CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602251019571912004

---  normal mode 85  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0918
VAL 2830.0191
GLY 2840.0118
ASN 2850.0040
THR 2860.0098
VAL 2870.0117
LEU 2880.0082
HIS 2890.0021
ALA 2900.0055
LEU 2910.0054
VAL 2920.0084
GLU 2930.0093
VAL 2940.0098
ALA 2950.0199
ASP 2960.0197
ASN 2970.0177
THR 2980.0168
VAL 2990.0109
ASP 3000.0322
ASN 3010.0274
THR 3020.0212
LYS 3030.0181
PHE 3040.0168
VAL 3050.0188
THR 3060.0171
SER 3070.0126
MET 3080.0094
TYR 3090.0096
ASN 3100.0141
GLU 3110.0107
ILE 3120.0156
LEU 3130.0184
ILE 3140.0241
LEU 3150.0205
GLY 3160.0220
ALA 3170.0131
LYS 3180.0169
LEU 3190.0248
HIS 3200.0120
PRO 3210.0175
THR 3220.0256
LEU 3230.0246
LYS 3240.0306
LEU 3250.0209
GLU 3260.0223
GLU 3270.0223
ILE 3280.0147
THR 3290.0082
ASN 3300.0035
ARG 3310.0113
LYS 3320.0069
GLY 3330.0133
LEU 3340.0038
THR 3350.0027
PRO 3360.0051
LEU 3370.0057
ALA 3380.0053
LEU 3390.0059
ALA 3400.0096
ALA 3410.0112
SER 3420.0095
SER 3430.0104
GLY 3440.0123
LYS 3450.0145
ILE 3460.0141
GLY 3470.0137
VAL 3480.0141
LEU 3490.0111
ALA 3500.0108
TYR 3510.0104
ILE 3520.0131
LEU 3530.0133
GLN 3540.0148
ARG 3550.0143
GLU 3560.0160
ILE 3570.0219
HIS 3580.0112
GLU 3590.0099
PRO 3600.0149
GLU 3610.0094
CYS 3620.0158
ARG 3630.0186
HIS 3640.0207
LEU 3650.0241
SER 3660.0209
ARG 3670.0124
LYS 3680.0087
PHE 3690.0076
THR 3700.0050
GLU 3710.0154
TRP 3720.0142
ALA 3730.0081
TYR 3740.0153
GLY 3750.0183
PRO 3760.0347
VAL 3770.0167
HIS 3780.0126
SER 3790.0179
SER 3800.0120
LEU 3810.0078
TYR 3820.0094
ASP 3830.0107
LEU 3840.0129
SER 3850.0118
CYS 3860.0108
ILE 3870.0113
ASP 3880.0087
THR 3890.0107
CYS 3900.0123
GLU 3910.0240
LYS 3920.0077
ASN 3930.0113
SER 3940.0073
VAL 3950.0071
LEU 3960.0078
GLU 3970.0088
VAL 3980.0084
ILE 3990.0105
ALA 4000.0131
TYR 4010.0127
SER 4020.0157
SER 4030.0238
SER 4040.0105
GLU 4050.0170
THR 4060.0115
PRO 4070.0087
ASN 4080.0100
ARG 4090.0089
HIS 4100.0088
ASP 4110.0086
MET 4120.0067
LEU 4130.0064
LEU 4140.0062
VAL 4150.0148
GLU 4160.0162
PRO 4170.0141
LEU 4180.0094
ASN 4190.0098
ARG 4200.0104
LEU 4210.0066
LEU 4220.0039
GLN 4230.0079
ASP 4240.0067
LYS 4250.0048
TRP 4260.0062
ASP 4270.0093
ARG 4280.0100
PHE 4290.0085
VAL 4300.0077
LYS 4310.0098
ARG 4320.0113
ILE 4330.0119
PHE 4340.0096
TYR 4350.0088
PHE 4360.0150
ASN 4370.0146
PHE 4380.0143
PHE 4390.0152
VAL 4400.0110
TYR 4410.0105
CYS 4420.0091
LEU 4430.0044
TYR 4440.0050
MET 4450.0072
ILE 4460.0120
ILE 4470.0128
PHE 4480.0130
THR 4490.0144
ALA 4500.0150
ALA 4510.0194
ALA 4520.0125
TYR 4530.0235
TYR 4540.0234
ARG 4550.0187
PRO 4560.0185
VAL 4570.0056
GLU 4580.0101
GLY 4590.0135
LEU 4600.0121
PRO 4610.0093
PRO 4620.0082
TYR 4630.0148
LYS 4640.0181
LEU 4650.0115
LYS 4660.0117
ASN 4670.0095
THR 4680.0095
VAL 4690.0043
GLY 4700.0063
ASP 4710.0078
TYR 4720.0042
PHE 4730.0059
ARG 4740.0078
VAL 4750.0049
THR 4760.0081
GLY 4770.0075
GLU 4780.0038
ILE 4790.0138
LEU 4800.0156
SER 4810.0075
VAL 4820.0069
SER 4830.0099
GLY 4840.0075
GLY 4850.0076
VAL 4860.0067
TYR 4870.0077
PHE 4880.0098
PHE 4890.0068
PHE 4900.0011
ARG 4910.0078
GLY 4920.0101
ILE 4930.0128
GLN 4940.0098
TYR 4950.0048
PHE 4960.0187
LEU 4970.0300
GLN 4980.0237
ARG 4990.0136
ARG 5000.0367
PRO 5010.0472
SER 5020.0918
LEU 5030.0368
LYS 5040.0379
SER 5050.0359
LEU 5060.0377
PHE 5070.0384
VAL 5080.0222
ASP 5090.0226
SER 5100.0250
TYR 5110.0172
SER 5120.0151
GLU 5130.0136
ILE 5140.0165
LEU 5150.0168
PHE 5160.0121
PHE 5170.0114
VAL 5180.0126
GLN 5190.0099
SER 5200.0078
LEU 5210.0137
PHE 5220.0136
MET 5230.0061
LEU 5240.0041
VAL 5250.0062
SER 5260.0074
VAL 5270.0052
VAL 5280.0045
LEU 5290.0057
TYR 5300.0052
PHE 5310.0056
SER 5320.0114
GLN 5330.0137
ARG 5340.0150
LYS 5350.0034
GLU 5360.0076
TYR 5370.0086
VAL 5380.0188
ALA 5390.0214
SER 5400.0176
MET 5410.0186
VAL 5420.0277
PHE 5430.0264
SER 5440.0141
LEU 5450.0151
ALA 5460.0197
MET 5470.0148
GLY 5480.0085
TRP 5490.0108
THR 5500.0155
ASN 5510.0147
MET 5520.0143
LEU 5530.0132
TYR 5540.0138
TYR 5550.0126
THR 5560.0116
ARG 5570.0090
GLY 5580.0085
PHE 5590.0097
GLN 5600.0172
GLN 5610.0355
MET 5620.0224
GLY 5630.0184
ILE 5640.0176
TYR 5650.0172
ALA 5660.0157
VAL 5670.0085
MET 5680.0059
ILE 5690.0081
GLU 5700.0082
LYS 5710.0096
MET 5720.0146
ILE 5730.0133
LEU 5740.0084
ARG 5750.0107
ASP 5760.0201
LEU 5770.0218
CYS 5780.0135
ARG 5790.0185
PHE 5800.0163
MET 5810.0186
PHE 5820.0199
VAL 5830.0147
TYR 5840.0137
LEU 5850.0168
VAL 5860.0149
PHE 5870.0115
LEU 5880.0106
PHE 5890.0091
GLY 5900.0098
PHE 5910.0081
SER 5920.0058
THR 5930.0104
ALA 5940.0112
VAL 5950.0069
VAL 5960.0062
THR 5970.0102
LEU 5980.0048
ILE 5990.0051
GLU 6000.0062
ASP 6010.0149
SER 6260.0034
TYR 6270.0051
ASN 6280.0057
SER 6290.0131
LEU 6300.0147
TYR 6310.0157
SER 6320.0074
THR 6330.0034
CYS 6340.0031
LEU 6350.0048
GLU 6360.0020
LEU 6370.0027
PHE 6380.0034
LYS 6390.0031
PHE 6400.0035
THR 6410.0039
ILE 6420.0040
GLY 6430.0031
MET 6440.0025
GLY 6450.0024
ASP 6460.0029
LEU 6470.0047
GLU 6480.0046
PHE 6490.0064
THR 6500.0120
GLU 6510.0107
ASN 6520.0099
TYR 6530.0079
ASP 6540.0101
PHE 6550.0128
LYS 6560.0147
ALA 6570.0128
VAL 6580.0058
PHE 6590.0063
ILE 6600.0088
ILE 6610.0075
LEU 6620.0054
LEU 6630.0059
LEU 6640.0068
ALA 6650.0071
TYR 6660.0056
VAL 6670.0051
ILE 6680.0049
LEU 6690.0055
THR 6700.0049
TYR 6710.0066
ILE 6720.0091
LEU 6730.0105
LEU 6740.0082
LEU 6750.0074
ASN 6760.0157
MET 6770.0258
LEU 6780.0127
ILE 6790.0099
ALA 6800.0172
LEU 6810.0244
MET 6820.0204
GLY 6830.0168
GLU 6840.0266
THR 6850.0317
VAL 6860.0208
ASN 6870.0163
LYS 6880.0150
ILE 6890.0037
ALA 6900.0084
GLN 6910.0105
GLU 6920.0108
SER 6930.0123
LYS 6940.0111
ASN 6950.0123
ILE 6960.0130
TRP 6970.0131
LYS 6980.0101
LEU 6990.0101
GLN 7000.0103
ARG 7010.0100
ALA 7020.0085
ILE 7030.0089
THR 7040.0070
ILE 7050.0072
LEU 7060.0070
ASP 7070.0089
THR 7080.0081
GLU 7090.0081
LYS 7100.0112
SER 7110.0094
PHE 7120.0095
LEU 7130.0109
LYS 7140.0076
CYS 7150.0066
MET 7160.0072
ARG 7170.0095
LYS 7180.0106
ALA 7190.0030
PHE 7200.0026
ARG 7210.0054
SER 7220.0110
GLY 7230.0070
LYS 7240.0117
LEU 7250.0071
LEU 7260.0072
TYR 7380.0136
ARG 7390.0133
TRP 7400.0114
CYS 7410.0030
PHE 7420.0086
ARG 7430.0135
VAL 7440.0223
ASP 7450.0243
GLU 7460.0277

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.