CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HORMONE 14-JAN-23 8I2H  ***

Normal Mode Analysis for ID 2603021107033082581

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.4843
mode 8 1.28 0.4489
mode 9 1.33 0.5409
mode 10 1.52 0.4434
mode 11 1.63 0.3922
mode 12 1.70 0.3086
mode 13 1.86 0.2836
mode 14 2.00 0.3887
mode 15 2.13 0.1767
mode 16 2.13 0.4957
mode 17 2.20 0.3751
mode 18 2.27 0.3942
mode 19 2.43 0.3779
mode 20 2.51 0.4385
mode 21 2.58 0.3735
mode 22 2.65 0.4900
mode 23 2.68 0.5968
mode 24 2.75 0.1747
mode 25 2.84 0.5278
mode 26 2.91 0.6612
mode 27 2.95 0.6492
mode 28 3.03 0.4953
mode 29 3.08 0.6139
mode 30 3.12 0.3068
mode 31 3.17 0.5287
mode 32 3.27 0.5726
mode 33 3.41 0.4084
mode 34 3.43 0.4188
mode 35 3.54 0.4385
mode 36 3.60 0.5998
mode 37 3.67 0.4046
mode 38 3.71 0.5524
mode 39 3.80 0.4927
mode 40 3.83 0.4693
mode 41 3.85 0.4165
mode 42 3.98 0.4954
mode 43 4.05 0.3496
mode 44 4.06 0.5354
mode 45 4.13 0.5887
mode 46 4.18 0.5313
mode 47 4.22 0.4351
mode 48 4.24 0.5358
mode 49 4.31 0.4164
mode 50 4.43 0.5243
mode 51 4.45 0.4427
mode 52 4.51 0.5894
mode 53 4.54 0.4558
mode 54 4.59 0.4757
mode 55 4.64 0.5708
mode 56 4.68 0.4195
mode 57 4.72 0.4209
mode 58 4.74 0.5534
mode 59 4.79 0.5403
mode 60 4.84 0.4912
mode 61 4.90 0.4224
mode 62 4.93 0.4208
mode 63 4.94 0.4813
mode 64 4.99 0.2745
mode 65 5.05 0.4209
mode 66 5.08 0.5034
mode 67 5.16 0.1818
mode 68 5.17 0.3438
mode 69 5.22 0.2039
mode 70 5.26 0.3188
mode 71 5.32 0.5213
mode 72 5.33 0.5321
mode 73 5.39 0.4862
mode 74 5.43 0.5273
mode 75 5.46 0.5414
mode 76 5.50 0.5875
mode 77 5.55 0.5366
mode 78 5.57 0.4393
mode 79 5.61 0.4362
mode 80 5.67 0.5097
mode 81 5.69 0.4379
mode 82 5.73 0.5628
mode 83 5.76 0.5218
mode 84 5.77 0.3374
mode 85 5.80 0.4654
mode 86 5.87 0.4525
mode 87 5.91 0.5475
mode 88 5.95 0.5632
mode 89 5.97 0.4359
mode 90 6.00 0.4084
mode 91 6.10 0.4884
mode 92 6.14 0.4273
mode 93 6.16 0.4355
mode 94 6.19 0.4069
mode 95 6.24 0.5424
mode 96 6.26 0.5399
mode 97 6.29 0.3076
mode 98 6.33 0.5989
mode 99 6.37 0.4407
mode 100 6.42 0.4787
mode 101 6.44 0.4782
mode 102 6.47 0.4979
mode 103 6.52 0.4990
mode 104 6.56 0.4901
mode 105 6.59 0.4847
mode 106 6.61 0.5206

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.