CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602251020031912105

---  normal mode 99  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0623
VAL 2830.0113
GLY 2840.0092
ASN 2850.0016
THR 2860.0015
VAL 2870.0020
LEU 2880.0029
HIS 2890.0016
ALA 2900.0039
LEU 2910.0053
VAL 2920.0038
GLU 2930.0042
VAL 2940.0063
ALA 2950.0050
ASP 2960.0071
ASN 2970.0103
THR 2980.0262
VAL 2990.0118
ASP 3000.0119
ASN 3010.0023
THR 3020.0105
LYS 3030.0160
PHE 3040.0057
VAL 3050.0050
THR 3060.0066
SER 3070.0049
MET 3080.0070
TYR 3090.0058
ASN 3100.0085
GLU 3110.0130
ILE 3120.0104
LEU 3130.0029
ILE 3140.0073
LEU 3150.0094
GLY 3160.0041
ALA 3170.0040
LYS 3180.0036
LEU 3190.0083
HIS 3200.0057
PRO 3210.0085
THR 3220.0151
LEU 3230.0027
LYS 3240.0102
LEU 3250.0095
GLU 3260.0096
GLU 3270.0133
ILE 3280.0112
THR 3290.0084
ASN 3300.0079
ARG 3310.0091
LYS 3320.0093
GLY 3330.0151
LEU 3340.0053
THR 3350.0054
PRO 3360.0054
LEU 3370.0012
ALA 3380.0016
LEU 3390.0029
ALA 3400.0044
ALA 3410.0034
SER 3420.0055
SER 3430.0079
GLY 3440.0085
LYS 3450.0074
ILE 3460.0063
GLY 3470.0044
VAL 3480.0028
LEU 3490.0037
ALA 3500.0055
TYR 3510.0045
ILE 3520.0035
LEU 3530.0050
GLN 3540.0062
ARG 3550.0031
GLU 3560.0013
ILE 3570.0031
HIS 3580.0109
GLU 3590.0099
PRO 3600.0251
GLU 3610.0081
CYS 3620.0064
ARG 3630.0063
HIS 3640.0065
LEU 3650.0052
SER 3660.0031
ARG 3670.0025
LYS 3680.0032
PHE 3690.0031
THR 3700.0044
GLU 3710.0054
TRP 3720.0055
ALA 3730.0071
TYR 3740.0084
GLY 3750.0124
PRO 3760.0116
VAL 3770.0096
HIS 3780.0072
SER 3790.0028
SER 3800.0029
LEU 3810.0036
TYR 3820.0074
ASP 3830.0082
LEU 3840.0094
SER 3850.0119
CYS 3860.0119
ILE 3870.0127
ASP 3880.0190
THR 3890.0197
CYS 3900.0170
GLU 3910.0350
LYS 3920.0257
ASN 3930.0159
SER 3940.0114
VAL 3950.0084
LEU 3960.0085
GLU 3970.0100
VAL 3980.0063
ILE 3990.0032
ALA 4000.0067
TYR 4010.0055
SER 4020.0106
SER 4030.0158
SER 4040.0199
GLU 4050.0235
THR 4060.0110
PRO 4070.0118
ASN 4080.0100
ARG 4090.0056
HIS 4100.0039
ASP 4110.0075
MET 4120.0059
LEU 4130.0072
LEU 4140.0106
VAL 4150.0093
GLU 4160.0090
PRO 4170.0090
LEU 4180.0108
ASN 4190.0099
ARG 4200.0087
LEU 4210.0097
LEU 4220.0097
GLN 4230.0111
ASP 4240.0135
LYS 4250.0122
TRP 4260.0106
ASP 4270.0143
ARG 4280.0126
PHE 4290.0103
VAL 4300.0100
LYS 4310.0083
ARG 4320.0087
ILE 4330.0069
PHE 4340.0060
TYR 4350.0047
PHE 4360.0013
ASN 4370.0041
PHE 4380.0019
PHE 4390.0033
VAL 4400.0045
TYR 4410.0022
CYS 4420.0026
LEU 4430.0040
TYR 4440.0042
MET 4450.0030
ILE 4460.0015
ILE 4470.0030
PHE 4480.0059
THR 4490.0056
ALA 4500.0055
ALA 4510.0080
ALA 4520.0065
TYR 4530.0084
TYR 4540.0067
ARG 4550.0055
PRO 4560.0078
VAL 4570.0278
GLU 4580.0081
GLY 4590.0170
LEU 4600.0150
PRO 4610.0067
PRO 4620.0051
TYR 4630.0113
LYS 4640.0158
LEU 4650.0077
LYS 4660.0068
ASN 4670.0140
THR 4680.0153
VAL 4690.0044
GLY 4700.0077
ASP 4710.0064
TYR 4720.0056
PHE 4730.0115
ARG 4740.0102
VAL 4750.0033
THR 4760.0045
GLY 4770.0022
GLU 4780.0049
ILE 4790.0083
LEU 4800.0083
SER 4810.0065
VAL 4820.0088
SER 4830.0094
GLY 4840.0058
GLY 4850.0056
VAL 4860.0056
TYR 4870.0041
PHE 4880.0016
PHE 4890.0028
PHE 4900.0028
ARG 4910.0042
GLY 4920.0045
ILE 4930.0042
GLN 4940.0042
TYR 4950.0045
PHE 4960.0028
LEU 4970.0040
GLN 4980.0075
ARG 4990.0038
ARG 5000.0106
PRO 5010.0101
SER 5020.0232
LEU 5030.0054
LYS 5040.0064
SER 5050.0131
LEU 5060.0086
PHE 5070.0117
VAL 5080.0091
ASP 5090.0067
SER 5100.0040
TYR 5110.0085
SER 5120.0073
GLU 5130.0084
ILE 5140.0064
LEU 5150.0060
PHE 5160.0062
PHE 5170.0030
VAL 5180.0023
GLN 5190.0023
SER 5200.0027
LEU 5210.0035
PHE 5220.0029
MET 5230.0055
LEU 5240.0042
VAL 5250.0052
SER 5260.0061
VAL 5270.0036
VAL 5280.0064
LEU 5290.0067
TYR 5300.0026
PHE 5310.0054
SER 5320.0118
GLN 5330.0046
ARG 5340.0102
LYS 5350.0055
GLU 5360.0076
TYR 5370.0048
VAL 5380.0032
ALA 5390.0037
SER 5400.0024
MET 5410.0026
VAL 5420.0045
PHE 5430.0045
SER 5440.0040
LEU 5450.0042
ALA 5460.0038
MET 5470.0031
GLY 5480.0030
TRP 5490.0027
THR 5500.0023
ASN 5510.0022
MET 5520.0020
LEU 5530.0041
TYR 5540.0030
TYR 5550.0025
THR 5560.0067
ARG 5570.0070
GLY 5580.0068
PHE 5590.0069
GLN 5600.0146
GLN 5610.0265
MET 5620.0200
GLY 5630.0160
ILE 5640.0238
TYR 5650.0277
ALA 5660.0074
VAL 5670.0175
MET 5680.0146
ILE 5690.0112
GLU 5700.0168
LYS 5710.0188
MET 5720.0229
ILE 5730.0238
LEU 5740.0181
ARG 5750.0194
ASP 5760.0220
LEU 5770.0241
CYS 5780.0161
ARG 5790.0192
PHE 5800.0064
MET 5810.0056
PHE 5820.0031
VAL 5830.0077
TYR 5840.0099
LEU 5850.0095
VAL 5860.0136
PHE 5870.0143
LEU 5880.0148
PHE 5890.0160
GLY 5900.0155
PHE 5910.0124
SER 5920.0136
THR 5930.0154
ALA 5940.0168
VAL 5950.0121
VAL 5960.0168
THR 5970.0093
LEU 5980.0249
ILE 5990.0278
GLU 6000.0311
ASP 6010.0428
SER 6260.0352
TYR 6270.0131
ASN 6280.0124
SER 6290.0448
LEU 6300.0241
TYR 6310.0413
SER 6320.0194
THR 6330.0143
CYS 6340.0073
LEU 6350.0209
GLU 6360.0265
LEU 6370.0197
PHE 6380.0293
LYS 6390.0331
PHE 6400.0277
THR 6410.0310
ILE 6420.0450
GLY 6430.0535
MET 6440.0623
GLY 6450.0390
ASP 6460.0372
LEU 6470.0155
GLU 6480.0149
PHE 6490.0111
THR 6500.0204
GLU 6510.0271
ASN 6520.0244
TYR 6530.0323
ASP 6540.0339
PHE 6550.0380
LYS 6560.0285
ALA 6570.0264
VAL 6580.0277
PHE 6590.0203
ILE 6600.0173
ILE 6610.0192
LEU 6620.0146
LEU 6630.0128
LEU 6640.0123
ALA 6650.0151
TYR 6660.0118
VAL 6670.0069
ILE 6680.0120
LEU 6690.0130
THR 6700.0118
TYR 6710.0106
ILE 6720.0029
LEU 6730.0061
LEU 6740.0187
LEU 6750.0189
ASN 6760.0258
MET 6770.0452
LEU 6780.0187
ILE 6790.0193
ALA 6800.0246
LEU 6810.0280
MET 6820.0218
GLY 6830.0578
GLU 6840.0489
THR 6850.0121
VAL 6860.0133
ASN 6870.0252
LYS 6880.0310
ILE 6890.0194
ALA 6900.0272
GLN 6910.0338
GLU 6920.0111
SER 6930.0105
LYS 6940.0130
ASN 6950.0050
ILE 6960.0080
TRP 6970.0118
LYS 6980.0078
LEU 6990.0072
GLN 7000.0081
ARG 7010.0078
ALA 7020.0082
ILE 7030.0085
THR 7040.0079
ILE 7050.0079
LEU 7060.0089
ASP 7070.0102
THR 7080.0086
GLU 7090.0110
LYS 7100.0218
SER 7110.0212
PHE 7120.0178
LEU 7130.0239
LYS 7140.0195
CYS 7150.0148
MET 7160.0088
ARG 7170.0095
LYS 7180.0095
ALA 7190.0068
PHE 7200.0050
ARG 7210.0030
SER 7220.0151
GLY 7230.0159
LYS 7240.0144
LEU 7250.0336
LEU 7260.0226
TYR 7380.0150
ARG 7390.0156
TRP 7400.0161
CYS 7410.0113
PHE 7420.0066
ARG 7430.0029
VAL 7440.0053
ASP 7450.0049
GLU 7460.0044

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.