CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  MEMBRANE PROTEIN 19-DEC-21 7T9I  ***

<R2> analysis for 2602261205572311021

---  normal mode 20  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0805
THR 210.0805
MET 220.0492
GLY 230.0298
CYS 240.0155
SER 250.0133
SER 260.0108
PRO 270.0070
PRO 280.0037
CYS 290.0057
GLU 300.0098
CYS 310.0123
HIS 320.0154
GLN 330.0199
GLU 340.0224
GLU 350.0230
ASP 360.0164
PHE 370.0140
ARG 380.0110
VAL 390.0074
THR 400.0061
CYS 410.0025
LYS 420.0037
ASP 430.0045
ILE 440.0040
GLN 450.0064
ARG 460.0060
ILE 470.0036
PRO 480.0055
SER 490.0083
LEU 500.0071
PRO 510.0111
PRO 520.0104
SER 530.0106
THR 540.0073
GLN 550.0069
THR 560.0064
LEU 570.0037
LYS 580.0052
LEU 590.0047
ILE 600.0067
GLU 610.0075
THR 620.0063
HIS 630.0075
LEU 640.0071
ARG 650.0085
THR 660.0074
ILE 670.0061
PRO 680.0063
SER 690.0062
HIS 700.0052
ALA 710.0043
PHE 720.0031
SER 730.0044
ASN 740.0055
LEU 750.0047
PRO 760.0051
ASN 770.0039
ILE 780.0016
SER 790.0037
ARG 800.0052
ILE 810.0048
TYR 820.0062
VAL 830.0066
SER 840.0081
ILE 850.0095
ASP 860.0089
VAL 870.0100
THR 880.0099
LEU 890.0089
GLN 900.0093
GLN 910.0085
LEU 920.0074
GLU 930.0074
SER 940.0075
HIS 950.0064
SER 960.0061
PHE 970.0055
TYR 980.0055
ASN 990.0052
LEU 1000.0043
SER 1010.0047
LYS 1020.0036
VAL 1030.0047
THR 1040.0063
HIS 1050.0067
ILE 1060.0068
GLU 1070.0075
ILE 1080.0077
ARG 1090.0083
ASN 1100.0090
THR 1110.0092
ARG 1120.0105
ASN 1130.0106
LEU 1140.0086
THR 1150.0088
TYR 1160.0085
ILE 1170.0077
ASP 1180.0075
PRO 1190.0077
ASP 1200.0074
ALA 1210.0071
LEU 1220.0068
LYS 1230.0068
GLU 1240.0066
LEU 1250.0065
PRO 1260.0075
LEU 1270.0071
LEU 1280.0073
LYS 1290.0080
PHE 1300.0077
LEU 1310.0075
GLY 1320.0076
ILE 1330.0076
PHE 1340.0077
ASN 1350.0083
THR 1360.0083
GLY 1370.0084
LEU 1380.0071
LYS 1390.0061
MET 1400.0058
PHE 1410.0054
PRO 1420.0063
ASP 1430.0067
LEU 1440.0070
THR 1450.0072
LYS 1460.0070
VAL 1470.0076
TYR 1480.0081
SER 1490.0081
THR 1500.0092
ASP 1510.0090
ILE 1520.0092
PHE 1530.0086
PHE 1540.0080
ILE 1550.0073
LEU 1560.0069
GLU 1570.0068
ILE 1580.0062
THR 1590.0064
ASP 1600.0062
ASN 1610.0058
PRO 1620.0054
TYR 1630.0046
MET 1640.0040
THR 1650.0020
SER 1660.0021
ILE 1670.0022
PRO 1680.0040
VAL 1690.0048
ASN 1700.0054
ALA 1710.0053
PHE 1720.0063
GLN 1730.0074
GLY 1740.0081
LEU 1750.0078
CYS 1760.0084
ASN 1770.0090
GLU 1780.0088
THR 1790.0078
LEU 1800.0069
THR 1810.0066
LEU 1820.0051
LYS 1830.0055
LEU 1840.0043
TYR 1850.0049
ASN 1860.0054
ASN 1870.0037
GLY 1880.0022
PHE 1890.0021
THR 1900.0042
SER 1910.0045
VAL 1920.0034
GLN 1930.0048
GLY 1940.0054
TYR 1950.0045
ALA 1960.0034
PHE 1970.0028
ASN 1980.0044
GLY 1990.0059
THR 2000.0055
LYS 2010.0057
LEU 2020.0050
ASP 2030.0064
ALA 2040.0056
VAL 2050.0043
TYR 2060.0053
LEU 2070.0049
ASN 2080.0071
LYS 2090.0072
ASN 2100.0048
LYS 2110.0050
TYR 2120.0055
LEU 2130.0064
THR 2140.0089
VAL 2150.0079
ILE 2160.0059
ASP 2170.0066
LYS 2180.0072
ASP 2190.0054
ALA 2200.0038
PHE 2210.0023
GLY 2220.0036
GLY 2230.0041
VAL 2240.0030
TYR 2250.0042
SER 2260.0041
GLY 2270.0041
PRO 2280.0041
SER 2290.0062
LEU 2300.0068
LEU 2310.0066
ASP 2320.0080
VAL 2330.0084
SER 2340.0105
GLN 2350.0114
THR 2360.0094
SER 2370.0106
VAL 2380.0100
THR 2390.0121
ALA 2400.0109
LEU 2410.0088
PRO 2420.0069
SER 2430.0065
LYS 2440.0046
GLY 2450.0026
LEU 2460.0046
GLU 2470.0047
HIS 2480.0047
LEU 2490.0064
LYS 2500.0079
GLU 2510.0088
LEU 2520.0091
ILE 2530.0105
ALA 2540.0114
ARG 2550.0133
ASN 2560.0148
THR 2570.0131
TRP 2580.0155
THR 2590.0146
LEU 2600.0132
LYS 2610.0143
LYS 2620.0128
LEU 2630.0115
PRO 2640.0102
LEU 2650.0099
SER 2660.0087
LEU 2670.0077
SER 2680.0082
PHE 2690.0072
LEU 2700.0064
HIS 2710.0070
LEU 2720.0083
THR 2730.0094
ARG 2740.0104
ALA 2750.0108
ASP 2760.0122
LEU 2770.0128
SER 2780.0144
TYR 2790.0136
PRO 2800.0125
SER 2810.0114
HIS 2820.0116
CYS 2830.0111
CYS 2840.0105
ALA 2850.0099
PHE 2860.0095
LYS 2870.0098
ASN 2880.0094
GLN 2890.0080
LYS 2900.0080
LYS 2910.0089
ILE 2920.0081
ARG 2930.0090
GLY 2940.0103
ILE 2950.0128
LEU 2960.0182
GLU 2970.0151
SER 2980.0120
LEU 2990.0178
MET 3000.0224
CYS 3010.0193
ASN 3020.0175
GLU 3030.0266
SER 3040.0297
SER 3050.0319
ALA 3800.0409
PHE 3810.0412
ASP 3820.0307
SER 3830.0143
HIS 3840.0017
TYR 3850.0108
ASP 3860.0145
TYR 3870.0147
THR 3880.0147
ILE 3890.0159
CYS 3900.0154
GLY 3910.0155
ASP 3920.0144
SER 3930.0131
GLU 3940.0109
ASP 3950.0103
MET 3960.0100
VAL 3970.0115
CYS 3980.0112
THR 3990.0125
PRO 4000.0134
LYS 4010.0109
SER 4020.0101
ASP 4030.0095
GLU 4040.0071
PHE 4050.0060
ASN 4060.0070
PRO 4070.0066
CYS 4080.0070
GLU 4090.0048
ASP 4100.0040
ILE 4110.0028
MET 4120.0009
GLY 4130.0015
TYR 4140.0010
LYS 4150.0012
PHE 4160.0033
LEU 4170.0032
ARG 4180.0034
ILE 4190.0052
VAL 4200.0056
VAL 4210.0048
TRP 4220.0060
PHE 4230.0072
VAL 4240.0063
SER 4250.0052
LEU 4260.0061
LEU 4270.0067
ALA 4280.0059
LEU 4290.0056
LEU 4300.0063
GLY 4310.0062
ASN 4320.0061
VAL 4330.0064
PHE 4340.0071
VAL 4350.0064
LEU 4360.0063
LEU 4370.0075
ILE 4380.0070
LEU 4390.0062
LEU 4400.0070
THR 4410.0079
SER 4420.0073
HIS 4430.0076
TYR 4440.0062
LYS 4450.0062
LEU 4460.0064
ASN 4470.0060
VAL 4480.0056
PRO 4490.0047
ARG 4500.0055
PHE 4510.0060
LEU 4520.0057
MET 4530.0056
CYS 4540.0061
ASN 4550.0063
LEU 4560.0061
ALA 4570.0062
PHE 4580.0059
ALA 4590.0059
ASP 4600.0059
PHE 4610.0053
CYS 4620.0050
MET 4630.0052
GLY 4640.0046
MET 4650.0040
TYR 4660.0030
LEU 4670.0032
LEU 4680.0040
LEU 4690.0033
ILE 4700.0028
ALA 4710.0033
SER 4720.0052
VAL 4730.0055
ASP 4740.0042
LEU 4750.0060
TYR 4760.0085
THR 4770.0074
HIS 4780.0059
SER 4790.0070
GLU 4800.0086
TYR 4810.0078
TYR 4820.0098
ASN 4830.0109
HIS 4840.0109
ALA 4850.0100
ILE 4860.0115
ASP 4870.0120
TRP 4880.0080
GLN 4890.0072
THR 4900.0090
GLY 4910.0089
PRO 4920.0075
GLY 4930.0064
CYS 4940.0037
ASN 4950.0034
THR 4960.0036
ALA 4970.0018
GLY 4980.0002
PHE 4990.0011
PHE 5000.0027
THR 5010.0029
VAL 5020.0033
PHE 5030.0047
ALA 5040.0051
SER 5050.0054
GLU 5060.0059
LEU 5070.0060
SER 5080.0062
VAL 5090.0064
TYR 5100.0064
THR 5110.0063
LEU 5120.0060
THR 5130.0057
VAL 5140.0057
ILE 5150.0049
THR 5160.0038
LEU 5170.0040
GLU 5180.0039
ARG 5190.0022
TRP 5200.0012
TYR 5210.0014
ALA 5220.0060
ILE 5230.0074
THR 5240.0063
PHE 5250.0053
ALA 5260.0091
MET 5270.0117
ARG 5280.0077
LEU 5290.0096
ASP 5300.0074
ARG 5310.0043
LYS 5320.0062
ILE 5330.0060
ARG 5340.0072
LEU 5350.0075
ARG 5360.0081
HIS 5370.0067
ALA 5380.0063
CYS 5390.0075
ALA 5400.0076
ILE 5410.0068
MET 5420.0065
VAL 5430.0071
GLY 5440.0069
GLY 5450.0063
TRP 5460.0061
VAL 5470.0060
CYS 5480.0057
CYS 5490.0052
PHE 5500.0040
LEU 5510.0037
LEU 5520.0038
ALA 5530.0027
LEU 5540.0011
LEU 5550.0023
PRO 5560.0023
LEU 5570.0021
VAL 5580.0028
GLY 5590.0044
ILE 5600.0042
SER 5610.0041
SER 5620.0038
TYR 5630.0031
ALA 5640.0048
LYS 5650.0055
VAL 5660.0049
SER 5670.0044
ILE 5680.0021
CYS 5690.0018
LEU 5700.0020
PRO 5710.0032
MET 5720.0044
ASP 5730.0054
THR 5740.0069
GLU 5750.0082
THR 5760.0072
PRO 5770.0077
LEU 5780.0060
ALA 5790.0052
LEU 5800.0066
ALA 5810.0063
TYR 5820.0049
ILE 5830.0051
VAL 5840.0064
PHE 5850.0058
VAL 5860.0053
LEU 5870.0059
THR 5880.0064
LEU 5890.0062
ASN 5900.0060
ILE 5910.0062
VAL 5920.0060
ALA 5930.0062
PHE 5940.0059
VAL 5950.0055
ILE 5960.0062
VAL 5970.0051
CYS 5980.0050
CYS 5990.0074
CYS 6000.0046
TYR 6010.0037
VAL 6020.0105
LYS 6030.0108
ILE 6040.0081
TYR 6050.0153
ILE 6060.0199
THR 6070.0163
VAL 6080.0230
ARG 6090.0305
ASN 6100.0404
ASP 6190.0398
THR 6200.0322
LYS 6210.0290
ILE 6220.0179
ALA 6230.0131
LYS 6240.0099
ARG 6250.0037
MET 6260.0025
ALA 6270.0037
VAL 6280.0039
LEU 6290.0047
ILE 6300.0050
PHE 6310.0060
THR 6320.0065
ASP 6330.0064
PHE 6340.0065
ILE 6350.0069
CYS 6360.0066
MET 6370.0066
ALA 6380.0071
PRO 6390.0071
ILE 6400.0062
SER 6410.0066
PHE 6420.0084
TYR 6430.0074
ALA 6440.0063
LEU 6450.0080
SER 6460.0100
ALA 6470.0086
ILE 6480.0088
LEU 6490.0124
ASN 6500.0129
LYS 6510.0124
PRO 6520.0097
LEU 6530.0091
ILE 6540.0068
THR 6550.0059
VAL 6560.0040
SER 6570.0036
ASN 6580.0043
SER 6590.0036
LYS 6600.0017
ILE 6610.0040
LEU 6620.0048
LEU 6630.0034
VAL 6640.0042
LEU 6650.0058
PHE 6660.0062
TYR 6670.0054
PRO 6680.0055
LEU 6690.0065
ASN 6700.0064
SER 6710.0063
CYS 6720.0064
ALA 6730.0061
ASN 6740.0061
PRO 6750.0061
PHE 6760.0053
LEU 6770.0054
TYR 6780.0054
ALA 6790.0058
ILE 6800.0055
PHE 6810.0051
THR 6820.0050
LYS 6830.0049
ALA 6840.0050
PHE 6850.0054
GLN 6860.0059
ARG 6870.0060
ASP 6880.0065
VAL 6890.0078
PHE 6900.0081
ILE 6910.0088
LEU 6920.0100
LEU 6930.0116
SER 6940.0131
LYS 6950.0157
PHE 6960.0174
GLY 6970.0168
ILE 6980.0141

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.