CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 26-OCT-20 7DCE  ***

<R2> analysis for 2603031115043683922

---  normal mode 29  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0677
GLY 1030.0164
PRO 1040.0137
PRO 1050.0103
ARG 1060.0076
VAL 1070.0042
LYS 1080.0012
ALA 1090.0013
VAL 1100.0018
LYS 1110.0020
SER 1120.0010
SER 1130.0032
GLU 1140.0030
HIS 1150.0026
ILE 1160.0024
ASN 1170.0021
GLU 1180.0030
GLY 1190.0036
GLU 1200.0038
THR 1210.0045
ALA 1220.0039
MET 1230.0047
LEU 1240.0037
VAL 1250.0035
CYS 1260.0029
LYS 1270.0026
SER 1280.0034
GLU 1290.0054
SER 1300.0086
VAL 1310.0119
PRO 1320.0133
PRO 1330.0088
VAL 1340.0086
THR 1350.0109
ASP 1360.0103
TRP 1370.0079
ALA 1380.0072
TRP 1390.0053
TYR 1400.0039
LYS 1410.0030
ILE 1420.0029
THR 1430.0141
ASP 1440.0243
SER 1450.0244
GLU 1460.0134
ASP 1470.0046
LYS 1480.0049
ALA 1490.0051
LEU 1500.0053
MET 1510.0061
GLN 1520.0063
GLY 1530.0064
SER 1540.0062
GLU 1550.0065
SER 1560.0067
ARG 1570.0058
PHE 1580.0056
PHE 1590.0059
VAL 1600.0058
SER 1610.0061
SER 1620.0060
SER 1630.0067
GLN 1640.0061
GLY 1650.0049
ARG 1660.0050
SER 1670.0052
GLU 1680.0050
LEU 1690.0049
HIS 1700.0052
ILE 1710.0050
GLU 1720.0053
ASN 1730.0039
LEU 1740.0032
ASN 1750.0028
MET 1760.0020
GLU 1770.0022
ALA 1780.0023
ASP 1790.0028
PRO 1800.0024
GLY 1810.0024
GLN 1820.0029
TYR 1830.0030
ARG 1840.0037
CYS 1850.0047
GLN 1860.0060
GLY 1870.0074
THR 1880.0104
SER 1890.0128
SER 1900.0165
LYS 1910.0163
GLY 1920.0137
SER 1930.0095
ASP 1940.0076
GLN 1950.0056
ALA 1960.0038
ILE 1970.0025
ILE 1980.0028
THR 1990.0026
LEU 2000.0025
ARG 2010.0023
VAL 2020.0022
ARG 2030.0053
SER 2040.0073
HIS 2050.0096
LEU 2060.0118
ALA 2070.0106
ALA 2080.0124
LEU 2090.0138
TRP 2100.0139
PRO 2110.0129
PHE 2120.0144
LEU 2130.0171
GLY 2140.0164
ILE 2150.0127
VAL 2160.0117
ALA 2170.0131
GLU 2180.0127
VAL 2190.0075
LEU 2200.0074
VAL 2210.0124
LEU 2220.0112
VAL 2230.0119
THR 2240.0219
ILE 2250.0244
ILE 2260.0198
PHE 2270.0268
ILE 2280.0452
TYR 2290.0352
GLU 2300.0362
LYS 2310.0539
ARG 2320.0659
ARG 2330.0677
LYS 2340.0562
GLY 70.0146
ALA 80.0143
LEU 90.0094
LEU 100.0083
ARG 110.0114
ASP 120.0040
LEU 130.0033
VAL 140.0059
LEU 150.0052
GLY 160.0029
VAL 170.0037
LEU 180.0041
GLY 190.0020
THR 200.0019
ALA 210.0038
ALA 220.0026
PHE 230.0017
LEU 240.0017
LEU 250.0024
ASP 260.0023
LEU 270.0046
GLY 280.0064
THR 290.0055
ASP 300.0040
LEU 310.0061
TRP 320.0110
ALA 330.0096
ALA 340.0104
VAL 350.0145
GLN 360.0156
TYR 370.0153
ALA 380.0176
LEU 390.0222
GLY 400.0222
GLY 410.0234
ARG 420.0189
TYR 430.0163
LEU 440.0142
TRP 450.0104
ALA 460.0102
ALA 470.0070
LEU 480.0050
VAL 490.0029
LEU 500.0048
ALA 510.0034
LEU 520.0075
LEU 530.0061
GLY 540.0090
LEU 550.0117
ALA 560.0109
SER 570.0109
VAL 580.0141
ALA 590.0131
LEU 600.0091
GLN 610.0108
LEU 620.0125
PHE 630.0081
SER 640.0059
TRP 650.0111
LEU 660.0106
TRP 670.0071
LEU 680.0098
ARG 690.0128
ALA 700.0092
ASP 710.0069
PRO 720.0100
ALA 730.0099
GLY 740.0090
LEU 750.0110
HIS 760.0146
GLY 770.0282
SER 780.0292
GLN 790.0362
PRO 800.0372
PRO 810.0374
ARG 820.0352
ARG 830.0409
CYS 840.0384
LEU 850.0292
ALA 860.0326
LEU 870.0363
LEU 880.0269
HIS 890.0218
LEU 900.0312
LEU 910.0289
GLN 920.0180
LEU 930.0143
GLY 940.0119
TYR 950.0074
LEU 960.0089
TYR 970.0083
ARG 980.0062
CYS 990.0049
VAL 1000.0079
GLN 1010.0089
GLU 1020.0042
LEU 1030.0061
ARG 1040.0070
GLN 1050.0051
GLY 1060.0039
LEU 1070.0042
LEU 1080.0096
VAL 1090.0110
TRP 1100.0090
GLN 1110.0090
GLN 1120.0260
GLU 1130.0376
GLU 1140.0374
PRO 1150.0304
SER 1160.0312
GLU 1170.0213
PHE 1180.0137
ASP 1190.0125
LEU 1200.0137
ALA 1210.0106
TYR 1220.0037
ALA 1230.0035
ASP 1240.0050
PHE 1250.0040
LEU 1260.0036
ALA 1270.0018
LEU 1280.0028
ASP 1290.0033
ILE 1300.0026
SER 1310.0035
MET 1320.0046
LEU 1330.0046
ARG 1340.0046
LEU 1350.0059
PHE 1360.0065
GLU 1370.0055
THR 1380.0059
PHE 1390.0072
LEU 1400.0072
GLU 1410.0063
THR 1420.0052
ALA 1430.0062
PRO 1440.0055
GLN 1450.0044
LEU 1460.0051
THR 1470.0040
LEU 1480.0035
VAL 1490.0039
LEU 1500.0045
ALA 1510.0042
ILE 1520.0071
MET 1530.0078
LEU 1540.0077
GLN 1550.0075
SER 1560.0083
GLY 1570.0106
ARG 1580.0112
ALA 1590.0105
GLU 1600.0107
TYR 1610.0105
TYR 1620.0081
GLN 1630.0075
TRP 1640.0077
VAL 1650.0059
GLY 1660.0050
ILE 1670.0048
CYS 1680.0053
THR 1690.0044
SER 1700.0047
PHE 1710.0058
LEU 1720.0050
GLY 1730.0047
ILE 1740.0061
SER 1750.0061
TRP 1760.0050
ALA 1770.0056
LEU 1780.0057
LEU 1790.0056
ASP 1800.0055
TYR 1810.0056
HIS 1820.0051
ARG 1830.0056
ALA 1840.0057
LEU 1850.0054
ARG 1860.0056
THR 1870.0068
CYS 1880.0070
LEU 1890.0072
PRO 1900.0076
SER 1910.0069
LYS 1920.0069
PRO 1930.0064
LEU 1940.0096
LEU 1950.0090
GLY 1960.0079
LEU 1970.0073
GLY 1980.0066
SER 1990.0053
SER 2000.0057
VAL 2010.0059
ILE 2020.0053
TYR 2030.0048
PHE 2040.0053
LEU 2050.0051
TRP 2060.0041
ASN 2070.0043
LEU 2080.0049
LEU 2090.0045
LEU 2100.0038
LEU 2110.0044
TRP 2120.0052
PRO 2130.0057
ARG 2140.0056
VAL 2150.0048
LEU 2160.0049
ALA 2170.0066
VAL 2180.0051
ALA 2190.0040
LEU 2200.0051
PHE 2210.0051
SER 2220.0034
ALA 2230.0026
LEU 2240.0043
PHE 2250.0050
PRO 2260.0036
SER 2270.0076
TYR 2280.0076
VAL 2290.0048
ALA 2300.0052
LEU 2310.0078
HIS 2320.0066
PHE 2330.0065
LEU 2340.0065
GLY 2350.0058
LEU 2360.0057
TRP 2370.0065
LEU 2380.0075
VAL 2390.0062
LEU 2400.0057
LEU 2410.0080
LEU 2420.0144
TRP 2430.0114
VAL 2440.0112
TRP 2450.0158
LEU 2460.0163
GLN 2470.0069
GLY 2480.0065
THR 2490.0067
ASP 2500.0073
PHE 2510.0068
MET 2520.0029
PRO 2530.0028
ASP 2540.0034
PRO 2550.0045
SER 2560.0048
SER 2570.0031
GLU 2580.0039
TRP 2590.0046
LEU 2600.0041
TYR 2610.0044
ARG 2620.0065
VAL 2630.0073
THR 2640.0071
VAL 2650.0053
ALA 2660.0050
THR 2670.0060
ILE 2680.0058
LEU 2690.0048
TYR 2700.0053
PHE 2710.0059
SER 2720.0054
TRP 2730.0045
PHE 2740.0044
ASN 2750.0039
VAL 2760.0047
ALA 2770.0079
GLU 2780.0083
GLY 2790.0069
ARG 2800.0099
THR 2810.0093
ARG 2820.0109
GLY 2830.0126
ARG 2840.0099
ALA 2850.0087
ILE 2860.0125
ILE 2870.0088
HIS 2880.0064
PHE 2890.0086
ALA 2900.0088
PHE 2910.0060
LEU 2920.0060
LEU 2930.0073
SER 2940.0065
ASP 2950.0066
SER 2960.0082
ILE 2970.0104
LEU 2980.0102
LEU 2990.0084
VAL 3000.0092
ALA 3010.0107
THR 3020.0093
TRP 3030.0076
VAL 3040.0100
THR 3050.0097
HIS 3060.0068
SER 3070.0067
SER 3080.0054
TRP 3090.0036
LEU 3100.0063
PRO 3110.0093
SER 3120.0086
GLY 3130.0095
ILE 3140.0102
PRO 3150.0115
LEU 3160.0103
GLN 3170.0127
LEU 3180.0132
TRP 3190.0108
LEU 3200.0107
PRO 3210.0131
VAL 3220.0072
GLY 3230.0060
CYS 3240.0061
GLY 3250.0051
CYS 3260.0039
PHE 3270.0024
PHE 3280.0016
LEU 3290.0033
GLY 3300.0039
LEU 3310.0028
ALA 3320.0046
LEU 3330.0049
ARG 3340.0041
LEU 3350.0043
VAL 3360.0053
TYR 3370.0047
TYR 3380.0038
HIS 3390.0047
TRP 3400.0051
LEU 3410.0047
HIS 3420.0037
PRO 3430.0040
SER 3440.0049
CYS 3450.0059
LEU 3680.0041
PRO 3690.0033
GLN 3700.0028
ASN 3710.0024
ARG 3720.0031
ARG 3730.0046
MET 3740.0048
THR 3750.0057
HIS 3760.0060
LEU 3770.0059
ALA 3780.0061
GLN 3790.0062
LYS 3800.0057
PHE 3810.0047
PHE 3820.0047
PRO 3830.0051
SER 20.0104
VAL 30.0083
GLU 40.0070
GLU 50.0048
SER 60.0041
GLY 70.0079
GLY 80.0058
ARG 90.0074
LEU 100.0097
VAL 110.0126
THR 120.0174
PRO 130.0167
GLY 140.0166
THR 150.0163
PRO 160.0136
LEU 170.0079
THR 180.0068
LEU 190.0043
THR 200.0060
CYS 210.0067
THR 220.0078
VAL 230.0086
SER 240.0108
GLY 250.0120
PHE 260.0106
SER 270.0082
LEU 280.0069
SER 290.0066
ASP 300.0069
TYR 310.0065
ALA 320.0062
MET 330.0056
ASN 340.0049
TRP 350.0040
VAL 360.0045
ARG 370.0043
GLN 380.0056
ALA 390.0056
PRO 400.0062
GLY 410.0084
LYS 420.0064
GLY 430.0068
LEU 440.0062
GLU 450.0051
TRP 460.0050
ILE 470.0035
GLY 480.0036
ILE 490.0045
ILE 500.0048
TYR 510.0057
ALA 520.0060
SER 530.0060
GLY 540.0050
SER 550.0045
ARG 560.0037
TYR 570.0042
TYR 580.0032
ALA 590.0035
SER 600.0033
TRP 610.0031
ALA 620.0021
LYS 630.0010
GLY 640.0029
ARG 650.0032
PHE 660.0027
THR 670.0033
ILE 680.0037
SER 690.0052
LYS 700.0063
THR 710.0077
SER 720.0096
THR 730.0089
THR 740.0074
VAL 750.0062
ASP 760.0054
LEU 770.0048
LYS 780.0064
ILE 790.0064
THR 800.0098
SER 810.0113
PRO 820.0107
THR 830.0129
THR 840.0142
GLU 850.0127
ASP 860.0090
THR 870.0060
ALA 880.0049
THR 890.0039
TYR 900.0031
PHE 910.0054
CYS 920.0056
ALA 930.0059
ARG 940.0061
TYR 950.0057
TYR 960.0061
ALA 970.0048
GLY 980.0049
SER 990.0053
ASP 1000.0062
ILE 1010.0065
TRP 1020.0068
GLY 1030.0061
PRO 1040.0061
GLY 1050.0042
THR 1060.0028
LEU 1070.0035
VAL 1080.0051
THR 1090.0083
VAL 1100.0118
SER 1110.0153
SER 1120.0214
ALA 1130.0199
SER 1140.0192
THR 1150.0154
LYS 1160.0149
GLY 1170.0125
PRO 1180.0092
SER 1190.0085
VAL 1200.0055
PHE 1210.0071
PRO 1220.0074
LEU 1230.0075
ALA 1240.0096
PRO 1250.0098
SER 1260.0118
SER 1270.0363
GLY 1330.0202
THR 1340.0154
ALA 1350.0131
ALA 1360.0081
LEU 1370.0065
GLY 1380.0048
CYS 1390.0046
LEU 1400.0052
VAL 1410.0049
LYS 1420.0059
ASP 1430.0092
TYR 1440.0081
PHE 1450.0088
PRO 1460.0079
GLU 1470.0055
PRO 1480.0080
VAL 1490.0066
THR 1500.0073
VAL 1510.0046
SER 1520.0061
TRP 1530.0056
ASN 1540.0071
SER 1550.0085
GLY 1560.0112
ALA 1570.0133
LEU 1580.0116
THR 1590.0109
SER 1600.0127
GLY 1610.0100
VAL 1620.0054
HIS 1630.0039
THR 1640.0036
PHE 1650.0040
PRO 1660.0038
ALA 1670.0041
VAL 1680.0060
LEU 1690.0070
GLN 1700.0095
SER 1710.0128
SER 1720.0125
GLY 1730.0114
LEU 1740.0091
TYR 1750.0065
SER 1760.0060
LEU 1770.0053
SER 1780.0044
SER 1790.0026
VAL 1800.0045
VAL 1810.0061
THR 1820.0086
VAL 1830.0143
PRO 1840.0214
SER 1850.0239
SER 1860.0296
SER 1870.0247
LEU 1880.0202
GLY 1890.0248
THR 1900.0245
GLN 1910.0184
THR 1920.0128
TYR 1930.0078
ILE 1940.0035
CYS 1950.0019
ASN 1960.0046
VAL 1970.0066
ASN 1980.0114
HIS 1990.0119
LYS 2000.0164
PRO 2010.0164
SER 2020.0181
ASN 2030.0212
THR 2040.0169
LYS 2050.0136
VAL 2060.0096
ASP 2070.0054
LYS 2080.0053
LYS 2090.0061
VAL 2100.0087
GLU 2110.0128
PRO 2120.0163
LYS 2130.0150
SER 2140.0198
ALA 10.0085
ASP 20.0082
VAL 30.0069
VAL 40.0080
MET 50.0074
THR 60.0096
GLN 70.0090
THR 80.0113
PRO 90.0126
SER 100.0127
SER 110.0130
VAL 120.0126
SER 130.0122
ALA 140.0130
ALA 150.0131
VAL 160.0118
GLY 170.0149
GLY 180.0156
THR 190.0146
VAL 200.0128
THR 210.0106
ILE 220.0097
ASN 230.0094
CYS 240.0081
GLN 250.0083
ALA 260.0069
SER 270.0074
GLN 280.0059
SER 290.0044
ILE 300.0041
SER 310.0045
ALA 320.0034
TYR 330.0035
LEU 340.0040
ALA 350.0035
TRP 360.0033
TYR 370.0031
GLN 380.0028
GLN 390.0048
LYS 400.0049
PRO 410.0085
GLY 420.0093
GLN 430.0082
PRO 440.0070
PRO 450.0058
LYS 460.0042
LEU 470.0033
LEU 480.0017
ILE 490.0022
TYR 500.0023
ASP 510.0026
ALA 520.0045
SER 530.0045
ASP 540.0030
LEU 550.0036
ALA 560.0038
SER 570.0075
GLY 580.0091
VAL 590.0066
SER 600.0088
SER 610.0099
ARG 620.0095
PHE 630.0064
LYS 640.0077
GLY 650.0068
SER 660.0068
GLY 670.0065
SER 680.0057
GLY 690.0057
THR 700.0065
GLN 710.0082
PHE 720.0072
THR 730.0081
LEU 740.0072
THR 750.0085
ILE 760.0094
SER 770.0127
ALA 780.0136
LEU 790.0100
GLU 800.0090
CYS 810.0050
ALA 820.0043
ASP 830.0030
ALA 840.0016
ALA 850.0028
THR 860.0049
TYR 870.0041
TYR 880.0049
CYS 890.0045
GLN 900.0048
SER 910.0054
TYR 920.0052
TYR 930.0050
ALA 940.0055
ILE 950.0061
ILE 960.0065
THR 970.0067
TYR 980.0066
GLY 990.0064
ALA 1000.0060
ALA 1010.0066
PHE 1020.0062
GLY 1030.0063
GLY 1040.0080
GLY 1050.0072
THR 1060.0084
GLU 1070.0074
VAL 1080.0060
VAL 1090.0066
VAL 1100.0068
LYS 1110.0084
ARG 1120.0052
THR 1130.0037
VAL 1140.0033
ALA 1150.0054
ALA 1160.0067
PRO 1170.0068
SER 1180.0067
VAL 1190.0073
PHE 1200.0073
ILE 1210.0056
PHE 1220.0062
PRO 1230.0058
PRO 1240.0063
SER 1250.0073
ASP 1260.0085
GLU 1270.0101
GLN 1280.0083
LEU 1290.0061
LYS 1300.0083
SER 1310.0095
GLY 1320.0065
THR 1330.0056
ALA 1340.0024
SER 1350.0040
VAL 1360.0035
VAL 1370.0045
CYS 1380.0052
LEU 1390.0062
LEU 1400.0071
ASN 1410.0065
ASN 1420.0048
PHE 1430.0057
TYR 1440.0055
PRO 1450.0066
ARG 1460.0070
GLU 1470.0075
ALA 1480.0071
LYS 1490.0068
VAL 1500.0059
GLN 1510.0020
TRP 1520.0030
LYS 1530.0093
VAL 1540.0145
ASP 1550.0207
ASN 1560.0191
ALA 1570.0177
LEU 1580.0120
GLN 1590.0116
SER 1600.0139
GLY 1610.0078
ASN 1620.0064
SER 1630.0039
GLN 1640.0065
GLU 1650.0081
SER 1660.0068
VAL 1670.0056
THR 1680.0044
GLU 1690.0032
GLN 1700.0025
ASP 1710.0034
SER 1720.0041
LYS 1730.0055
ASP 1740.0042
CYS 1750.0028
THR 1760.0041
TYR 1770.0048
SER 1780.0055
LEU 1790.0064
SER 1800.0072
SER 1810.0063
THR 1820.0050
LEU 1830.0021
THR 1840.0051
LEU 1850.0071
SER 1860.0135
LYS 1870.0110
ALA 1880.0177
ASP 1890.0187
TYR 1900.0133
GLU 1910.0197
LYS 1920.0248
HIS 1930.0227
LYS 1940.0232
VAL 1950.0201
TYR 1960.0113
ALA 1970.0087
CYS 1980.0052
GLU 1990.0049
VAL 2000.0079
THR 2010.0089
HIS 2020.0092
GLN 2030.0107
GLY 2040.0101
LEU 2050.0105
SER 2060.0178
SER 2070.0141
PRO 2080.0101
VAL 2090.0107
THR 2100.0091
LYS 2110.0108
SER 2120.0122
PHE 2130.0166
ASN 2140.0207
ARG 2150.0206
GLY 2160.0273
GLU 2170.0346

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.