CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 26-OCT-20 7DCE  ***

<R2> analysis for 2603031115043683922

---  normal mode 32  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0819
GLY 1030.0649
PRO 1040.0528
PRO 1050.0392
ARG 1060.0327
VAL 1070.0170
LYS 1080.0080
ALA 1090.0039
VAL 1100.0055
LYS 1110.0026
SER 1120.0026
SER 1130.0028
GLU 1140.0031
HIS 1150.0051
ILE 1160.0064
ASN 1170.0088
GLU 1180.0109
GLY 1190.0125
GLU 1200.0098
THR 1210.0080
ALA 1220.0045
MET 1230.0070
LEU 1240.0047
VAL 1250.0052
CYS 1260.0049
LYS 1270.0073
SER 1280.0184
GLU 1290.0358
SER 1300.0442
VAL 1310.0561
PRO 1320.0522
PRO 1330.0294
VAL 1340.0203
THR 1350.0179
ASP 1360.0083
TRP 1370.0019
ALA 1380.0016
TRP 1390.0008
TYR 1400.0016
LYS 1410.0023
ILE 1420.0032
THR 1430.0437
ASP 1440.0742
SER 1450.0786
GLU 1460.0481
ASP 1470.0177
LYS 1480.0011
ALA 1490.0025
LEU 1500.0034
MET 1510.0055
GLN 1520.0070
GLY 1530.0129
SER 1540.0109
GLU 1550.0143
SER 1560.0160
ARG 1570.0132
PHE 1580.0081
PHE 1590.0082
VAL 1600.0074
SER 1610.0083
SER 1620.0080
SER 1630.0122
GLN 1640.0128
GLY 1650.0104
ARG 1660.0090
SER 1670.0075
GLU 1680.0061
LEU 1690.0055
HIS 1700.0071
ILE 1710.0075
GLU 1720.0095
ASN 1730.0145
LEU 1740.0119
ASN 1750.0151
MET 1760.0163
GLU 1770.0183
ALA 1780.0127
ASP 1790.0101
PRO 1800.0103
GLY 1810.0093
GLN 1820.0072
TYR 1830.0055
ARG 1840.0059
CYS 1850.0056
GLN 1860.0086
GLY 1870.0104
THR 1880.0202
SER 1890.0315
SER 1900.0413
LYS 1910.0517
GLY 1920.0442
SER 1930.0282
ASP 1940.0234
GLN 1950.0173
ALA 1960.0111
ILE 1970.0093
ILE 1980.0035
THR 1990.0057
LEU 2000.0062
ARG 2010.0087
VAL 2020.0103
ARG 2030.0104
SER 2040.0121
HIS 2050.0102
LEU 2060.0102
ALA 2070.0073
ALA 2080.0026
LEU 2090.0010
TRP 2100.0033
PRO 2110.0045
PHE 2120.0057
LEU 2130.0072
GLY 2140.0068
ILE 2150.0071
VAL 2160.0084
ALA 2170.0088
GLU 2180.0073
VAL 2190.0063
LEU 2200.0069
VAL 2210.0066
LEU 2220.0049
VAL 2230.0041
THR 2240.0058
ILE 2250.0067
ILE 2260.0039
PHE 2270.0042
ILE 2280.0108
TYR 2290.0084
GLU 2300.0081
LYS 2310.0123
ARG 2320.0165
ARG 2330.0181
LYS 2340.0153
GLY 70.0043
ALA 80.0034
LEU 90.0024
LEU 100.0030
ARG 110.0027
ASP 120.0016
LEU 130.0016
VAL 140.0018
LEU 150.0013
GLY 160.0008
VAL 170.0012
LEU 180.0011
GLY 190.0009
THR 200.0010
ALA 210.0009
ALA 220.0018
PHE 230.0019
LEU 240.0021
LEU 250.0020
ASP 260.0021
LEU 270.0034
GLY 280.0038
THR 290.0033
ASP 300.0029
LEU 310.0035
TRP 320.0050
ALA 330.0039
ALA 340.0037
VAL 350.0053
GLN 360.0059
TYR 370.0054
ALA 380.0063
LEU 390.0083
GLY 400.0084
GLY 410.0088
ARG 420.0074
TYR 430.0063
LEU 440.0058
TRP 450.0035
ALA 460.0033
ALA 470.0032
LEU 480.0028
VAL 490.0017
LEU 500.0017
ALA 510.0021
LEU 520.0020
LEU 530.0019
GLY 540.0018
LEU 550.0019
ALA 560.0020
SER 570.0015
VAL 580.0015
ALA 590.0014
LEU 600.0012
GLN 610.0011
LEU 620.0011
PHE 630.0007
SER 640.0005
TRP 650.0008
LEU 660.0007
TRP 670.0007
LEU 680.0007
ARG 690.0010
ALA 700.0009
ASP 710.0008
PRO 720.0023
ALA 730.0025
GLY 740.0018
LEU 750.0012
HIS 760.0017
GLY 770.0022
SER 780.0018
GLN 790.0019
PRO 800.0016
PRO 810.0023
ARG 820.0021
ARG 830.0020
CYS 840.0013
LEU 850.0012
ALA 860.0018
LEU 870.0018
LEU 880.0013
HIS 890.0015
LEU 900.0021
LEU 910.0020
GLN 920.0019
LEU 930.0015
GLY 940.0013
TYR 950.0011
LEU 960.0009
TYR 970.0001
ARG 980.0001
CYS 990.0003
VAL 1000.0005
GLN 1010.0005
GLU 1020.0004
LEU 1030.0009
ARG 1040.0011
GLN 1050.0007
GLY 1060.0007
LEU 1070.0018
LEU 1080.0014
VAL 1090.0004
TRP 1100.0017
GLN 1110.0019
GLN 1120.0005
GLU 1130.0010
GLU 1140.0022
PRO 1150.0024
SER 1160.0039
GLU 1170.0035
PHE 1180.0031
ASP 1190.0020
LEU 1200.0018
ALA 1210.0020
TYR 1220.0009
ALA 1230.0004
ASP 1240.0007
PHE 1250.0005
LEU 1260.0001
ALA 1270.0004
LEU 1280.0002
ASP 1290.0002
ILE 1300.0004
SER 1310.0005
MET 1320.0007
LEU 1330.0007
ARG 1340.0008
LEU 1350.0010
PHE 1360.0009
GLU 1370.0017
THR 1380.0017
PHE 1390.0016
LEU 1400.0017
GLU 1410.0017
THR 1420.0022
ALA 1430.0022
PRO 1440.0021
GLN 1450.0020
LEU 1460.0020
THR 1470.0021
LEU 1480.0020
VAL 1490.0018
LEU 1500.0015
ALA 1510.0013
ILE 1520.0011
MET 1530.0014
LEU 1540.0013
GLN 1550.0011
SER 1560.0011
GLY 1570.0025
ARG 1580.0028
ALA 1590.0029
GLU 1600.0035
TYR 1610.0040
TYR 1620.0034
GLN 1630.0027
TRP 1640.0027
VAL 1650.0032
GLY 1660.0027
ILE 1670.0022
CYS 1680.0022
THR 1690.0024
SER 1700.0022
PHE 1710.0022
LEU 1720.0018
GLY 1730.0016
ILE 1740.0016
SER 1750.0017
TRP 1760.0014
ALA 1770.0015
LEU 1780.0015
LEU 1790.0016
ASP 1800.0013
TYR 1810.0011
HIS 1820.0014
ARG 1830.0015
ALA 1840.0011
LEU 1850.0013
ARG 1860.0019
THR 1870.0022
CYS 1880.0019
LEU 1890.0027
PRO 1900.0037
SER 1910.0037
LYS 1920.0048
PRO 1930.0048
LEU 1940.0054
LEU 1950.0049
GLY 1960.0038
LEU 1970.0034
GLY 1980.0035
SER 1990.0028
SER 2000.0025
VAL 2010.0031
ILE 2020.0022
TYR 2030.0018
PHE 2040.0020
LEU 2050.0023
TRP 2060.0019
ASN 2070.0015
LEU 2080.0016
LEU 2090.0015
LEU 2100.0014
LEU 2110.0016
TRP 2120.0010
PRO 2130.0007
ARG 2140.0014
VAL 2150.0015
LEU 2160.0009
ALA 2170.0016
VAL 2180.0022
ALA 2190.0016
LEU 2200.0016
PHE 2210.0028
SER 2220.0027
ALA 2230.0020
LEU 2240.0031
PHE 2250.0039
PRO 2260.0037
SER 2270.0050
TYR 2280.0050
VAL 2290.0046
ALA 2300.0051
LEU 2310.0056
HIS 2320.0051
PHE 2330.0045
LEU 2340.0050
GLY 2350.0049
LEU 2360.0039
TRP 2370.0029
LEU 2380.0028
VAL 2390.0024
LEU 2400.0016
LEU 2410.0015
LEU 2420.0004
TRP 2430.0006
VAL 2440.0010
TRP 2450.0016
LEU 2460.0019
GLN 2470.0012
GLY 2480.0012
THR 2490.0012
ASP 2500.0013
PHE 2510.0012
MET 2520.0006
PRO 2530.0007
ASP 2540.0007
PRO 2550.0007
SER 2560.0008
SER 2570.0010
GLU 2580.0007
TRP 2590.0007
LEU 2600.0008
TYR 2610.0007
ARG 2620.0009
VAL 2630.0013
THR 2640.0015
VAL 2650.0009
ALA 2660.0010
THR 2670.0022
ILE 2680.0016
LEU 2690.0012
TYR 2700.0018
PHE 2710.0015
SER 2720.0015
TRP 2730.0009
PHE 2740.0005
ASN 2750.0003
VAL 2760.0005
ALA 2770.0017
GLU 2780.0021
GLY 2790.0021
ARG 2800.0024
THR 2810.0016
ARG 2820.0019
GLY 2830.0026
ARG 2840.0019
ALA 2850.0016
ILE 2860.0028
ILE 2870.0020
HIS 2880.0015
PHE 2890.0022
ALA 2900.0029
PHE 2910.0027
LEU 2920.0023
LEU 2930.0024
SER 2940.0033
ASP 2950.0034
SER 2960.0028
ILE 2970.0034
LEU 2980.0042
LEU 2990.0034
VAL 3000.0028
ALA 3010.0040
THR 3020.0043
TRP 3030.0035
VAL 3040.0042
THR 3050.0050
HIS 3060.0045
SER 3070.0055
SER 3080.0058
TRP 3090.0049
LEU 3100.0035
PRO 3110.0033
SER 3120.0043
GLY 3130.0033
ILE 3140.0032
PRO 3150.0044
LEU 3160.0037
GLN 3170.0056
LEU 3180.0051
TRP 3190.0032
LEU 3200.0033
PRO 3210.0042
VAL 3220.0023
GLY 3230.0017
CYS 3240.0023
GLY 3250.0016
CYS 3260.0007
PHE 3270.0013
PHE 3280.0016
LEU 3290.0014
GLY 3300.0013
LEU 3310.0016
ALA 3320.0019
LEU 3330.0019
ARG 3340.0015
LEU 3350.0016
VAL 3360.0019
TYR 3370.0020
TYR 3380.0015
HIS 3390.0019
TRP 3400.0026
LEU 3410.0026
HIS 3420.0020
PRO 3430.0025
SER 3440.0025
CYS 3450.0029
LEU 3680.0030
PRO 3690.0020
GLN 3700.0015
ASN 3710.0006
ARG 3720.0005
ARG 3730.0007
MET 3740.0008
THR 3750.0011
HIS 3760.0010
LEU 3770.0008
ALA 3780.0015
GLN 3790.0017
LYS 3800.0012
PHE 3810.0008
PHE 3820.0012
PRO 3830.0021
SER 20.0124
VAL 30.0112
GLU 40.0129
GLU 50.0127
SER 60.0150
GLY 70.0132
GLY 80.0115
ARG 90.0127
LEU 100.0122
VAL 110.0113
THR 120.0120
PRO 130.0108
GLY 140.0131
THR 150.0148
PRO 160.0158
LEU 170.0146
THR 180.0136
LEU 190.0128
THR 200.0124
CYS 210.0114
THR 220.0117
VAL 230.0100
SER 240.0126
GLY 250.0132
PHE 260.0100
SER 270.0048
LEU 280.0028
SER 290.0027
ASP 300.0048
TYR 310.0045
ALA 320.0047
MET 330.0045
ASN 340.0041
TRP 350.0055
VAL 360.0061
ARG 370.0093
GLN 380.0106
ALA 390.0115
PRO 400.0128
GLY 410.0133
LYS 420.0112
GLY 430.0095
LEU 440.0081
GLU 450.0064
TRP 460.0047
ILE 470.0051
GLY 480.0034
ILE 490.0030
ILE 500.0030
TYR 510.0045
ALA 520.0055
SER 530.0046
GLY 540.0027
SER 550.0028
ARG 560.0024
TYR 570.0023
TYR 580.0035
ALA 590.0035
SER 600.0057
TRP 610.0071
ALA 620.0075
LYS 630.0082
GLY 640.0102
ARG 650.0105
PHE 660.0097
THR 670.0088
ILE 680.0073
SER 690.0073
LYS 700.0071
THR 710.0077
SER 720.0079
THR 730.0093
THR 740.0097
VAL 750.0088
ASP 760.0100
LEU 770.0113
LYS 780.0127
ILE 790.0124
THR 800.0138
SER 810.0135
PRO 820.0120
THR 830.0111
THR 840.0104
GLU 850.0104
ASP 860.0108
THR 870.0115
ALA 880.0112
THR 890.0111
TYR 900.0101
PHE 910.0099
CYS 920.0055
ALA 930.0039
ARG 940.0042
TYR 950.0032
TYR 960.0056
ALA 970.0073
GLY 980.0046
SER 990.0051
ASP 1000.0081
ILE 1010.0096
TRP 1020.0096
GLY 1030.0105
PRO 1040.0131
GLY 1050.0121
THR 1060.0133
LEU 1070.0111
VAL 1080.0110
THR 1090.0108
VAL 1100.0105
SER 1110.0108
SER 1120.0126
ALA 1130.0107
SER 1140.0099
THR 1150.0088
LYS 1160.0074
GLY 1170.0073
PRO 1180.0057
SER 1190.0016
VAL 1200.0017
PHE 1210.0054
PRO 1220.0052
LEU 1230.0101
ALA 1240.0136
PRO 1250.0160
SER 1260.0222
SER 1270.0543
GLY 1330.0311
THR 1340.0233
ALA 1350.0202
ALA 1360.0149
LEU 1370.0083
GLY 1380.0055
CYS 1390.0037
LEU 1400.0064
VAL 1410.0059
LYS 1420.0072
ASP 1430.0065
TYR 1440.0079
PHE 1450.0111
PRO 1460.0146
GLU 1470.0171
PRO 1480.0221
VAL 1490.0169
THR 1500.0191
VAL 1510.0139
SER 1520.0163
TRP 1530.0145
ASN 1540.0219
SER 1550.0296
GLY 1560.0268
ALA 1570.0237
LEU 1580.0116
THR 1590.0145
SER 1600.0134
GLY 1610.0133
VAL 1620.0108
HIS 1630.0081
THR 1640.0083
PHE 1650.0094
PRO 1660.0103
ALA 1670.0104
VAL 1680.0110
LEU 1690.0135
GLN 1700.0133
SER 1710.0164
SER 1720.0144
GLY 1730.0134
LEU 1740.0109
TYR 1750.0117
SER 1760.0102
LEU 1770.0103
SER 1780.0090
SER 1790.0078
VAL 1800.0085
VAL 1810.0078
THR 1820.0100
VAL 1830.0085
PRO 1840.0160
SER 1850.0278
SER 1860.0313
SER 1870.0251
LEU 1880.0285
GLY 1890.0389
THR 1900.0385
GLN 1910.0310
THR 1920.0299
TYR 1930.0153
ILE 1940.0158
CYS 1950.0110
ASN 1960.0172
VAL 1970.0159
ASN 1980.0193
HIS 1990.0178
LYS 2000.0243
PRO 2010.0219
SER 2020.0170
ASN 2030.0259
THR 2040.0208
LYS 2050.0222
VAL 2060.0178
ASP 2070.0181
LYS 2080.0146
LYS 2090.0168
VAL 2100.0135
GLU 2110.0206
PRO 2120.0232
LYS 2130.0353
SER 2140.0819
ALA 10.0054
ASP 20.0042
VAL 30.0045
VAL 40.0044
MET 50.0039
THR 60.0038
GLN 70.0033
THR 80.0038
PRO 90.0044
SER 100.0059
SER 110.0080
VAL 120.0072
SER 130.0085
ALA 140.0080
ALA 150.0092
VAL 160.0083
GLY 170.0059
GLY 180.0045
THR 190.0030
VAL 200.0033
THR 210.0032
ILE 220.0030
ASN 230.0031
CYS 240.0032
GLN 250.0039
ALA 260.0058
SER 270.0061
GLN 280.0066
SER 290.0072
ILE 300.0067
SER 310.0081
ALA 320.0079
TYR 330.0068
LEU 340.0057
ALA 350.0055
TRP 360.0053
TYR 370.0070
GLN 380.0091
GLN 390.0109
LYS 400.0137
PRO 410.0168
GLY 420.0203
GLN 430.0188
PRO 440.0157
PRO 450.0111
LYS 460.0119
LEU 470.0096
LEU 480.0096
ILE 490.0087
TYR 500.0088
ASP 510.0087
ALA 520.0081
SER 530.0113
ASP 540.0124
LEU 550.0130
ALA 560.0156
SER 570.0216
GLY 580.0233
VAL 590.0175
SER 600.0164
SER 610.0130
ARG 620.0097
PHE 630.0085
LYS 640.0084
GLY 650.0074
SER 660.0080
GLY 670.0078
SER 680.0078
GLY 690.0078
THR 700.0067
GLN 710.0059
PHE 720.0051
THR 730.0047
LEU 740.0047
THR 750.0052
ILE 760.0040
SER 770.0039
ALA 780.0056
LEU 790.0070
GLU 800.0101
CYS 810.0091
ALA 820.0094
ASP 830.0083
ALA 840.0092
ALA 850.0096
THR 860.0090
TYR 870.0067
TYR 880.0050
CYS 890.0034
GLN 900.0033
SER 910.0056
TYR 920.0059
TYR 930.0062
ALA 940.0062
ILE 950.0057
ILE 960.0063
THR 970.0058
TYR 980.0051
GLY 990.0052
ALA 1000.0054
ALA 1010.0028
PHE 1020.0038
GLY 1030.0034
GLY 1040.0050
GLY 1050.0058
THR 1060.0064
GLU 1070.0086
VAL 1080.0079
VAL 1090.0098
VAL 1100.0095
LYS 1110.0099
ARG 1120.0094
THR 1130.0083
VAL 1140.0067
ALA 1150.0058
ALA 1160.0047
PRO 1170.0057
SER 1180.0069
VAL 1190.0077
PHE 1200.0106
ILE 1210.0121
PHE 1220.0121
PRO 1230.0109
PRO 1240.0105
SER 1250.0114
ASP 1260.0108
GLU 1270.0096
GLN 1280.0107
LEU 1290.0138
LYS 1300.0149
SER 1310.0154
GLY 1320.0141
THR 1330.0126
ALA 1340.0111
SER 1350.0101
VAL 1360.0102
VAL 1370.0102
CYS 1380.0081
LEU 1390.0088
LEU 1400.0070
ASN 1410.0064
ASN 1420.0065
PHE 1430.0044
TYR 1440.0062
PRO 1450.0078
ARG 1460.0081
GLU 1470.0090
ALA 1480.0073
LYS 1490.0085
VAL 1500.0069
GLN 1510.0102
TRP 1520.0090
LYS 1530.0155
VAL 1540.0163
ASP 1550.0239
ASN 1560.0264
ALA 1570.0235
LEU 1580.0202
GLN 1590.0147
SER 1600.0157
GLY 1610.0102
ASN 1620.0077
SER 1630.0061
GLN 1640.0067
GLU 1650.0068
SER 1660.0071
VAL 1670.0052
THR 1680.0054
GLU 1690.0067
GLN 1700.0082
ASP 1710.0076
SER 1720.0080
LYS 1730.0091
ASP 1740.0092
CYS 1750.0081
THR 1760.0079
TYR 1770.0068
SER 1780.0063
LEU 1790.0058
SER 1800.0079
SER 1810.0071
THR 1820.0083
LEU 1830.0064
THR 1840.0077
LEU 1850.0068
SER 1860.0093
LYS 1870.0098
ALA 1880.0061
ASP 1890.0049
TYR 1900.0068
GLU 1910.0129
LYS 1920.0132
HIS 1930.0167
LYS 1940.0223
VAL 1950.0230
TYR 1960.0146
ALA 1970.0140
CYS 1980.0089
GLU 1990.0126
VAL 2000.0087
THR 2010.0115
HIS 2020.0090
GLN 2030.0098
GLY 2040.0059
LEU 2050.0093
SER 2060.0225
SER 2070.0246
PRO 2080.0207
VAL 2090.0170
THR 2100.0167
LYS 2110.0132
SER 2120.0166
PHE 2130.0211
ASN 2140.0258
ARG 2150.0241
GLY 2160.0269
GLU 2170.0372

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.