CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602251020031912105

---  normal mode 96  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0602
VAL 2830.0143
GLY 2840.0096
ASN 2850.0037
THR 2860.0099
VAL 2870.0119
LEU 2880.0077
HIS 2890.0050
ALA 2900.0098
LEU 2910.0098
VAL 2920.0065
GLU 2930.0111
VAL 2940.0126
ALA 2950.0075
ASP 2960.0119
ASN 2970.0156
THR 2980.0362
VAL 2990.0129
ASP 3000.0236
ASN 3010.0058
THR 3020.0155
LYS 3030.0232
PHE 3040.0074
VAL 3050.0070
THR 3060.0099
SER 3070.0060
MET 3080.0065
TYR 3090.0068
ASN 3100.0063
GLU 3110.0073
ILE 3120.0078
LEU 3130.0048
ILE 3140.0050
LEU 3150.0082
GLY 3160.0054
ALA 3170.0043
LYS 3180.0039
LEU 3190.0099
HIS 3200.0060
PRO 3210.0068
THR 3220.0098
LEU 3230.0045
LYS 3240.0055
LEU 3250.0045
GLU 3260.0051
GLU 3270.0049
ILE 3280.0117
THR 3290.0096
ASN 3300.0076
ARG 3310.0042
LYS 3320.0104
GLY 3330.0119
LEU 3340.0079
THR 3350.0080
PRO 3360.0077
LEU 3370.0062
ALA 3380.0071
LEU 3390.0068
ALA 3400.0084
ALA 3410.0086
SER 3420.0088
SER 3430.0114
GLY 3440.0101
LYS 3450.0076
ILE 3460.0084
GLY 3470.0046
VAL 3480.0047
LEU 3490.0060
ALA 3500.0052
TYR 3510.0034
ILE 3520.0037
LEU 3530.0037
GLN 3540.0040
ARG 3550.0028
GLU 3560.0053
ILE 3570.0060
HIS 3580.0073
GLU 3590.0095
PRO 3600.0134
GLU 3610.0060
CYS 3620.0053
ARG 3630.0073
HIS 3640.0069
LEU 3650.0050
SER 3660.0040
ARG 3670.0024
LYS 3680.0031
PHE 3690.0049
THR 3700.0093
GLU 3710.0089
TRP 3720.0091
ALA 3730.0054
TYR 3740.0029
GLY 3750.0086
PRO 3760.0093
VAL 3770.0075
HIS 3780.0077
SER 3790.0073
SER 3800.0071
LEU 3810.0070
TYR 3820.0039
ASP 3830.0036
LEU 3840.0070
SER 3850.0075
CYS 3860.0084
ILE 3870.0085
ASP 3880.0146
THR 3890.0149
CYS 3900.0142
GLU 3910.0230
LYS 3920.0163
ASN 3930.0093
SER 3940.0065
VAL 3950.0062
LEU 3960.0078
GLU 3970.0080
VAL 3980.0055
ILE 3990.0089
ALA 4000.0121
TYR 4010.0095
SER 4020.0106
SER 4030.0112
SER 4040.0232
GLU 4050.0237
THR 4060.0118
PRO 4070.0104
ASN 4080.0107
ARG 4090.0091
HIS 4100.0047
ASP 4110.0053
MET 4120.0057
LEU 4130.0054
LEU 4140.0064
VAL 4150.0054
GLU 4160.0044
PRO 4170.0037
LEU 4180.0038
ASN 4190.0038
ARG 4200.0039
LEU 4210.0048
LEU 4220.0070
GLN 4230.0119
ASP 4240.0141
LYS 4250.0103
TRP 4260.0141
ASP 4270.0226
ARG 4280.0195
PHE 4290.0137
VAL 4300.0097
LYS 4310.0250
ARG 4320.0212
ILE 4330.0044
PHE 4340.0078
TYR 4350.0120
PHE 4360.0071
ASN 4370.0099
PHE 4380.0091
PHE 4390.0081
VAL 4400.0087
TYR 4410.0069
CYS 4420.0062
LEU 4430.0080
TYR 4440.0061
MET 4450.0105
ILE 4460.0149
ILE 4470.0163
PHE 4480.0126
THR 4490.0101
ALA 4500.0126
ALA 4510.0075
ALA 4520.0105
TYR 4530.0199
TYR 4540.0129
ARG 4550.0132
PRO 4560.0136
VAL 4570.0227
GLU 4580.0139
GLY 4590.0095
LEU 4600.0130
PRO 4610.0117
PRO 4620.0119
TYR 4630.0208
LYS 4640.0256
LEU 4650.0110
LYS 4660.0052
ASN 4670.0114
THR 4680.0113
VAL 4690.0127
GLY 4700.0167
ASP 4710.0149
TYR 4720.0081
PHE 4730.0098
ARG 4740.0095
VAL 4750.0125
THR 4760.0164
GLY 4770.0113
GLU 4780.0116
ILE 4790.0224
LEU 4800.0219
SER 4810.0090
VAL 4820.0068
SER 4830.0078
GLY 4840.0148
GLY 4850.0095
VAL 4860.0199
TYR 4870.0264
PHE 4880.0128
PHE 4890.0121
PHE 4900.0167
ARG 4910.0154
GLY 4920.0107
ILE 4930.0094
GLN 4940.0099
TYR 4950.0112
PHE 4960.0163
LEU 4970.0242
GLN 4980.0209
ARG 4990.0031
ARG 5000.0177
PRO 5010.0216
SER 5020.0146
LEU 5030.0269
LYS 5040.0237
SER 5050.0198
LEU 5060.0176
PHE 5070.0179
VAL 5080.0168
ASP 5090.0122
SER 5100.0060
TYR 5110.0081
SER 5120.0118
GLU 5130.0109
ILE 5140.0102
LEU 5150.0146
PHE 5160.0118
PHE 5170.0097
VAL 5180.0137
GLN 5190.0114
SER 5200.0071
LEU 5210.0151
PHE 5220.0118
MET 5230.0068
LEU 5240.0108
VAL 5250.0095
SER 5260.0034
VAL 5270.0048
VAL 5280.0052
LEU 5290.0092
TYR 5300.0105
PHE 5310.0098
SER 5320.0150
GLN 5330.0171
ARG 5340.0175
LYS 5350.0094
GLU 5360.0093
TYR 5370.0097
VAL 5380.0136
ALA 5390.0134
SER 5400.0112
MET 5410.0112
VAL 5420.0191
PHE 5430.0179
SER 5440.0133
LEU 5450.0149
ALA 5460.0176
MET 5470.0152
GLY 5480.0119
TRP 5490.0163
THR 5500.0138
ASN 5510.0128
MET 5520.0111
LEU 5530.0042
TYR 5540.0045
TYR 5550.0036
THR 5560.0054
ARG 5570.0072
GLY 5580.0080
PHE 5590.0160
GLN 5600.0244
GLN 5610.0333
MET 5620.0197
GLY 5630.0153
ILE 5640.0207
TYR 5650.0132
ALA 5660.0120
VAL 5670.0143
MET 5680.0126
ILE 5690.0132
GLU 5700.0141
LYS 5710.0103
MET 5720.0120
ILE 5730.0123
LEU 5740.0106
ARG 5750.0123
ASP 5760.0098
LEU 5770.0131
CYS 5780.0271
ARG 5790.0380
PHE 5800.0237
MET 5810.0116
PHE 5820.0176
VAL 5830.0223
TYR 5840.0214
LEU 5850.0161
VAL 5860.0199
PHE 5870.0203
LEU 5880.0191
PHE 5890.0118
GLY 5900.0118
PHE 5910.0121
SER 5920.0093
THR 5930.0129
ALA 5940.0138
VAL 5950.0071
VAL 5960.0148
THR 5970.0213
LEU 5980.0129
ILE 5990.0127
GLU 6000.0135
ASP 6010.0120
SER 6260.0180
TYR 6270.0184
ASN 6280.0159
SER 6290.0268
LEU 6300.0218
TYR 6310.0267
SER 6320.0160
THR 6330.0046
CYS 6340.0072
LEU 6350.0170
GLU 6360.0186
LEU 6370.0189
PHE 6380.0271
LYS 6390.0215
PHE 6400.0203
THR 6410.0214
ILE 6420.0283
GLY 6430.0466
MET 6440.0602
GLY 6450.0328
ASP 6460.0368
LEU 6470.0192
GLU 6480.0189
PHE 6490.0210
THR 6500.0268
GLU 6510.0243
ASN 6520.0195
TYR 6530.0129
ASP 6540.0161
PHE 6550.0198
LYS 6560.0249
ALA 6570.0228
VAL 6580.0119
PHE 6590.0062
ILE 6600.0122
ILE 6610.0168
LEU 6620.0092
LEU 6630.0067
LEU 6640.0081
ALA 6650.0153
TYR 6660.0158
VAL 6670.0097
ILE 6680.0120
LEU 6690.0185
THR 6700.0151
TYR 6710.0073
ILE 6720.0138
LEU 6730.0225
LEU 6740.0145
LEU 6750.0075
ASN 6760.0117
MET 6770.0078
LEU 6780.0081
ILE 6790.0088
ALA 6800.0189
LEU 6810.0141
MET 6820.0040
GLY 6830.0318
GLU 6840.0141
THR 6850.0195
VAL 6860.0402
ASN 6870.0347
LYS 6880.0276
ILE 6890.0218
ALA 6900.0102
GLN 6910.0105
GLU 6920.0198
SER 6930.0126
LYS 6940.0171
ASN 6950.0144
ILE 6960.0132
TRP 6970.0136
LYS 6980.0065
LEU 6990.0085
GLN 7000.0083
ARG 7010.0079
ALA 7020.0082
ILE 7030.0081
THR 7040.0087
ILE 7050.0082
LEU 7060.0070
ASP 7070.0067
THR 7080.0077
GLU 7090.0056
LYS 7100.0044
SER 7110.0049
PHE 7120.0069
LEU 7130.0114
LYS 7140.0117
CYS 7150.0191
MET 7160.0138
ARG 7170.0153
LYS 7180.0150
ALA 7190.0077
PHE 7200.0047
ARG 7210.0067
SER 7220.0270
GLY 7230.0229
LYS 7240.0276
LEU 7250.0320
LEU 7260.0323
TYR 7380.0218
ARG 7390.0183
TRP 7400.0174
CYS 7410.0086
PHE 7420.0063
ARG 7430.0041
VAL 7440.0044
ASP 7450.0035
GLU 7460.0059

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.