CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602251020031912105

---  normal mode 57  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0858
VAL 2830.0577
GLY 2840.0413
ASN 2850.0258
THR 2860.0095
VAL 2870.0096
LEU 2880.0105
HIS 2890.0087
ALA 2900.0101
LEU 2910.0094
VAL 2920.0111
GLU 2930.0113
VAL 2940.0146
ALA 2950.0130
ASP 2960.0198
ASN 2970.0181
THR 2980.0299
VAL 2990.0325
ASP 3000.0217
ASN 3010.0073
THR 3020.0129
LYS 3030.0188
PHE 3040.0119
VAL 3050.0050
THR 3060.0064
SER 3070.0111
MET 3080.0099
TYR 3090.0056
ASN 3100.0047
GLU 3110.0054
ILE 3120.0053
LEU 3130.0016
ILE 3140.0039
LEU 3150.0060
GLY 3160.0061
ALA 3170.0056
LYS 3180.0123
LEU 3190.0173
HIS 3200.0113
PRO 3210.0076
THR 3220.0250
LEU 3230.0184
LYS 3240.0104
LEU 3250.0036
GLU 3260.0027
GLU 3270.0033
ILE 3280.0066
THR 3290.0084
ASN 3300.0095
ARG 3310.0108
LYS 3320.0175
GLY 3330.0072
LEU 3340.0122
THR 3350.0087
PRO 3360.0084
LEU 3370.0072
ALA 3380.0063
LEU 3390.0077
ALA 3400.0087
ALA 3410.0077
SER 3420.0075
SER 3430.0082
GLY 3440.0094
LYS 3450.0107
ILE 3460.0084
GLY 3470.0090
VAL 3480.0088
LEU 3490.0085
ALA 3500.0079
TYR 3510.0084
ILE 3520.0100
LEU 3530.0092
GLN 3540.0112
ARG 3550.0133
GLU 3560.0140
ILE 3570.0135
HIS 3580.0301
GLU 3590.0191
PRO 3600.0178
GLU 3610.0231
CYS 3620.0144
ARG 3630.0111
HIS 3640.0137
LEU 3650.0092
SER 3660.0105
ARG 3670.0106
LYS 3680.0117
PHE 3690.0134
THR 3700.0101
GLU 3710.0130
TRP 3720.0118
ALA 3730.0143
TYR 3740.0132
GLY 3750.0153
PRO 3760.0168
VAL 3770.0121
HIS 3780.0095
SER 3790.0075
SER 3800.0081
LEU 3810.0093
TYR 3820.0057
ASP 3830.0039
LEU 3840.0029
SER 3850.0144
CYS 3860.0120
ILE 3870.0062
ASP 3880.0072
THR 3890.0217
CYS 3900.0343
GLU 3910.0858
LYS 3920.0644
ASN 3930.0440
SER 3940.0133
VAL 3950.0076
LEU 3960.0106
GLU 3970.0156
VAL 3980.0128
ILE 3990.0145
ALA 4000.0147
TYR 4010.0133
SER 4020.0109
SER 4030.0143
SER 4040.0127
GLU 4050.0127
THR 4060.0105
PRO 4070.0098
ASN 4080.0088
ARG 4090.0114
HIS 4100.0100
ASP 4110.0083
MET 4120.0089
LEU 4130.0091
LEU 4140.0097
VAL 4150.0100
GLU 4160.0089
PRO 4170.0072
LEU 4180.0068
ASN 4190.0072
ARG 4200.0062
LEU 4210.0043
LEU 4220.0058
GLN 4230.0069
ASP 4240.0044
LYS 4250.0041
TRP 4260.0067
ASP 4270.0071
ARG 4280.0048
PHE 4290.0042
VAL 4300.0085
LYS 4310.0095
ARG 4320.0106
ILE 4330.0137
PHE 4340.0119
TYR 4350.0114
PHE 4360.0187
ASN 4370.0163
PHE 4380.0100
PHE 4390.0134
VAL 4400.0112
TYR 4410.0063
CYS 4420.0085
LEU 4430.0095
TYR 4440.0074
MET 4450.0073
ILE 4460.0108
ILE 4470.0107
PHE 4480.0098
THR 4490.0089
ALA 4500.0093
ALA 4510.0072
ALA 4520.0061
TYR 4530.0041
TYR 4540.0038
ARG 4550.0043
PRO 4560.0050
VAL 4570.0098
GLU 4580.0121
GLY 4590.0154
LEU 4600.0200
PRO 4610.0161
PRO 4620.0219
TYR 4630.0106
LYS 4640.0095
LEU 4650.0157
LYS 4660.0206
ASN 4670.0264
THR 4680.0196
VAL 4690.0205
GLY 4700.0206
ASP 4710.0176
TYR 4720.0185
PHE 4730.0197
ARG 4740.0170
VAL 4750.0135
THR 4760.0097
GLY 4770.0101
GLU 4780.0113
ILE 4790.0120
LEU 4800.0124
SER 4810.0114
VAL 4820.0120
SER 4830.0128
GLY 4840.0105
GLY 4850.0067
VAL 4860.0056
TYR 4870.0087
PHE 4880.0075
PHE 4890.0090
PHE 4900.0199
ARG 4910.0209
GLY 4920.0134
ILE 4930.0234
GLN 4940.0302
TYR 4950.0203
PHE 4960.0082
LEU 4970.0182
GLN 4980.0201
ARG 4990.0168
ARG 5000.0151
PRO 5010.0251
SER 5020.0440
LEU 5030.0384
LYS 5040.0186
SER 5050.0108
LEU 5060.0122
PHE 5070.0098
VAL 5080.0125
ASP 5090.0130
SER 5100.0118
TYR 5110.0052
SER 5120.0048
GLU 5130.0059
ILE 5140.0040
LEU 5150.0039
PHE 5160.0042
PHE 5170.0064
VAL 5180.0089
GLN 5190.0070
SER 5200.0066
LEU 5210.0107
PHE 5220.0135
MET 5230.0120
LEU 5240.0156
VAL 5250.0182
SER 5260.0179
VAL 5270.0222
VAL 5280.0240
LEU 5290.0130
TYR 5300.0117
PHE 5310.0151
SER 5320.0120
GLN 5330.0099
ARG 5340.0115
LYS 5350.0087
GLU 5360.0107
TYR 5370.0091
VAL 5380.0099
ALA 5390.0100
SER 5400.0134
MET 5410.0120
VAL 5420.0137
PHE 5430.0129
SER 5440.0097
LEU 5450.0089
ALA 5460.0074
MET 5470.0066
GLY 5480.0051
TRP 5490.0042
THR 5500.0040
ASN 5510.0032
MET 5520.0033
LEU 5530.0059
TYR 5540.0071
TYR 5550.0061
THR 5560.0065
ARG 5570.0073
GLY 5580.0054
PHE 5590.0033
GLN 5600.0039
GLN 5610.0102
MET 5620.0086
GLY 5630.0103
ILE 5640.0142
TYR 5650.0157
ALA 5660.0157
VAL 5670.0155
MET 5680.0132
ILE 5690.0141
GLU 5700.0132
LYS 5710.0157
MET 5720.0084
ILE 5730.0067
LEU 5740.0154
ARG 5750.0146
ASP 5760.0066
LEU 5770.0204
CYS 5780.0230
ARG 5790.0142
PHE 5800.0194
MET 5810.0230
PHE 5820.0193
VAL 5830.0134
TYR 5840.0135
LEU 5850.0142
VAL 5860.0095
PHE 5870.0043
LEU 5880.0037
PHE 5890.0089
GLY 5900.0097
PHE 5910.0071
SER 5920.0065
THR 5930.0081
ALA 5940.0087
VAL 5950.0058
VAL 5960.0059
THR 5970.0050
LEU 5980.0050
ILE 5990.0040
GLU 6000.0095
ASP 6010.0177
SER 6260.0075
TYR 6270.0068
ASN 6280.0097
SER 6290.0112
LEU 6300.0091
TYR 6310.0132
SER 6320.0088
THR 6330.0070
CYS 6340.0091
LEU 6350.0092
GLU 6360.0085
LEU 6370.0073
PHE 6380.0062
LYS 6390.0065
PHE 6400.0055
THR 6410.0029
ILE 6420.0029
GLY 6430.0053
MET 6440.0120
GLY 6450.0090
ASP 6460.0088
LEU 6470.0096
GLU 6480.0074
PHE 6490.0059
THR 6500.0041
GLU 6510.0085
ASN 6520.0083
TYR 6530.0061
ASP 6540.0078
PHE 6550.0047
LYS 6560.0073
ALA 6570.0088
VAL 6580.0072
PHE 6590.0066
ILE 6600.0092
ILE 6610.0113
LEU 6620.0090
LEU 6630.0077
LEU 6640.0077
ALA 6650.0059
TYR 6660.0035
VAL 6670.0035
ILE 6680.0086
LEU 6690.0064
THR 6700.0090
TYR 6710.0084
ILE 6720.0149
LEU 6730.0184
LEU 6740.0177
LEU 6750.0219
ASN 6760.0232
MET 6770.0204
LEU 6780.0190
ILE 6790.0194
ALA 6800.0159
LEU 6810.0091
MET 6820.0147
GLY 6830.0311
GLU 6840.0264
THR 6850.0251
VAL 6860.0477
ASN 6870.0497
LYS 6880.0286
ILE 6890.0316
ALA 6900.0328
GLN 6910.0246
GLU 6920.0211
SER 6930.0221
LYS 6940.0154
ASN 6950.0113
ILE 6960.0143
TRP 6970.0096
LYS 6980.0078
LEU 6990.0079
GLN 7000.0075
ARG 7010.0072
ALA 7020.0068
ILE 7030.0065
THR 7040.0099
ILE 7050.0071
LEU 7060.0073
ASP 7070.0120
THR 7080.0087
GLU 7090.0065
LYS 7100.0133
SER 7110.0079
PHE 7120.0088
LEU 7130.0597
LYS 7140.0204
CYS 7150.0456
MET 7160.0137
ARG 7170.0192
LYS 7180.0202
ALA 7190.0076
PHE 7200.0073
ARG 7210.0053
SER 7220.0086
GLY 7230.0075
LYS 7240.0215
LEU 7250.0207
LEU 7260.0215
TYR 7380.0111
ARG 7390.0048
TRP 7400.0054
CYS 7410.0035
PHE 7420.0045
ARG 7430.0051
VAL 7440.0070
ASP 7450.0053
GLU 7460.0054

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.