CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602251020031912105

---  normal mode 83  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0657
VAL 2830.0246
GLY 2840.0177
ASN 2850.0066
THR 2860.0067
VAL 2870.0059
LEU 2880.0042
HIS 2890.0029
ALA 2900.0042
LEU 2910.0059
VAL 2920.0044
GLU 2930.0051
VAL 2940.0130
ALA 2950.0146
ASP 2960.0219
ASN 2970.0202
THR 2980.0320
VAL 2990.0205
ASP 3000.0175
ASN 3010.0116
THR 3020.0126
LYS 3030.0131
PHE 3040.0076
VAL 3050.0070
THR 3060.0046
SER 3070.0052
MET 3080.0045
TYR 3090.0031
ASN 3100.0044
GLU 3110.0043
ILE 3120.0043
LEU 3130.0048
ILE 3140.0089
LEU 3150.0097
GLY 3160.0086
ALA 3170.0084
LYS 3180.0112
LEU 3190.0109
HIS 3200.0116
PRO 3210.0111
THR 3220.0159
LEU 3230.0095
LYS 3240.0052
LEU 3250.0038
GLU 3260.0038
GLU 3270.0044
ILE 3280.0091
THR 3290.0080
ASN 3300.0049
ARG 3310.0116
LYS 3320.0131
GLY 3330.0214
LEU 3340.0097
THR 3350.0066
PRO 3360.0040
LEU 3370.0059
ALA 3380.0066
LEU 3390.0064
ALA 3400.0077
ALA 3410.0088
SER 3420.0091
SER 3430.0067
GLY 3440.0058
LYS 3450.0052
ILE 3460.0066
GLY 3470.0063
VAL 3480.0051
LEU 3490.0078
ALA 3500.0081
TYR 3510.0065
ILE 3520.0073
LEU 3530.0068
GLN 3540.0065
ARG 3550.0048
GLU 3560.0036
ILE 3570.0047
HIS 3580.0077
GLU 3590.0074
PRO 3600.0133
GLU 3610.0084
CYS 3620.0077
ARG 3630.0077
HIS 3640.0084
LEU 3650.0085
SER 3660.0064
ARG 3670.0048
LYS 3680.0029
PHE 3690.0018
THR 3700.0022
GLU 3710.0042
TRP 3720.0040
ALA 3730.0047
TYR 3740.0031
GLY 3750.0024
PRO 3760.0060
VAL 3770.0027
HIS 3780.0026
SER 3790.0040
SER 3800.0026
LEU 3810.0021
TYR 3820.0030
ASP 3830.0030
LEU 3840.0032
SER 3850.0025
CYS 3860.0019
ILE 3870.0019
ASP 3880.0055
THR 3890.0054
CYS 3900.0062
GLU 3910.0131
LYS 3920.0028
ASN 3930.0042
SER 3940.0034
VAL 3950.0034
LEU 3960.0039
GLU 3970.0046
VAL 3980.0053
ILE 3990.0078
ALA 4000.0088
TYR 4010.0056
SER 4020.0072
SER 4030.0181
SER 4040.0047
GLU 4050.0213
THR 4060.0116
PRO 4070.0092
ASN 4080.0087
ARG 4090.0093
HIS 4100.0106
ASP 4110.0118
MET 4120.0085
LEU 4130.0072
LEU 4140.0095
VAL 4150.0091
GLU 4160.0063
PRO 4170.0038
LEU 4180.0036
ASN 4190.0025
ARG 4200.0018
LEU 4210.0060
LEU 4220.0084
GLN 4230.0116
ASP 4240.0130
LYS 4250.0086
TRP 4260.0147
ASP 4270.0205
ARG 4280.0168
PHE 4290.0131
VAL 4300.0117
LYS 4310.0310
ARG 4320.0363
ILE 4330.0169
PHE 4340.0116
TYR 4350.0147
PHE 4360.0168
ASN 4370.0144
PHE 4380.0089
PHE 4390.0132
VAL 4400.0146
TYR 4410.0078
CYS 4420.0073
LEU 4430.0102
TYR 4440.0055
MET 4450.0040
ILE 4460.0096
ILE 4470.0096
PHE 4480.0093
THR 4490.0094
ALA 4500.0114
ALA 4510.0121
ALA 4520.0114
TYR 4530.0108
TYR 4540.0103
ARG 4550.0081
PRO 4560.0056
VAL 4570.0174
GLU 4580.0106
GLY 4590.0201
LEU 4600.0229
PRO 4610.0083
PRO 4620.0127
TYR 4630.0052
LYS 4640.0050
LEU 4650.0060
LYS 4660.0131
ASN 4670.0120
THR 4680.0056
VAL 4690.0120
GLY 4700.0116
ASP 4710.0056
TYR 4720.0058
PHE 4730.0059
ARG 4740.0044
VAL 4750.0074
THR 4760.0032
GLY 4770.0062
GLU 4780.0080
ILE 4790.0071
LEU 4800.0074
SER 4810.0072
VAL 4820.0085
SER 4830.0107
GLY 4840.0111
GLY 4850.0096
VAL 4860.0141
TYR 4870.0160
PHE 4880.0083
PHE 4890.0110
PHE 4900.0140
ARG 4910.0103
GLY 4920.0062
ILE 4930.0084
GLN 4940.0102
TYR 4950.0089
PHE 4960.0078
LEU 4970.0100
GLN 4980.0141
ARG 4990.0098
ARG 5000.0102
PRO 5010.0066
SER 5020.0069
LEU 5030.0076
LYS 5040.0191
SER 5050.0067
LEU 5060.0069
PHE 5070.0074
VAL 5080.0051
ASP 5090.0038
SER 5100.0061
TYR 5110.0056
SER 5120.0051
GLU 5130.0085
ILE 5140.0062
LEU 5150.0080
PHE 5160.0052
PHE 5170.0065
VAL 5180.0098
GLN 5190.0068
SER 5200.0081
LEU 5210.0113
PHE 5220.0089
MET 5230.0064
LEU 5240.0070
VAL 5250.0048
SER 5260.0091
VAL 5270.0103
VAL 5280.0161
LEU 5290.0149
TYR 5300.0102
PHE 5310.0131
SER 5320.0186
GLN 5330.0054
ARG 5340.0165
LYS 5350.0123
GLU 5360.0174
TYR 5370.0142
VAL 5380.0092
ALA 5390.0055
SER 5400.0063
MET 5410.0075
VAL 5420.0039
PHE 5430.0059
SER 5440.0078
LEU 5450.0056
ALA 5460.0059
MET 5470.0073
GLY 5480.0042
TRP 5490.0032
THR 5500.0081
ASN 5510.0070
MET 5520.0065
LEU 5530.0086
TYR 5540.0093
TYR 5550.0080
THR 5560.0099
ARG 5570.0102
GLY 5580.0097
PHE 5590.0135
GLN 5600.0174
GLN 5610.0317
MET 5620.0234
GLY 5630.0218
ILE 5640.0261
TYR 5650.0251
ALA 5660.0217
VAL 5670.0227
MET 5680.0173
ILE 5690.0166
GLU 5700.0165
LYS 5710.0160
MET 5720.0160
ILE 5730.0158
LEU 5740.0142
ARG 5750.0170
ASP 5760.0231
LEU 5770.0246
CYS 5780.0289
ARG 5790.0272
PHE 5800.0142
MET 5810.0201
PHE 5820.0280
VAL 5830.0191
TYR 5840.0147
LEU 5850.0209
VAL 5860.0233
PHE 5870.0219
LEU 5880.0169
PHE 5890.0144
GLY 5900.0122
PHE 5910.0094
SER 5920.0069
THR 5930.0061
ALA 5940.0083
VAL 5950.0124
VAL 5960.0172
THR 5970.0163
LEU 5980.0223
ILE 5990.0161
GLU 6000.0152
ASP 6010.0248
SER 6260.0266
TYR 6270.0272
ASN 6280.0287
SER 6290.0363
LEU 6300.0048
TYR 6310.0328
SER 6320.0174
THR 6330.0070
CYS 6340.0114
LEU 6350.0055
GLU 6360.0064
LEU 6370.0090
PHE 6380.0100
LYS 6390.0116
PHE 6400.0149
THR 6410.0169
ILE 6420.0171
GLY 6430.0240
MET 6440.0218
GLY 6450.0176
ASP 6460.0183
LEU 6470.0185
GLU 6480.0171
PHE 6490.0188
THR 6500.0320
GLU 6510.0299
ASN 6520.0140
TYR 6530.0152
ASP 6540.0269
PHE 6550.0209
LYS 6560.0207
ALA 6570.0357
VAL 6580.0382
PHE 6590.0260
ILE 6600.0285
ILE 6610.0341
LEU 6620.0144
LEU 6630.0093
LEU 6640.0093
ALA 6650.0212
TYR 6660.0187
VAL 6670.0182
ILE 6680.0313
LEU 6690.0275
THR 6700.0184
TYR 6710.0209
ILE 6720.0244
LEU 6730.0173
LEU 6740.0095
LEU 6750.0204
ASN 6760.0296
MET 6770.0380
LEU 6780.0126
ILE 6790.0202
ALA 6800.0227
LEU 6810.0241
MET 6820.0242
GLY 6830.0398
GLU 6840.0039
THR 6850.0518
VAL 6860.0657
ASN 6870.0392
LYS 6880.0251
ILE 6890.0272
ALA 6900.0275
GLN 6910.0128
GLU 6920.0133
SER 6930.0096
LYS 6940.0168
ASN 6950.0145
ILE 6960.0124
TRP 6970.0135
LYS 6980.0095
LEU 6990.0062
GLN 7000.0062
ARG 7010.0077
ALA 7020.0082
ILE 7030.0076
THR 7040.0104
ILE 7050.0076
LEU 7060.0088
ASP 7070.0102
THR 7080.0059
GLU 7090.0079
LYS 7100.0133
SER 7110.0121
PHE 7120.0136
LEU 7130.0213
LYS 7140.0217
CYS 7150.0369
MET 7160.0294
ARG 7170.0284
LYS 7180.0253
ALA 7190.0132
PHE 7200.0124
ARG 7210.0123
SER 7220.0069
GLY 7230.0091
LYS 7240.0082
LEU 7250.0042
LEU 7260.0128
TYR 7380.0089
ARG 7390.0092
TRP 7400.0090
CYS 7410.0048
PHE 7420.0030
ARG 7430.0020
VAL 7440.0050
ASP 7450.0063
GLU 7460.0069

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.