CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602251020031912105

---  normal mode 100  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0923
VAL 2830.0091
GLY 2840.0032
ASN 2850.0036
THR 2860.0052
VAL 2870.0062
LEU 2880.0042
HIS 2890.0030
ALA 2900.0056
LEU 2910.0061
VAL 2920.0040
GLU 2930.0056
VAL 2940.0069
ALA 2950.0041
ASP 2960.0048
ASN 2970.0051
THR 2980.0148
VAL 2990.0068
ASP 3000.0102
ASN 3010.0027
THR 3020.0060
LYS 3030.0110
PHE 3040.0044
VAL 3050.0031
THR 3060.0050
SER 3070.0023
MET 3080.0031
TYR 3090.0035
ASN 3100.0043
GLU 3110.0049
ILE 3120.0048
LEU 3130.0025
ILE 3140.0031
LEU 3150.0033
GLY 3160.0009
ALA 3170.0023
LYS 3180.0029
LEU 3190.0102
HIS 3200.0062
PRO 3210.0057
THR 3220.0058
LEU 3230.0032
LYS 3240.0052
LEU 3250.0031
GLU 3260.0043
GLU 3270.0052
ILE 3280.0068
THR 3290.0066
ASN 3300.0053
ARG 3310.0094
LYS 3320.0135
GLY 3330.0116
LEU 3340.0060
THR 3350.0059
PRO 3360.0053
LEU 3370.0026
ALA 3380.0024
LEU 3390.0029
ALA 3400.0007
ALA 3410.0015
SER 3420.0027
SER 3430.0022
GLY 3440.0024
LYS 3450.0030
ILE 3460.0022
GLY 3470.0020
VAL 3480.0023
LEU 3490.0017
ALA 3500.0017
TYR 3510.0029
ILE 3520.0024
LEU 3530.0026
GLN 3540.0028
ARG 3550.0045
GLU 3560.0029
ILE 3570.0019
HIS 3580.0121
GLU 3590.0077
PRO 3600.0228
GLU 3610.0064
CYS 3620.0038
ARG 3630.0035
HIS 3640.0034
LEU 3650.0026
SER 3660.0018
ARG 3670.0024
LYS 3680.0027
PHE 3690.0024
THR 3700.0025
GLU 3710.0026
TRP 3720.0024
ALA 3730.0030
TYR 3740.0031
GLY 3750.0042
PRO 3760.0038
VAL 3770.0037
HIS 3780.0032
SER 3790.0007
SER 3800.0015
LEU 3810.0023
TYR 3820.0035
ASP 3830.0035
LEU 3840.0034
SER 3850.0053
CYS 3860.0048
ILE 3870.0052
ASP 3880.0067
THR 3890.0070
CYS 3900.0057
GLU 3910.0110
LYS 3920.0061
ASN 3930.0035
SER 3940.0031
VAL 3950.0043
LEU 3960.0045
GLU 3970.0037
VAL 3980.0037
ILE 3990.0053
ALA 4000.0047
TYR 4010.0047
SER 4020.0040
SER 4030.0105
SER 4040.0119
GLU 4050.0128
THR 4060.0081
PRO 4070.0082
ASN 4080.0046
ARG 4090.0039
HIS 4100.0058
ASP 4110.0080
MET 4120.0056
LEU 4130.0074
LEU 4140.0099
VAL 4150.0051
GLU 4160.0041
PRO 4170.0044
LEU 4180.0057
ASN 4190.0051
ARG 4200.0047
LEU 4210.0058
LEU 4220.0055
GLN 4230.0073
ASP 4240.0074
LYS 4250.0042
TRP 4260.0025
ASP 4270.0057
ARG 4280.0106
PHE 4290.0114
VAL 4300.0073
LYS 4310.0116
ARG 4320.0162
ILE 4330.0113
PHE 4340.0114
TYR 4350.0132
PHE 4360.0127
ASN 4370.0132
PHE 4380.0093
PHE 4390.0066
VAL 4400.0034
TYR 4410.0038
CYS 4420.0046
LEU 4430.0041
TYR 4440.0025
MET 4450.0035
ILE 4460.0046
ILE 4470.0067
PHE 4480.0100
THR 4490.0088
ALA 4500.0118
ALA 4510.0132
ALA 4520.0074
TYR 4530.0199
TYR 4540.0125
ARG 4550.0078
PRO 4560.0076
VAL 4570.0210
GLU 4580.0066
GLY 4590.0127
LEU 4600.0119
PRO 4610.0094
PRO 4620.0088
TYR 4630.0101
LYS 4640.0146
LEU 4650.0091
LYS 4660.0131
ASN 4670.0156
THR 4680.0176
VAL 4690.0035
GLY 4700.0095
ASP 4710.0081
TYR 4720.0040
PHE 4730.0107
ARG 4740.0092
VAL 4750.0049
THR 4760.0059
GLY 4770.0056
GLU 4780.0044
ILE 4790.0036
LEU 4800.0033
SER 4810.0012
VAL 4820.0072
SER 4830.0106
GLY 4840.0118
GLY 4850.0079
VAL 4860.0109
TYR 4870.0150
PHE 4880.0091
PHE 4890.0051
PHE 4900.0075
ARG 4910.0083
GLY 4920.0096
ILE 4930.0077
GLN 4940.0058
TYR 4950.0087
PHE 4960.0103
LEU 4970.0090
GLN 4980.0075
ARG 4990.0076
ARG 5000.0190
PRO 5010.0147
SER 5020.0118
LEU 5030.0116
LYS 5040.0124
SER 5050.0131
LEU 5060.0088
PHE 5070.0079
VAL 5080.0076
ASP 5090.0033
SER 5100.0044
TYR 5110.0033
SER 5120.0074
GLU 5130.0101
ILE 5140.0061
LEU 5150.0082
PHE 5160.0071
PHE 5170.0063
VAL 5180.0068
GLN 5190.0055
SER 5200.0036
LEU 5210.0049
PHE 5220.0035
MET 5230.0050
LEU 5240.0061
VAL 5250.0057
SER 5260.0064
VAL 5270.0058
VAL 5280.0056
LEU 5290.0043
TYR 5300.0026
PHE 5310.0061
SER 5320.0114
GLN 5330.0090
ARG 5340.0025
LYS 5350.0041
GLU 5360.0063
TYR 5370.0048
VAL 5380.0045
ALA 5390.0051
SER 5400.0052
MET 5410.0061
VAL 5420.0070
PHE 5430.0072
SER 5440.0066
LEU 5450.0051
ALA 5460.0053
MET 5470.0046
GLY 5480.0045
TRP 5490.0028
THR 5500.0039
ASN 5510.0040
MET 5520.0022
LEU 5530.0020
TYR 5540.0041
TYR 5550.0033
THR 5560.0110
ARG 5570.0102
GLY 5580.0132
PHE 5590.0174
GLN 5600.0175
GLN 5610.0223
MET 5620.0225
GLY 5630.0123
ILE 5640.0144
TYR 5650.0506
ALA 5660.0306
VAL 5670.0097
MET 5680.0198
ILE 5690.0175
GLU 5700.0084
LYS 5710.0058
MET 5720.0177
ILE 5730.0287
LEU 5740.0177
ARG 5750.0099
ASP 5760.0160
LEU 5770.0439
CYS 5780.0389
ARG 5790.0183
PHE 5800.0121
MET 5810.0121
PHE 5820.0183
VAL 5830.0133
TYR 5840.0153
LEU 5850.0209
VAL 5860.0118
PHE 5870.0114
LEU 5880.0136
PHE 5890.0220
GLY 5900.0158
PHE 5910.0068
SER 5920.0104
THR 5930.0183
ALA 5940.0199
VAL 5950.0128
VAL 5960.0125
THR 5970.0193
LEU 5980.0172
ILE 5990.0191
GLU 6000.0198
ASP 6010.0270
SER 6260.0190
TYR 6270.0134
ASN 6280.0144
SER 6290.0085
LEU 6300.0208
TYR 6310.0218
SER 6320.0101
THR 6330.0147
CYS 6340.0179
LEU 6350.0226
GLU 6360.0173
LEU 6370.0055
PHE 6380.0204
LYS 6390.0126
PHE 6400.0134
THR 6410.0282
ILE 6420.0099
GLY 6430.0480
MET 6440.0923
GLY 6450.0379
ASP 6460.0393
LEU 6470.0239
GLU 6480.0220
PHE 6490.0171
THR 6500.0284
GLU 6510.0437
ASN 6520.0288
TYR 6530.0197
ASP 6540.0044
PHE 6550.0232
LYS 6560.0243
ALA 6570.0396
VAL 6580.0407
PHE 6590.0186
ILE 6600.0170
ILE 6610.0354
LEU 6620.0249
LEU 6630.0216
LEU 6640.0267
ALA 6650.0261
TYR 6660.0188
VAL 6670.0274
ILE 6680.0296
LEU 6690.0162
THR 6700.0225
TYR 6710.0356
ILE 6720.0264
LEU 6730.0105
LEU 6740.0157
LEU 6750.0175
ASN 6760.0065
MET 6770.0415
LEU 6780.0310
ILE 6790.0119
ALA 6800.0221
LEU 6810.0219
MET 6820.0163
GLY 6830.0147
GLU 6840.0260
THR 6850.0263
VAL 6860.0240
ASN 6870.0359
LYS 6880.0271
ILE 6890.0107
ALA 6900.0226
GLN 6910.0203
GLU 6920.0085
SER 6930.0137
LYS 6940.0129
ASN 6950.0106
ILE 6960.0085
TRP 6970.0132
LYS 6980.0120
LEU 6990.0109
GLN 7000.0117
ARG 7010.0120
ALA 7020.0098
ILE 7030.0103
THR 7040.0088
ILE 7050.0044
LEU 7060.0039
ASP 7070.0064
THR 7080.0066
GLU 7090.0037
LYS 7100.0012
SER 7110.0019
PHE 7120.0020
LEU 7130.0054
LYS 7140.0056
CYS 7150.0034
MET 7160.0036
ARG 7170.0036
LYS 7180.0072
ALA 7190.0060
PHE 7200.0053
ARG 7210.0047
SER 7220.0116
GLY 7230.0057
LYS 7240.0124
LEU 7250.0405
LEU 7260.0081
TYR 7380.0080
ARG 7390.0083
TRP 7400.0078
CYS 7410.0066
PHE 7420.0048
ARG 7430.0034
VAL 7440.0034
ASP 7450.0035
GLU 7460.0038

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.