CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602251020031912105

---  normal mode 21  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0952
VAL 2830.0102
GLY 2840.0101
ASN 2850.0080
THR 2860.0070
VAL 2870.0058
LEU 2880.0045
HIS 2890.0050
ALA 2900.0052
LEU 2910.0037
VAL 2920.0035
GLU 2930.0046
VAL 2940.0040
ALA 2950.0030
ASP 2960.0027
ASN 2970.0029
THR 2980.0032
VAL 2990.0054
ASP 3000.0060
ASN 3010.0037
THR 3020.0030
LYS 3030.0047
PHE 3040.0046
VAL 3050.0029
THR 3060.0028
SER 3070.0042
MET 3080.0039
TYR 3090.0023
ASN 3100.0033
GLU 3110.0043
ILE 3120.0037
LEU 3130.0022
ILE 3140.0038
LEU 3150.0047
GLY 3160.0039
ALA 3170.0021
LYS 3180.0029
LEU 3190.0048
HIS 3200.0057
PRO 3210.0046
THR 3220.0076
LEU 3230.0078
LYS 3240.0066
LEU 3250.0053
GLU 3260.0051
GLU 3270.0073
ILE 3280.0072
THR 3290.0076
ASN 3300.0075
ARG 3310.0088
LYS 3320.0081
GLY 3330.0083
LEU 3340.0058
THR 3350.0055
PRO 3360.0045
LEU 3370.0039
ALA 3380.0051
LEU 3390.0044
ALA 3400.0038
ALA 3410.0042
SER 3420.0047
SER 3430.0050
GLY 3440.0049
LYS 3450.0040
ILE 3460.0046
GLY 3470.0033
VAL 3480.0028
LEU 3490.0039
ALA 3500.0042
TYR 3510.0031
ILE 3520.0035
LEU 3530.0043
GLN 3540.0041
ARG 3550.0034
GLU 3560.0050
ILE 3570.0054
HIS 3580.0091
GLU 3590.0097
PRO 3600.0112
GLU 3610.0075
CYS 3620.0057
ARG 3630.0078
HIS 3640.0074
LEU 3650.0050
SER 3660.0056
ARG 3670.0048
LYS 3680.0056
PHE 3690.0065
THR 3700.0068
GLU 3710.0086
TRP 3720.0108
ALA 3730.0114
TYR 3740.0143
GLY 3750.0138
PRO 3760.0136
VAL 3770.0123
HIS 3780.0095
SER 3790.0090
SER 3800.0071
LEU 3810.0063
TYR 3820.0056
ASP 3830.0053
LEU 3840.0055
SER 3850.0048
CYS 3860.0047
ILE 3870.0047
ASP 3880.0044
THR 3890.0049
CYS 3900.0042
GLU 3910.0060
LYS 3920.0050
ASN 3930.0052
SER 3940.0041
VAL 3950.0041
LEU 3960.0040
GLU 3970.0038
VAL 3980.0041
ILE 3990.0045
ALA 4000.0036
TYR 4010.0055
SER 4020.0067
SER 4030.0116
SER 4040.0113
GLU 4050.0108
THR 4060.0060
PRO 4070.0071
ASN 4080.0065
ARG 4090.0059
HIS 4100.0066
ASP 4110.0067
MET 4120.0060
LEU 4130.0058
LEU 4140.0061
VAL 4150.0057
GLU 4160.0059
PRO 4170.0059
LEU 4180.0057
ASN 4190.0066
ARG 4200.0064
LEU 4210.0047
LEU 4220.0047
GLN 4230.0056
ASP 4240.0048
LYS 4250.0034
TRP 4260.0044
ASP 4270.0071
ARG 4280.0071
PHE 4290.0073
VAL 4300.0054
LYS 4310.0071
ARG 4320.0098
ILE 4330.0082
PHE 4340.0052
TYR 4350.0084
PHE 4360.0116
ASN 4370.0077
PHE 4380.0076
PHE 4390.0131
VAL 4400.0124
TYR 4410.0089
CYS 4420.0135
LEU 4430.0152
TYR 4440.0124
MET 4450.0118
ILE 4460.0148
ILE 4470.0139
PHE 4480.0115
THR 4490.0111
ALA 4500.0120
ALA 4510.0089
ALA 4520.0086
TYR 4530.0076
TYR 4540.0083
ARG 4550.0084
PRO 4560.0087
VAL 4570.0126
GLU 4580.0110
GLY 4590.0120
LEU 4600.0133
PRO 4610.0106
PRO 4620.0096
TYR 4630.0126
LYS 4640.0197
LEU 4650.0220
LYS 4660.0298
ASN 4670.0403
THR 4680.0378
VAL 4690.0304
GLY 4700.0233
ASP 4710.0154
TYR 4720.0185
PHE 4730.0093
ARG 4740.0084
VAL 4750.0110
THR 4760.0124
GLY 4770.0118
GLU 4780.0104
ILE 4790.0126
LEU 4800.0136
SER 4810.0102
VAL 4820.0089
SER 4830.0087
GLY 4840.0092
GLY 4850.0057
VAL 4860.0081
TYR 4870.0115
PHE 4880.0065
PHE 4890.0090
PHE 4900.0160
ARG 4910.0138
GLY 4920.0131
ILE 4930.0218
GLN 4940.0244
TYR 4950.0199
PHE 4960.0272
LEU 4970.0349
GLN 4980.0341
ARG 4990.0319
ARG 5000.0400
PRO 5010.0378
SER 5020.0498
LEU 5030.0510
LYS 5040.0585
SER 5050.0408
LEU 5060.0310
PHE 5070.0284
VAL 5080.0309
ASP 5090.0211
SER 5100.0157
TYR 5110.0190
SER 5120.0125
GLU 5130.0088
ILE 5140.0139
LEU 5150.0121
PHE 5160.0063
PHE 5170.0084
VAL 5180.0096
GLN 5190.0062
SER 5200.0033
LEU 5210.0044
PHE 5220.0048
MET 5230.0052
LEU 5240.0039
VAL 5250.0050
SER 5260.0080
VAL 5270.0072
VAL 5280.0090
LEU 5290.0116
TYR 5300.0101
PHE 5310.0110
SER 5320.0146
GLN 5330.0140
ARG 5340.0148
LYS 5350.0135
GLU 5360.0135
TYR 5370.0104
VAL 5380.0108
ALA 5390.0095
SER 5400.0073
MET 5410.0079
VAL 5420.0108
PHE 5430.0094
SER 5440.0069
LEU 5450.0093
ALA 5460.0109
MET 5470.0099
GLY 5480.0082
TRP 5490.0116
THR 5500.0132
ASN 5510.0092
MET 5520.0097
LEU 5530.0097
TYR 5540.0076
TYR 5550.0068
THR 5560.0089
ARG 5570.0080
GLY 5580.0063
PHE 5590.0056
GLN 5600.0054
GLN 5610.0101
MET 5620.0101
GLY 5630.0079
ILE 5640.0102
TYR 5650.0159
ALA 5660.0156
VAL 5670.0115
MET 5680.0138
ILE 5690.0208
GLU 5700.0200
LYS 5710.0131
MET 5720.0114
ILE 5730.0241
LEU 5740.0279
ARG 5750.0200
ASP 5760.0097
LEU 5770.0162
CYS 5780.0277
ARG 5790.0222
PHE 5800.0095
MET 5810.0147
PHE 5820.0171
VAL 5830.0101
TYR 5840.0094
LEU 5850.0122
VAL 5860.0089
PHE 5870.0084
LEU 5880.0083
PHE 5890.0065
GLY 5900.0089
PHE 5910.0073
SER 5920.0046
THR 5930.0074
ALA 5940.0077
VAL 5950.0036
VAL 5960.0064
THR 5970.0104
LEU 5980.0090
ILE 5990.0097
GLU 6000.0157
ASP 6010.0212
SER 6260.0158
TYR 6270.0106
ASN 6280.0124
SER 6290.0088
LEU 6300.0065
TYR 6310.0041
SER 6320.0038
THR 6330.0014
CYS 6340.0029
LEU 6350.0030
GLU 6360.0046
LEU 6370.0060
PHE 6380.0068
LYS 6390.0074
PHE 6400.0089
THR 6410.0087
ILE 6420.0095
GLY 6430.0092
MET 6440.0097
GLY 6450.0087
ASP 6460.0106
LEU 6470.0110
GLU 6480.0108
PHE 6490.0103
THR 6500.0116
GLU 6510.0136
ASN 6520.0148
TYR 6530.0109
ASP 6540.0092
PHE 6550.0044
LYS 6560.0036
ALA 6570.0053
VAL 6580.0059
PHE 6590.0029
ILE 6600.0076
ILE 6610.0106
LEU 6620.0088
LEU 6630.0085
LEU 6640.0126
ALA 6650.0126
TYR 6660.0108
VAL 6670.0112
ILE 6680.0118
LEU 6690.0104
THR 6700.0087
TYR 6710.0077
ILE 6720.0076
LEU 6730.0054
LEU 6740.0016
LEU 6750.0095
ASN 6760.0147
MET 6770.0241
LEU 6780.0193
ILE 6790.0402
ALA 6800.0555
LEU 6810.0488
MET 6820.0460
GLY 6830.0851
GLU 6840.0952
THR 6850.0595
VAL 6860.0529
ASN 6870.0941
LYS 6880.0812
ILE 6890.0294
ALA 6900.0284
GLN 6910.0186
GLU 6920.0101
SER 6930.0019
LYS 6940.0075
ASN 6950.0040
ILE 6960.0048
TRP 6970.0052
LYS 6980.0052
LEU 6990.0052
GLN 7000.0053
ARG 7010.0041
ALA 7020.0031
ILE 7030.0034
THR 7040.0016
ILE 7050.0009
LEU 7060.0020
ASP 7070.0042
THR 7080.0047
GLU 7090.0056
LYS 7100.0096
SER 7110.0093
PHE 7120.0114
LEU 7130.0188
LYS 7140.0185
CYS 7150.0194
MET 7160.0123
ARG 7170.0113
LYS 7180.0069
ALA 7190.0062
PHE 7200.0046
ARG 7210.0033
SER 7220.0047
GLY 7230.0055
LYS 7240.0065
LEU 7250.0069
LEU 7260.0074
TYR 7380.0071
ARG 7390.0068
TRP 7400.0060
CYS 7410.0056
PHE 7420.0063
ARG 7430.0068
VAL 7440.0082
ASP 7450.0095
GLU 7460.0088

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.