CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  MEMBRANE PROTEIN 19-DEC-21 7T9I  ***

<R2> analysis for 2602261113142298260

---  normal mode 52  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0554
THR 210.0102
MET 220.0036
GLY 230.0061
CYS 240.0057
SER 250.0057
SER 260.0058
PRO 270.0036
PRO 280.0029
CYS 290.0032
GLU 300.0045
CYS 310.0051
HIS 320.0066
GLN 330.0083
GLU 340.0093
GLU 350.0083
ASP 360.0035
PHE 370.0027
ARG 380.0027
VAL 390.0014
THR 400.0026
CYS 410.0024
LYS 420.0038
ASP 430.0045
ILE 440.0040
GLN 450.0048
ARG 460.0039
ILE 470.0030
PRO 480.0019
SER 490.0036
LEU 500.0027
PRO 510.0039
PRO 520.0044
SER 530.0028
THR 540.0022
GLN 550.0027
THR 560.0029
LEU 570.0026
LYS 580.0032
LEU 590.0036
ILE 600.0037
GLU 610.0041
THR 620.0042
HIS 630.0042
LEU 640.0043
ARG 650.0050
THR 660.0038
ILE 670.0031
PRO 680.0033
SER 690.0024
HIS 700.0032
ALA 710.0036
PHE 720.0038
SER 730.0049
ASN 740.0041
LEU 750.0047
PRO 760.0064
ASN 770.0054
ILE 780.0047
SER 790.0053
ARG 800.0048
ILE 810.0038
TYR 820.0036
VAL 830.0033
SER 840.0031
ILE 850.0031
ASP 860.0032
VAL 870.0032
THR 880.0040
LEU 890.0038
GLN 900.0038
GLN 910.0037
LEU 920.0029
GLU 930.0029
SER 940.0026
HIS 950.0022
SER 960.0023
PHE 970.0031
TYR 980.0032
ASN 990.0045
LEU 1000.0050
SER 1010.0055
LYS 1020.0060
VAL 1030.0053
THR 1040.0059
HIS 1050.0042
ILE 1060.0032
GLU 1070.0029
ILE 1080.0025
ARG 1090.0031
ASN 1100.0034
THR 1110.0029
ARG 1120.0033
ASN 1130.0037
LEU 1140.0035
THR 1150.0043
TYR 1160.0045
ILE 1170.0026
ASP 1180.0025
PRO 1190.0026
ASP 1200.0014
ALA 1210.0012
LEU 1220.0021
LYS 1230.0029
GLU 1240.0033
LEU 1250.0042
PRO 1260.0041
LEU 1270.0050
LEU 1280.0045
LYS 1290.0036
PHE 1300.0029
LEU 1310.0023
GLY 1320.0025
ILE 1330.0029
PHE 1340.0036
ASN 1350.0048
THR 1360.0045
GLY 1370.0050
LEU 1380.0050
LYS 1390.0058
MET 1400.0051
PHE 1410.0033
PRO 1420.0030
ASP 1430.0028
LEU 1440.0030
THR 1450.0028
LYS 1460.0025
VAL 1470.0030
TYR 1480.0031
SER 1490.0039
THR 1500.0044
ASP 1510.0047
ILE 1520.0049
PHE 1530.0038
PHE 1540.0035
ILE 1550.0028
LEU 1560.0024
GLU 1570.0026
ILE 1580.0031
THR 1590.0044
ASP 1600.0050
ASN 1610.0050
PRO 1620.0060
TYR 1630.0060
MET 1640.0048
THR 1650.0042
SER 1660.0028
ILE 1670.0028
PRO 1680.0045
VAL 1690.0058
ASN 1700.0063
ALA 1710.0049
PHE 1720.0044
GLN 1730.0053
GLY 1740.0037
LEU 1750.0038
CYS 1760.0042
ASN 1770.0053
GLU 1780.0048
THR 1790.0044
LEU 1800.0032
THR 1810.0024
LEU 1820.0021
LYS 1830.0020
LEU 1840.0024
TYR 1850.0033
ASN 1860.0048
ASN 1870.0043
GLY 1880.0038
PHE 1890.0030
THR 1900.0021
SER 1910.0017
VAL 1920.0021
GLN 1930.0035
GLY 1940.0052
TYR 1950.0059
ALA 1960.0046
PHE 1970.0044
ASN 1980.0063
GLY 1990.0069
THR 2000.0054
LYS 2010.0048
LEU 2020.0036
ASP 2030.0028
ALA 2040.0024
VAL 2050.0023
TYR 2060.0031
LEU 2070.0038
ASN 2080.0056
LYS 2090.0062
ASN 2100.0045
LYS 2110.0047
TYR 2120.0037
LEU 2130.0052
THR 2140.0057
VAL 2150.0046
ILE 2160.0036
ASP 2170.0037
LYS 2180.0047
ASP 2190.0053
ALA 2200.0038
PHE 2210.0043
GLY 2220.0063
GLY 2230.0074
VAL 2240.0061
TYR 2250.0076
SER 2260.0059
GLY 2270.0047
PRO 2280.0040
SER 2290.0038
LEU 2300.0037
LEU 2310.0037
ASP 2320.0049
VAL 2330.0057
SER 2340.0072
GLN 2350.0088
THR 2360.0076
SER 2370.0084
VAL 2380.0071
THR 2390.0077
ALA 2400.0065
LEU 2410.0048
PRO 2420.0038
SER 2430.0049
LYS 2440.0050
GLY 2450.0045
LEU 2460.0039
GLU 2470.0044
HIS 2480.0049
LEU 2490.0036
LYS 2500.0037
GLU 2510.0034
LEU 2520.0033
ILE 2530.0045
ALA 2540.0054
ARG 2550.0066
ASN 2560.0082
THR 2570.0077
TRP 2580.0076
THR 2590.0085
LEU 2600.0065
LYS 2610.0046
LYS 2620.0055
LEU 2630.0050
PRO 2640.0034
LEU 2650.0056
SER 2660.0059
LEU 2670.0018
SER 2680.0026
PHE 2690.0031
LEU 2700.0050
HIS 2710.0051
LEU 2720.0033
THR 2730.0034
ARG 2740.0020
ALA 2750.0018
ASP 2760.0018
LEU 2770.0024
SER 2780.0031
TYR 2790.0039
PRO 2800.0067
SER 2810.0094
HIS 2820.0063
CYS 2830.0054
CYS 2840.0080
ALA 2850.0055
PHE 2860.0030
LYS 2870.0041
ASN 2880.0058
GLN 2890.0048
LYS 2900.0068
LYS 2910.0059
ILE 2920.0070
ARG 2930.0075
GLY 2940.0204
ILE 2950.0264
LEU 2960.0187
GLU 2970.0115
SER 2980.0149
LEU 2990.0147
MET 3000.0207
CYS 3010.0206
ASN 3020.0247
GLU 3030.0158
SER 3040.0240
SER 3050.0527
ALA 3800.0102
PHE 3810.0122
ASP 3820.0139
SER 3830.0120
HIS 3840.0199
TYR 3850.0252
ASP 3860.0120
TYR 3870.0104
THR 3880.0137
ILE 3890.0040
CYS 3900.0040
GLY 3910.0029
ASP 3920.0034
SER 3930.0065
GLU 3940.0076
ASP 3950.0063
MET 3960.0038
VAL 3970.0022
CYS 3980.0008
THR 3990.0022
PRO 4000.0037
LYS 4010.0076
SER 4020.0092
ASP 4030.0096
GLU 4040.0104
PHE 4050.0092
ASN 4060.0096
PRO 4070.0121
CYS 4080.0129
GLU 4090.0115
ASP 4100.0116
ILE 4110.0090
MET 4120.0079
GLY 4130.0102
TYR 4140.0095
LYS 4150.0090
PHE 4160.0067
LEU 4170.0053
ARG 4180.0064
ILE 4190.0066
VAL 4200.0038
VAL 4210.0026
TRP 4220.0036
PHE 4230.0040
VAL 4240.0019
SER 4250.0015
LEU 4260.0043
LEU 4270.0050
ALA 4280.0045
LEU 4290.0068
LEU 4300.0091
GLY 4310.0090
ASN 4320.0084
VAL 4330.0111
PHE 4340.0113
VAL 4350.0088
LEU 4360.0098
LEU 4370.0120
ILE 4380.0090
LEU 4390.0062
LEU 4400.0097
THR 4410.0109
SER 4420.0076
HIS 4430.0084
TYR 4440.0053
LYS 4450.0110
LEU 4460.0144
ASN 4470.0172
VAL 4480.0132
PRO 4490.0079
ARG 4500.0057
PHE 4510.0058
LEU 4520.0042
MET 4530.0034
CYS 4540.0046
ASN 4550.0042
LEU 4560.0042
ALA 4570.0047
PHE 4580.0053
ALA 4590.0049
ASP 4600.0044
PHE 4610.0061
CYS 4620.0063
MET 4630.0038
GLY 4640.0030
MET 4650.0039
TYR 4660.0041
LEU 4670.0026
LEU 4680.0012
LEU 4690.0023
ILE 4700.0044
ALA 4710.0045
SER 4720.0048
VAL 4730.0072
ASP 4740.0088
LEU 4750.0097
TYR 4760.0108
THR 4770.0123
HIS 4780.0126
SER 4790.0151
GLU 4800.0140
TYR 4810.0125
TYR 4820.0120
ASN 4830.0111
HIS 4840.0111
ALA 4850.0113
ILE 4860.0106
ASP 4870.0096
TRP 4880.0071
GLN 4890.0079
THR 4900.0076
GLY 4910.0063
PRO 4920.0056
GLY 4930.0056
CYS 4940.0068
ASN 4950.0076
THR 4960.0061
ALA 4970.0062
GLY 4980.0067
PHE 4990.0067
PHE 5000.0055
THR 5010.0049
VAL 5020.0050
PHE 5030.0044
ALA 5040.0039
SER 5050.0037
GLU 5060.0030
LEU 5070.0030
SER 5080.0030
VAL 5090.0041
TYR 5100.0036
THR 5110.0033
LEU 5120.0039
THR 5130.0039
VAL 5140.0047
ILE 5150.0056
THR 5160.0052
LEU 5170.0065
GLU 5180.0084
ARG 5190.0076
TRP 5200.0078
TYR 5210.0110
ALA 5220.0111
ILE 5230.0102
THR 5240.0078
PHE 5250.0081
ALA 5260.0090
MET 5270.0180
ARG 5280.0093
LEU 5290.0164
ASP 5300.0086
ARG 5310.0102
LYS 5320.0148
ILE 5330.0048
ARG 5340.0146
LEU 5350.0227
ARG 5360.0426
HIS 5370.0232
ALA 5380.0099
CYS 5390.0185
ALA 5400.0239
ILE 5410.0179
MET 5420.0056
VAL 5430.0102
GLY 5440.0132
GLY 5450.0060
TRP 5460.0024
VAL 5470.0035
CYS 5480.0037
CYS 5490.0015
PHE 5500.0037
LEU 5510.0044
LEU 5520.0019
ALA 5530.0047
LEU 5540.0076
LEU 5550.0070
PRO 5560.0087
LEU 5570.0115
VAL 5580.0134
GLY 5590.0145
ILE 5600.0090
SER 5610.0093
SER 5620.0109
TYR 5630.0072
ALA 5640.0076
LYS 5650.0076
VAL 5660.0076
SER 5670.0070
ILE 5680.0067
CYS 5690.0056
LEU 5700.0068
PRO 5710.0072
MET 5720.0062
ASP 5730.0080
THR 5740.0120
GLU 5750.0221
THR 5760.0169
PRO 5770.0150
LEU 5780.0050
ALA 5790.0073
LEU 5800.0119
ALA 5810.0090
TYR 5820.0056
ILE 5830.0075
VAL 5840.0127
PHE 5850.0110
VAL 5860.0075
LEU 5870.0079
THR 5880.0085
LEU 5890.0081
ASN 5900.0057
ILE 5910.0064
VAL 5920.0087
ALA 5930.0080
PHE 5940.0067
VAL 5950.0099
ILE 5960.0090
VAL 5970.0058
CYS 5980.0074
CYS 5990.0090
CYS 6000.0068
TYR 6010.0040
VAL 6020.0054
LYS 6030.0054
ILE 6040.0036
TYR 6050.0027
ILE 6060.0029
THR 6070.0035
VAL 6080.0026
ARG 6090.0048
ASN 6100.0069
ASP 6190.0063
THR 6200.0061
LYS 6210.0092
ILE 6220.0041
ALA 6230.0030
LYS 6240.0043
ARG 6250.0048
MET 6260.0027
ALA 6270.0049
VAL 6280.0052
LEU 6290.0022
ILE 6300.0045
PHE 6310.0057
THR 6320.0035
ASP 6330.0033
PHE 6340.0066
ILE 6350.0060
CYS 6360.0047
MET 6370.0059
ALA 6380.0062
PRO 6390.0060
ILE 6400.0062
SER 6410.0036
PHE 6420.0064
TYR 6430.0089
ALA 6440.0086
LEU 6450.0100
SER 6460.0134
ALA 6470.0235
ILE 6480.0264
LEU 6490.0367
ASN 6500.0554
LYS 6510.0468
PRO 6520.0361
LEU 6530.0295
ILE 6540.0235
THR 6550.0100
VAL 6560.0090
SER 6570.0086
ASN 6580.0093
SER 6590.0089
LYS 6600.0083
ILE 6610.0081
LEU 6620.0093
LEU 6630.0074
VAL 6640.0053
LEU 6650.0063
PHE 6660.0070
TYR 6670.0050
PRO 6680.0041
LEU 6690.0036
ASN 6700.0023
SER 6710.0038
CYS 6720.0034
ALA 6730.0042
ASN 6740.0043
PRO 6750.0067
PHE 6760.0070
LEU 6770.0045
TYR 6780.0045
ALA 6790.0059
ILE 6800.0088
PHE 6810.0086
THR 6820.0068
LYS 6830.0085
ALA 6840.0033
PHE 6850.0054
GLN 6860.0086
ARG 6870.0077
ASP 6880.0090
VAL 6890.0088
PHE 6900.0093
ILE 6910.0111
LEU 6920.0074
LEU 6930.0038
SER 6940.0082
LYS 6950.0080
PHE 6960.0200
GLY 6970.0270
ILE 6980.0240

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.