CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  MEMBRANE PROTEIN 19-DEC-21 7T9I  ***

<R2> analysis for 2602251030121934833

---  normal mode 35  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0418
THR 210.0391
MET 220.0211
GLY 230.0291
CYS 240.0168
SER 250.0163
SER 260.0152
PRO 270.0157
PRO 280.0146
CYS 290.0103
GLU 300.0085
CYS 310.0122
HIS 320.0168
GLN 330.0239
GLU 340.0308
GLU 350.0363
ASP 360.0248
PHE 370.0205
ARG 380.0162
VAL 390.0105
THR 400.0088
CYS 410.0089
LYS 420.0112
ASP 430.0139
ILE 440.0131
GLN 450.0130
ARG 460.0128
ILE 470.0119
PRO 480.0148
SER 490.0153
LEU 500.0130
PRO 510.0153
PRO 520.0161
SER 530.0172
THR 540.0136
GLN 550.0147
THR 560.0128
LEU 570.0095
LYS 580.0081
LEU 590.0073
ILE 600.0069
GLU 610.0093
THR 620.0085
HIS 630.0075
LEU 640.0080
ARG 650.0097
THR 660.0088
ILE 670.0092
PRO 680.0121
SER 690.0107
HIS 700.0116
ALA 710.0106
PHE 720.0095
SER 730.0110
ASN 740.0114
LEU 750.0113
PRO 760.0120
ASN 770.0128
ILE 780.0098
SER 790.0099
ARG 800.0097
ILE 810.0070
TYR 820.0052
VAL 830.0042
SER 840.0035
ILE 850.0047
ASP 860.0032
VAL 870.0039
THR 880.0037
LEU 890.0049
GLN 900.0078
GLN 910.0094
LEU 920.0091
GLU 930.0113
SER 940.0124
HIS 950.0114
SER 960.0091
PHE 970.0082
TYR 980.0094
ASN 990.0082
LEU 1000.0077
SER 1010.0070
LYS 1020.0072
VAL 1030.0065
THR 1040.0059
HIS 1050.0045
ILE 1060.0041
GLU 1070.0028
ILE 1080.0045
ARG 1090.0055
ASN 1100.0071
THR 1110.0052
ARG 1120.0070
ASN 1130.0067
LEU 1140.0080
THR 1150.0117
TYR 1160.0125
ILE 1170.0098
ASP 1180.0119
PRO 1190.0127
ASP 1200.0107
ALA 1210.0087
LEU 1220.0066
LYS 1230.0071
GLU 1240.0070
LEU 1250.0054
PRO 1260.0043
LEU 1270.0041
LEU 1280.0034
LYS 1290.0025
PHE 1300.0036
LEU 1310.0041
GLY 1320.0062
ILE 1330.0080
PHE 1340.0099
ASN 1350.0126
THR 1360.0116
GLY 1370.0136
LEU 1380.0139
LYS 1390.0169
MET 1400.0155
PHE 1410.0115
PRO 1420.0082
ASP 1430.0072
LEU 1440.0044
THR 1450.0057
LYS 1460.0048
VAL 1470.0032
TYR 1480.0033
SER 1490.0026
THR 1500.0034
ASP 1510.0049
ILE 1520.0070
PHE 1530.0067
PHE 1540.0054
ILE 1550.0071
LEU 1560.0068
GLU 1570.0089
ILE 1580.0100
THR 1590.0126
ASP 1600.0155
ASN 1610.0155
PRO 1620.0184
TYR 1630.0187
MET 1640.0159
THR 1650.0134
SER 1660.0108
ILE 1670.0103
PRO 1680.0103
VAL 1690.0108
ASN 1700.0104
ALA 1710.0080
PHE 1720.0068
GLN 1730.0065
GLY 1740.0023
LEU 1750.0027
CYS 1760.0020
ASN 1770.0044
GLU 1780.0062
THR 1790.0074
LEU 1800.0067
THR 1810.0079
LEU 1820.0083
LYS 1830.0095
LEU 1840.0102
TYR 1850.0116
ASN 1860.0141
ASN 1870.0141
GLY 1880.0154
PHE 1890.0117
THR 1900.0105
SER 1910.0096
VAL 1920.0100
GLN 1930.0121
GLY 1940.0135
TYR 1950.0128
ALA 1960.0113
PHE 1970.0100
ASN 1980.0102
GLY 1990.0103
THR 2000.0083
LYS 2010.0079
LEU 2020.0080
ASP 2030.0081
ALA 2040.0076
VAL 2050.0080
TYR 2060.0084
LEU 2070.0082
ASN 2080.0086
LYS 2090.0103
ASN 2100.0108
LYS 2110.0131
TYR 2120.0115
LEU 2130.0083
THR 2140.0090
VAL 2150.0113
ILE 2160.0107
ASP 2170.0135
LYS 2180.0151
ASP 2190.0143
ALA 2200.0126
PHE 2210.0118
GLY 2220.0130
GLY 2230.0129
VAL 2240.0106
TYR 2250.0095
SER 2260.0089
GLY 2270.0087
PRO 2280.0083
SER 2290.0067
LEU 2300.0065
LEU 2310.0068
ASP 2320.0058
VAL 2330.0068
SER 2340.0040
GLN 2350.0041
THR 2360.0062
SER 2370.0066
VAL 2380.0096
THR 2390.0135
ALA 2400.0137
LEU 2410.0123
PRO 2420.0133
SER 2430.0138
LYS 2440.0143
GLY 2450.0123
LEU 2460.0106
GLU 2470.0102
HIS 2480.0082
LEU 2490.0069
LYS 2500.0047
GLU 2510.0055
LEU 2520.0071
ILE 2530.0061
ALA 2540.0078
ARG 2550.0063
ASN 2560.0076
THR 2570.0085
TRP 2580.0126
THR 2590.0136
LEU 2600.0128
LYS 2610.0155
LYS 2620.0143
LEU 2630.0132
PRO 2640.0140
LEU 2650.0136
SER 2660.0135
LEU 2670.0124
SER 2680.0104
PHE 2690.0089
LEU 2700.0062
HIS 2710.0043
LEU 2720.0053
THR 2730.0042
ARG 2740.0062
ALA 2750.0086
ASP 2760.0090
LEU 2770.0109
SER 2780.0125
TYR 2790.0148
PRO 2800.0139
SER 2810.0124
HIS 2820.0131
CYS 2830.0126
CYS 2840.0123
ALA 2850.0122
PHE 2860.0106
LYS 2870.0113
ASN 2880.0112
GLN 2890.0077
LYS 2900.0070
LYS 2910.0080
ILE 2920.0064
ARG 2930.0074
GLY 2940.0148
ILE 2950.0141
LEU 2960.0085
GLU 2970.0085
SER 2980.0119
LEU 2990.0108
MET 3000.0070
CYS 3010.0027
ASN 3020.0036
GLU 3030.0135
SER 3040.0180
SER 3050.0265
ALA 3800.0137
PHE 3810.0090
ASP 3820.0026
SER 3830.0071
HIS 3840.0109
TYR 3850.0119
ASP 3860.0120
TYR 3870.0119
THR 3880.0103
ILE 3890.0096
CYS 3900.0103
GLY 3910.0113
ASP 3920.0121
SER 3930.0130
GLU 3940.0113
ASP 3950.0108
MET 3960.0085
VAL 3970.0100
CYS 3980.0105
THR 3990.0122
PRO 4000.0138
LYS 4010.0140
SER 4020.0129
ASP 4030.0131
GLU 4040.0104
PHE 4050.0074
ASN 4060.0084
PRO 4070.0105
CYS 4080.0112
GLU 4090.0092
ASP 4100.0089
ILE 4110.0081
MET 4120.0093
GLY 4130.0102
TYR 4140.0121
LYS 4150.0129
PHE 4160.0133
LEU 4170.0116
ARG 4180.0109
ILE 4190.0117
VAL 4200.0117
VAL 4210.0098
TRP 4220.0098
PHE 4230.0104
VAL 4240.0081
SER 4250.0070
LEU 4260.0073
LEU 4270.0065
ALA 4280.0046
LEU 4290.0053
LEU 4300.0050
GLY 4310.0033
ASN 4320.0031
VAL 4330.0032
PHE 4340.0024
VAL 4350.0028
LEU 4360.0024
LEU 4370.0030
ILE 4380.0032
LEU 4390.0031
LEU 4400.0035
THR 4410.0037
SER 4420.0040
HIS 4430.0040
TYR 4440.0038
LYS 4450.0033
LEU 4460.0033
ASN 4470.0034
VAL 4480.0044
PRO 4490.0034
ARG 4500.0031
PHE 4510.0042
LEU 4520.0035
MET 4530.0031
CYS 4540.0030
ASN 4550.0021
LEU 4560.0022
ALA 4570.0022
PHE 4580.0024
ALA 4590.0022
ASP 4600.0018
PHE 4610.0037
CYS 4620.0042
MET 4630.0037
GLY 4640.0055
MET 4650.0061
TYR 4660.0060
LEU 4670.0065
LEU 4680.0074
LEU 4690.0072
ILE 4700.0070
ALA 4710.0078
SER 4720.0080
VAL 4730.0072
ASP 4740.0080
LEU 4750.0082
TYR 4760.0074
THR 4770.0075
HIS 4780.0085
SER 4790.0095
GLU 4800.0095
TYR 4810.0094
TYR 4820.0122
ASN 4830.0121
HIS 4840.0116
ALA 4850.0102
ILE 4860.0122
ASP 4870.0112
TRP 4880.0067
GLN 4890.0073
THR 4900.0078
GLY 4910.0062
PRO 4920.0052
GLY 4930.0052
CYS 4940.0058
ASN 4950.0052
THR 4960.0052
ALA 4970.0055
GLY 4980.0053
PHE 4990.0055
PHE 5000.0054
THR 5010.0047
VAL 5020.0044
PHE 5030.0036
ALA 5040.0031
SER 5050.0025
GLU 5060.0029
LEU 5070.0027
SER 5080.0024
VAL 5090.0038
TYR 5100.0039
THR 5110.0039
LEU 5120.0042
THR 5130.0047
VAL 5140.0046
ILE 5150.0044
THR 5160.0052
LEU 5170.0061
GLU 5180.0058
ARG 5190.0050
TRP 5200.0059
TYR 5210.0077
ALA 5220.0072
ILE 5230.0066
THR 5240.0067
PHE 5250.0092
ALA 5260.0080
MET 5270.0132
ARG 5280.0178
LEU 5290.0201
ASP 5300.0243
ARG 5310.0188
LYS 5320.0153
ILE 5330.0093
ARG 5340.0102
LEU 5350.0100
ARG 5360.0111
HIS 5370.0095
ALA 5380.0080
CYS 5390.0077
ALA 5400.0065
ILE 5410.0052
MET 5420.0037
VAL 5430.0042
GLY 5440.0038
GLY 5450.0042
TRP 5460.0035
VAL 5470.0044
CYS 5480.0051
CYS 5490.0040
PHE 5500.0048
LEU 5510.0054
LEU 5520.0043
ALA 5530.0046
LEU 5540.0054
LEU 5550.0045
PRO 5560.0046
LEU 5570.0056
VAL 5580.0061
GLY 5590.0067
ILE 5600.0054
SER 5610.0048
SER 5620.0047
TYR 5630.0045
ALA 5640.0045
LYS 5650.0042
VAL 5660.0062
SER 5670.0068
ILE 5680.0069
CYS 5690.0054
LEU 5700.0054
PRO 5710.0043
MET 5720.0043
ASP 5730.0050
THR 5740.0070
GLU 5750.0088
THR 5760.0086
PRO 5770.0100
LEU 5780.0075
ALA 5790.0064
LEU 5800.0077
ALA 5810.0064
TYR 5820.0049
ILE 5830.0055
VAL 5840.0056
PHE 5850.0041
VAL 5860.0042
LEU 5870.0051
THR 5880.0049
LEU 5890.0048
ASN 5900.0049
ILE 5910.0059
VAL 5920.0061
ALA 5930.0058
PHE 5940.0057
VAL 5950.0064
ILE 5960.0067
VAL 5970.0063
CYS 5980.0069
CYS 5990.0076
CYS 6000.0070
TYR 6010.0063
VAL 6020.0071
LYS 6030.0078
ILE 6040.0064
TYR 6050.0073
ILE 6060.0091
THR 6070.0087
VAL 6080.0078
ARG 6090.0095
ASN 6100.0090
ASP 6190.0051
THR 6200.0076
LYS 6210.0048
ILE 6220.0041
ALA 6230.0068
LYS 6240.0069
ARG 6250.0044
MET 6260.0055
ALA 6270.0066
VAL 6280.0052
LEU 6290.0046
ILE 6300.0055
PHE 6310.0048
THR 6320.0035
ASP 6330.0038
PHE 6340.0040
ILE 6350.0028
CYS 6360.0021
MET 6370.0042
ALA 6380.0044
PRO 6390.0047
ILE 6400.0042
SER 6410.0053
PHE 6420.0088
TYR 6430.0057
ALA 6440.0051
LEU 6450.0107
SER 6460.0162
ALA 6470.0143
ILE 6480.0162
LEU 6490.0372
ASN 6500.0418
LYS 6510.0309
PRO 6520.0152
LEU 6530.0078
ILE 6540.0050
THR 6550.0083
VAL 6560.0079
SER 6570.0101
ASN 6580.0094
SER 6590.0078
LYS 6600.0085
ILE 6610.0083
LEU 6620.0062
LEU 6630.0066
VAL 6640.0072
LEU 6650.0066
PHE 6660.0042
TYR 6670.0033
PRO 6680.0037
LEU 6690.0028
ASN 6700.0020
SER 6710.0025
CYS 6720.0031
ALA 6730.0031
ASN 6740.0026
PRO 6750.0026
PHE 6760.0033
LEU 6770.0031
TYR 6780.0024
ALA 6790.0032
ILE 6800.0036
PHE 6810.0040
THR 6820.0050
LYS 6830.0053
ALA 6840.0047
PHE 6850.0043
GLN 6860.0045
ARG 6870.0047
ASP 6880.0043
VAL 6890.0041
PHE 6900.0043
ILE 6910.0050
LEU 6920.0049
LEU 6930.0045
SER 6940.0048
LYS 6950.0066
PHE 6960.0069
GLY 6970.0054
ILE 6980.0053

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.