CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602251019571912004

---  normal mode 90  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0585
VAL 2830.0461
GLY 2840.0248
ASN 2850.0115
THR 2860.0151
VAL 2870.0162
LEU 2880.0137
HIS 2890.0111
ALA 2900.0144
LEU 2910.0181
VAL 2920.0175
GLU 2930.0172
VAL 2940.0181
ALA 2950.0183
ASP 2960.0206
ASN 2970.0210
THR 2980.0390
VAL 2990.0111
ASP 3000.0224
ASN 3010.0112
THR 3020.0139
LYS 3030.0200
PHE 3040.0078
VAL 3050.0103
THR 3060.0161
SER 3070.0130
MET 3080.0111
TYR 3090.0136
ASN 3100.0158
GLU 3110.0138
ILE 3120.0118
LEU 3130.0126
ILE 3140.0139
LEU 3150.0116
GLY 3160.0131
ALA 3170.0108
LYS 3180.0090
LEU 3190.0116
HIS 3200.0101
PRO 3210.0115
THR 3220.0179
LEU 3230.0110
LYS 3240.0053
LEU 3250.0041
GLU 3260.0050
GLU 3270.0104
ILE 3280.0172
THR 3290.0142
ASN 3300.0073
ARG 3310.0326
LYS 3320.0318
GLY 3330.0510
LEU 3340.0149
THR 3350.0062
PRO 3360.0076
LEU 3370.0074
ALA 3380.0062
LEU 3390.0083
ALA 3400.0058
ALA 3410.0043
SER 3420.0038
SER 3430.0078
GLY 3440.0084
LYS 3450.0113
ILE 3460.0102
GLY 3470.0066
VAL 3480.0094
LEU 3490.0075
ALA 3500.0063
TYR 3510.0088
ILE 3520.0088
LEU 3530.0061
GLN 3540.0088
ARG 3550.0067
GLU 3560.0038
ILE 3570.0042
HIS 3580.0081
GLU 3590.0122
PRO 3600.0136
GLU 3610.0130
CYS 3620.0104
ARG 3630.0122
HIS 3640.0151
LEU 3650.0134
SER 3660.0103
ARG 3670.0073
LYS 3680.0054
PHE 3690.0042
THR 3700.0020
GLU 3710.0051
TRP 3720.0066
ALA 3730.0087
TYR 3740.0052
GLY 3750.0062
PRO 3760.0087
VAL 3770.0059
HIS 3780.0048
SER 3790.0055
SER 3800.0044
LEU 3810.0042
TYR 3820.0060
ASP 3830.0063
LEU 3840.0073
SER 3850.0042
CYS 3860.0055
ILE 3870.0079
ASP 3880.0158
THR 3890.0158
CYS 3900.0147
GLU 3910.0314
LYS 3920.0179
ASN 3930.0035
SER 3940.0086
VAL 3950.0060
LEU 3960.0082
GLU 3970.0099
VAL 3980.0069
ILE 3990.0060
ALA 4000.0087
TYR 4010.0080
SER 4020.0101
SER 4030.0194
SER 4040.0147
GLU 4050.0195
THR 4060.0159
PRO 4070.0156
ASN 4080.0162
ARG 4090.0099
HIS 4100.0074
ASP 4110.0084
MET 4120.0067
LEU 4130.0064
LEU 4140.0064
VAL 4150.0063
GLU 4160.0077
PRO 4170.0047
LEU 4180.0045
ASN 4190.0071
ARG 4200.0075
LEU 4210.0081
LEU 4220.0082
GLN 4230.0115
ASP 4240.0143
LYS 4250.0130
TRP 4260.0115
ASP 4270.0188
ARG 4280.0211
PHE 4290.0194
VAL 4300.0215
LYS 4310.0226
ARG 4320.0319
ILE 4330.0190
PHE 4340.0113
TYR 4350.0161
PHE 4360.0136
ASN 4370.0121
PHE 4380.0188
PHE 4390.0303
VAL 4400.0281
TYR 4410.0201
CYS 4420.0151
LEU 4430.0176
TYR 4440.0162
MET 4450.0132
ILE 4460.0111
ILE 4470.0163
PHE 4480.0183
THR 4490.0145
ALA 4500.0185
ALA 4510.0270
ALA 4520.0170
TYR 4530.0178
TYR 4540.0265
ARG 4550.0185
PRO 4560.0070
VAL 4570.0144
GLU 4580.0116
GLY 4590.0088
LEU 4600.0112
PRO 4610.0114
PRO 4620.0175
TYR 4630.0273
LYS 4640.0329
LEU 4650.0198
LYS 4660.0337
ASN 4670.0399
THR 4680.0413
VAL 4690.0152
GLY 4700.0268
ASP 4710.0210
TYR 4720.0131
PHE 4730.0282
ARG 4740.0222
VAL 4750.0094
THR 4760.0137
GLY 4770.0148
GLU 4780.0120
ILE 4790.0092
LEU 4800.0113
SER 4810.0067
VAL 4820.0116
SER 4830.0171
GLY 4840.0114
GLY 4850.0102
VAL 4860.0170
TYR 4870.0128
PHE 4880.0028
PHE 4890.0113
PHE 4900.0073
ARG 4910.0037
GLY 4920.0098
ILE 4930.0090
GLN 4940.0109
TYR 4950.0108
PHE 4960.0120
LEU 4970.0162
GLN 4980.0159
ARG 4990.0033
ARG 5000.0054
PRO 5010.0108
SER 5020.0103
LEU 5030.0231
LYS 5040.0191
SER 5050.0237
LEU 5060.0221
PHE 5070.0252
VAL 5080.0186
ASP 5090.0128
SER 5100.0068
TYR 5110.0014
SER 5120.0071
GLU 5130.0101
ILE 5140.0075
LEU 5150.0112
PHE 5160.0115
PHE 5170.0106
VAL 5180.0143
GLN 5190.0121
SER 5200.0099
LEU 5210.0180
PHE 5220.0155
MET 5230.0121
LEU 5240.0154
VAL 5250.0125
SER 5260.0068
VAL 5270.0027
VAL 5280.0035
LEU 5290.0078
TYR 5300.0084
PHE 5310.0085
SER 5320.0165
GLN 5330.0088
ARG 5340.0108
LYS 5350.0129
GLU 5360.0116
TYR 5370.0069
VAL 5380.0084
ALA 5390.0059
SER 5400.0095
MET 5410.0112
VAL 5420.0078
PHE 5430.0119
SER 5440.0133
LEU 5450.0117
ALA 5460.0131
MET 5470.0143
GLY 5480.0139
TRP 5490.0128
THR 5500.0139
ASN 5510.0135
MET 5520.0147
LEU 5530.0114
TYR 5540.0107
TYR 5550.0134
THR 5560.0093
ARG 5570.0083
GLY 5580.0085
PHE 5590.0099
GLN 5600.0105
GLN 5610.0163
MET 5620.0088
GLY 5630.0066
ILE 5640.0135
TYR 5650.0163
ALA 5660.0072
VAL 5670.0039
MET 5680.0089
ILE 5690.0089
GLU 5700.0057
LYS 5710.0041
MET 5720.0041
ILE 5730.0041
LEU 5740.0081
ARG 5750.0053
ASP 5760.0031
LEU 5770.0100
CYS 5780.0090
ARG 5790.0076
PHE 5800.0047
MET 5810.0059
PHE 5820.0071
VAL 5830.0038
TYR 5840.0035
LEU 5850.0043
VAL 5860.0074
PHE 5870.0085
LEU 5880.0088
PHE 5890.0079
GLY 5900.0096
PHE 5910.0091
SER 5920.0057
THR 5930.0073
ALA 5940.0070
VAL 5950.0023
VAL 5960.0074
THR 5970.0105
LEU 5980.0097
ILE 5990.0066
GLU 6000.0087
ASP 6010.0214
SER 6260.0127
TYR 6270.0132
ASN 6280.0149
SER 6290.0215
LEU 6300.0138
TYR 6310.0150
SER 6320.0106
THR 6330.0023
CYS 6340.0026
LEU 6350.0061
GLU 6360.0084
LEU 6370.0096
PHE 6380.0116
LYS 6390.0112
PHE 6400.0089
THR 6410.0102
ILE 6420.0150
GLY 6430.0158
MET 6440.0179
GLY 6450.0074
ASP 6460.0048
LEU 6470.0039
GLU 6480.0052
PHE 6490.0043
THR 6500.0086
GLU 6510.0098
ASN 6520.0069
TYR 6530.0086
ASP 6540.0089
PHE 6550.0093
LYS 6560.0152
ALA 6570.0260
VAL 6580.0226
PHE 6590.0097
ILE 6600.0096
ILE 6610.0113
LEU 6620.0050
LEU 6630.0039
LEU 6640.0060
ALA 6650.0127
TYR 6660.0116
VAL 6670.0116
ILE 6680.0126
LEU 6690.0099
THR 6700.0052
TYR 6710.0083
ILE 6720.0073
LEU 6730.0065
LEU 6740.0094
LEU 6750.0109
ASN 6760.0193
MET 6770.0246
LEU 6780.0102
ILE 6790.0125
ALA 6800.0110
LEU 6810.0108
MET 6820.0134
GLY 6830.0314
GLU 6840.0291
THR 6850.0133
VAL 6860.0043
ASN 6870.0069
LYS 6880.0208
ILE 6890.0142
ALA 6900.0193
GLN 6910.0276
GLU 6920.0118
SER 6930.0048
LYS 6940.0136
ASN 6950.0024
ILE 6960.0028
TRP 6970.0031
LYS 6980.0016
LEU 6990.0018
GLN 7000.0017
ARG 7010.0049
ALA 7020.0052
ILE 7030.0072
THR 7040.0102
ILE 7050.0124
LEU 7060.0130
ASP 7070.0165
THR 7080.0156
GLU 7090.0152
LYS 7100.0107
SER 7110.0123
PHE 7120.0115
LEU 7130.0226
LYS 7140.0118
CYS 7150.0386
MET 7160.0366
ARG 7170.0585
LYS 7180.0544
ALA 7190.0202
PHE 7200.0121
ARG 7210.0122
SER 7220.0152
GLY 7230.0089
LYS 7240.0171
LEU 7250.0166
LEU 7260.0208
TYR 7380.0151
ARG 7390.0156
TRP 7400.0143
CYS 7410.0038
PHE 7420.0044
ARG 7430.0055
VAL 7440.0091
ASP 7450.0084
GLU 7460.0085

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.