
ARG 5340.0335
LYS 5350.0557
GLU 5360.0610
TYR 5370.0601
VAL 5380.0682
ALA 5390.0545
SER 5400.0351
MET 5410.0302
VAL 5420.0234
PHE 5430.0129
SER 5440.0079
LEU 5450.0105
ALA 5460.0069
MET 5470.0063
GLY 5480.0089
TRP 5490.0131
THR 5500.0094
ASN 5510.0053
MET 5520.0070
LEU 5530.0055
TYR 5540.0051
TYR 5550.0051
THR 5560.0054
ARG 5570.0052
GLY 5580.0037
PHE 5590.0024
GLN 5600.0055
GLN 5610.0121
MET 5620.0081
GLY 5630.0064
ILE 5640.0078
TYR 5650.0110
ALA 5660.0101
VAL 5670.0061
MET 5680.0056
ILE 5690.0063
GLU 5700.0060
LYS 5710.0069
MET 5720.0072
ILE 5730.0048
LEU 5740.0064
ARG 5750.0097
ASP 5760.0113
LEU 5770.0125
CYS 5780.0170
ARG 5790.0178
PHE 5800.0142
MET 5810.0153
PHE 5820.0197
VAL 5830.0155
TYR 5840.0126
LEU 5850.0154
VAL 5860.0142
PHE 5870.0116
LEU 5880.0090
PHE 5890.0071
GLY 5900.0072
PHE 5910.0063
SER 5920.0071
THR 5930.0082
ALA 5940.0104
VAL 5950.0103
VAL 5960.0110
THR 5970.0125
LEU 5980.0067
ILE 5990.0061
GLU 6000.0136
ASP 6010.0169
SER 6260.0106
TYR 6270.0128
ASN 6280.0119
SER 6290.0121
LEU 6300.0099
TYR 6310.0139
SER 6320.0131
THR 6330.0100
CYS 6340.0057
LEU 6350.0101
GLU 6360.0097
LEU 6370.0038
PHE 6380.0077
LYS 6390.0050
PHE 6400.0074
THR 6410.0168
ILE 6420.0250
GLY 6430.0262
MET 6440.0085
GLY 6450.0077
ASP 6460.0151
LEU 6470.0107
GLU 6480.0108
PHE 6490.0110
THR 6500.0096
GLU 6510.0076
ASN 6520.0025
TYR 6530.0091
ASP 6540.0142
PHE 6550.0199
LYS 6560.0231
ALA 6570.0280
VAL 6580.0211
PHE 6590.0123
ILE 6600.0144
ILE 6610.0175
LEU 6620.0094
LEU 6630.0073
LEU 6640.0059
ALA 6650.0058
TYR 6660.0038
VAL 6670.0040
ILE 6680.0085
LEU 6690.0068
THR 6700.0082
TYR 6710.0132
ILE 6720.0113
LEU 6730.0088
LEU 6740.0084
LEU 6750.0048
ASN 6760.0072
MET 6770.0116
LEU 6780.0027
ILE 6790.0128
ALA 6800.0114
LEU 6810.0083
MET 6820.0105
GLY 6830.0086
GLU 6840.0087
THR 6850.0106
VAL 6860.0115
ASN 6870.0092
LYS 6880.0148
ILE 6890.0128
ALA 6900.0092
GLN 6910.0137
GLU 6920.0105
SER 6930.0081
LYS 6940.0064
ASN 6950.0032
ILE 6960.0051
TRP 6970.0031
LYS 6980.0017
LEU 6990.0040
GLN 7000.0040
ARG 7010.0017
ALA 7020.0021
ILE 7030.0021
THR 7040.0010
ILE 7050.0010
LEU 7060.0006
ASP 7070.0026
THR 7080.0015
GLU 7090.0030
LYS 7100.0057
SER 7110.0041
PHE 7120.0050
LEU 7130.0062
LYS 7140.0083
CYS 7150.0116
MET 7160.0096
ARG 7170.0095
LYS 7180.0125
ALA 7190.0052
PHE 7200.0052
ARG 7210.0051
SER 7220.0038
GLY 7230.0024
LYS 7240.0036
LEU 7250.0033
LEU 7260.0029
TYR 7380.0031
ARG 7390.0022
TRP 7400.0027
CYS 7410.0020
PHE 7420.0012
ARG 7430.0030
VAL 7440.0051
ASP 7450.0060
GLU 7460.0065

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.