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elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 26-OCT-20 7DCE  ***

<R2> analysis for 2603031115043683922

---  normal mode 52  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0680
GLY 1030.0117
PRO 1040.0094
PRO 1050.0052
ARG 1060.0045
VAL 1070.0067
LYS 1080.0080
ALA 1090.0065
VAL 1100.0077
LYS 1110.0073
SER 1120.0084
SER 1130.0105
GLU 1140.0092
HIS 1150.0090
ILE 1160.0068
ASN 1170.0055
GLU 1180.0037
GLY 1190.0026
GLU 1200.0044
THR 1210.0049
ALA 1220.0063
MET 1230.0054
LEU 1240.0053
VAL 1250.0053
CYS 1260.0051
LYS 1270.0057
SER 1280.0093
GLU 1290.0130
SER 1300.0099
VAL 1310.0160
PRO 1320.0187
PRO 1330.0109
VAL 1340.0075
THR 1350.0092
ASP 1360.0058
TRP 1370.0021
ALA 1380.0066
TRP 1390.0061
TYR 1400.0064
LYS 1410.0061
ILE 1420.0070
THR 1430.0104
ASP 1440.0165
SER 1450.0117
GLU 1460.0124
ASP 1470.0138
LYS 1480.0100
ALA 1490.0094
LEU 1500.0072
MET 1510.0070
GLN 1520.0053
GLY 1530.0049
SER 1540.0052
GLU 1550.0049
SER 1560.0046
ARG 1570.0044
PHE 1580.0036
PHE 1590.0037
VAL 1600.0039
SER 1610.0043
SER 1620.0046
SER 1630.0053
GLN 1640.0055
GLY 1650.0052
ARG 1660.0051
SER 1670.0046
GLU 1680.0045
LEU 1690.0042
HIS 1700.0042
ILE 1710.0041
GLU 1720.0041
ASN 1730.0038
LEU 1740.0050
ASN 1750.0048
MET 1760.0058
GLU 1770.0066
ALA 1780.0066
ASP 1790.0067
PRO 1800.0082
GLY 1810.0089
GLN 1820.0091
TYR 1830.0080
ARG 1840.0076
CYS 1850.0050
GLN 1860.0052
GLY 1870.0039
THR 1880.0066
SER 1890.0119
SER 1900.0195
LYS 1910.0185
GLY 1920.0143
SER 1930.0071
ASP 1940.0058
GLN 1950.0067
ALA 1960.0082
ILE 1970.0111
ILE 1980.0094
THR 1990.0100
LEU 2000.0085
ARG 2010.0090
VAL 2020.0074
ARG 2030.0069
SER 2040.0054
HIS 2050.0077
LEU 2060.0119
ALA 2070.0083
ALA 2080.0088
LEU 2090.0091
TRP 2100.0084
PRO 2110.0071
PHE 2120.0083
LEU 2130.0102
GLY 2140.0088
ILE 2150.0056
VAL 2160.0061
ALA 2170.0093
GLU 2180.0094
VAL 2190.0101
LEU 2200.0108
VAL 2210.0125
LEU 2220.0136
VAL 2230.0138
THR 2240.0147
ILE 2250.0164
ILE 2260.0153
PHE 2270.0139
ILE 2280.0159
TYR 2290.0161
GLU 2300.0103
LYS 2310.0089
ARG 2320.0140
ARG 2330.0199
LYS 2340.0126
GLY 70.0152
ALA 80.0127
LEU 90.0095
LEU 100.0108
ARG 110.0111
ASP 120.0078
LEU 130.0070
VAL 140.0071
LEU 150.0066
GLY 160.0057
VAL 170.0051
LEU 180.0048
GLY 190.0047
THR 200.0044
ALA 210.0040
ALA 220.0045
PHE 230.0041
LEU 240.0043
LEU 250.0052
ASP 260.0052
LEU 270.0074
GLY 280.0075
THR 290.0078
ASP 300.0072
LEU 310.0066
TRP 320.0095
ALA 330.0061
ALA 340.0054
VAL 350.0076
GLN 360.0059
TYR 370.0052
ALA 380.0079
LEU 390.0134
GLY 400.0122
GLY 410.0115
ARG 420.0064
TYR 430.0028
LEU 440.0037
TRP 450.0028
ALA 460.0040
ALA 470.0060
LEU 480.0065
VAL 490.0066
LEU 500.0084
ALA 510.0098
LEU 520.0067
LEU 530.0066
GLY 540.0073
LEU 550.0066
ALA 560.0055
SER 570.0047
VAL 580.0045
ALA 590.0038
LEU 600.0034
GLN 610.0038
LEU 620.0041
PHE 630.0043
SER 640.0048
TRP 650.0046
LEU 660.0045
TRP 670.0040
LEU 680.0039
ARG 690.0039
ALA 700.0039
ASP 710.0038
PRO 720.0092
ALA 730.0104
GLY 740.0080
LEU 750.0064
HIS 760.0084
GLY 770.0094
SER 780.0068
GLN 790.0054
PRO 800.0029
PRO 810.0013
ARG 820.0046
ARG 830.0044
CYS 840.0028
LEU 850.0035
ALA 860.0047
LEU 870.0044
LEU 880.0045
HIS 890.0044
LEU 900.0045
LEU 910.0048
GLN 920.0047
LEU 930.0047
GLY 940.0044
TYR 950.0041
LEU 960.0043
TYR 970.0052
ARG 980.0054
CYS 990.0060
VAL 1000.0056
GLN 1010.0052
GLU 1020.0077
LEU 1030.0080
ARG 1040.0077
GLN 1050.0074
GLY 1060.0077
LEU 1070.0112
LEU 1080.0101
VAL 1090.0076
TRP 1100.0083
GLN 1110.0098
GLN 1120.0122
GLU 1130.0119
GLU 1140.0072
PRO 1150.0058
SER 1160.0034
GLU 1170.0060
PHE 1180.0067
ASP 1190.0059
LEU 1200.0049
ALA 1210.0062
TYR 1220.0050
ALA 1230.0051
ASP 1240.0053
PHE 1250.0051
LEU 1260.0052
ALA 1270.0031
LEU 1280.0031
ASP 1290.0032
ILE 1300.0031
SER 1310.0030
MET 1320.0017
LEU 1330.0013
ARG 1340.0013
LEU 1350.0020
PHE 1360.0019
GLU 1370.0015
THR 1380.0015
PHE 1390.0006
LEU 1400.0010
GLU 1410.0017
THR 1420.0024
ALA 1430.0022
PRO 1440.0028
GLN 1450.0032
LEU 1460.0031
THR 1470.0032
LEU 1480.0031
VAL 1490.0031
LEU 1500.0032
ALA 1510.0031
ILE 1520.0027
MET 1530.0031
LEU 1540.0039
GLN 1550.0034
SER 1560.0024
GLY 1570.0035
ARG 1580.0024
ALA 1590.0037
GLU 1600.0038
TYR 1610.0055
TYR 1620.0045
GLN 1630.0045
TRP 1640.0057
VAL 1650.0063
GLY 1660.0059
ILE 1670.0052
CYS 1680.0045
THR 1690.0051
SER 1700.0055
PHE 1710.0048
LEU 1720.0041
GLY 1730.0039
ILE 1740.0039
SER 1750.0040
TRP 1760.0039
ALA 1770.0026
LEU 1780.0025
LEU 1790.0025
ASP 1800.0021
TYR 1810.0018
HIS 1820.0022
ARG 1830.0018
ALA 1840.0020
LEU 1850.0021
ARG 1860.0014
THR 1870.0033
CYS 1880.0033
LEU 1890.0042
PRO 1900.0050
SER 1910.0034
LYS 1920.0046
PRO 1930.0071
LEU 1940.0144
LEU 1950.0123
GLY 1960.0066
LEU 1970.0052
GLY 1980.0046
SER 1990.0030
SER 2000.0027
VAL 2010.0026
ILE 2020.0025
TYR 2030.0023
PHE 2040.0026
LEU 2050.0026
TRP 2060.0022
ASN 2070.0027
LEU 2080.0032
LEU 2090.0030
LEU 2100.0025
LEU 2110.0030
TRP 2120.0040
PRO 2130.0024
ARG 2140.0018
VAL 2150.0035
LEU 2160.0031
ALA 2170.0023
VAL 2180.0023
ALA 2190.0029
LEU 2200.0026
PHE 2210.0021
SER 2220.0029
ALA 2230.0036
LEU 2240.0032
PHE 2250.0036
PRO 2260.0042
SER 2270.0080
TYR 2280.0043
VAL 2290.0039
ALA 2300.0048
LEU 2310.0017
HIS 2320.0043
PHE 2330.0062
LEU 2340.0076
GLY 2350.0071
LEU 2360.0074
TRP 2370.0101
LEU 2380.0105
VAL 2390.0104
LEU 2400.0102
LEU 2410.0107
LEU 2420.0104
TRP 2430.0110
VAL 2440.0106
TRP 2450.0092
LEU 2460.0093
GLN 2470.0065
GLY 2480.0058
THR 2490.0060
ASP 2500.0054
PHE 2510.0059
MET 2520.0052
PRO 2530.0055
ASP 2540.0067
PRO 2550.0067
SER 2560.0080
SER 2570.0069
GLU 2580.0065
TRP 2590.0072
LEU 2600.0075
TYR 2610.0070
ARG 2620.0074
VAL 2630.0079
THR 2640.0077
VAL 2650.0074
ALA 2660.0079
THR 2670.0054
ILE 2680.0051
LEU 2690.0051
TYR 2700.0042
PHE 2710.0037
SER 2720.0059
TRP 2730.0065
PHE 2740.0066
ASN 2750.0071
VAL 2760.0067
ALA 2770.0075
GLU 2780.0076
GLY 2790.0083
ARG 2800.0084
THR 2810.0093
ARG 2820.0070
GLY 2830.0087
ARG 2840.0103
ALA 2850.0099
ILE 2860.0099
ILE 2870.0097
HIS 2880.0095
PHE 2890.0083
ALA 2900.0080
PHE 2910.0085
LEU 2920.0063
LEU 2930.0056
SER 2940.0052
ASP 2950.0047
SER 2960.0044
ILE 2970.0047
LEU 2980.0040
LEU 2990.0030
VAL 3000.0032
ALA 3010.0032
THR 3020.0025
TRP 3030.0028
VAL 3040.0040
THR 3050.0029
HIS 3060.0032
SER 3070.0068
SER 3080.0072
TRP 3090.0055
LEU 3100.0041
PRO 3110.0042
SER 3120.0064
GLY 3130.0061
ILE 3140.0066
PRO 3150.0075
LEU 3160.0073
GLN 3170.0099
LEU 3180.0099
TRP 3190.0083
LEU 3200.0075
PRO 3210.0083
VAL 3220.0070
GLY 3230.0055
CYS 3240.0048
GLY 3250.0047
CYS 3260.0045
PHE 3270.0038
PHE 3280.0035
LEU 3290.0035
GLY 3300.0030
LEU 3310.0022
ALA 3320.0023
LEU 3330.0030
ARG 3340.0018
LEU 3350.0015
VAL 3360.0027
TYR 3370.0023
TYR 3380.0017
HIS 3390.0034
TRP 3400.0037
LEU 3410.0027
HIS 3420.0022
PRO 3430.0026
SER 3440.0037
CYS 3450.0047
LEU 3680.0106
PRO 3690.0080
GLN 3700.0054
ASN 3710.0031
ARG 3720.0031
ARG 3730.0025
MET 3740.0021
THR 3750.0019
HIS 3760.0021
LEU 3770.0020
ALA 3780.0037
GLN 3790.0040
LYS 3800.0041
PHE 3810.0034
PHE 3820.0030
PRO 3830.0062
SER 20.0081
VAL 30.0082
GLU 40.0102
GLU 50.0106
SER 60.0118
GLY 70.0096
GLY 80.0117
ARG 90.0090
LEU 100.0056
VAL 110.0040
THR 120.0132
PRO 130.0160
GLY 140.0175
THR 150.0141
PRO 160.0129
LEU 170.0070
THR 180.0055
LEU 190.0072
THR 200.0063
CYS 210.0084
THR 220.0091
VAL 230.0078
SER 240.0090
GLY 250.0083
PHE 260.0064
SER 270.0062
LEU 280.0049
SER 290.0050
ASP 300.0046
TYR 310.0031
ALA 320.0036
MET 330.0052
ASN 340.0061
TRP 350.0078
VAL 360.0088
ARG 370.0109
GLN 380.0121
ALA 390.0131
PRO 400.0142
GLY 410.0149
LYS 420.0098
GLY 430.0079
LEU 440.0069
GLU 450.0072
TRP 460.0065
ILE 470.0095
GLY 480.0077
ILE 490.0062
ILE 500.0052
TYR 510.0042
ALA 520.0050
SER 530.0037
GLY 540.0042
SER 550.0044
ARG 560.0060
TYR 570.0062
TYR 580.0083
ALA 590.0097
SER 600.0107
TRP 610.0125
ALA 620.0135
LYS 630.0124
GLY 640.0128
ARG 650.0139
PHE 660.0115
THR 670.0096
ILE 680.0079
SER 690.0058
LYS 700.0049
THR 710.0046
SER 720.0059
THR 730.0067
THR 740.0065
VAL 750.0060
ASP 760.0067
LEU 770.0076
LYS 780.0080
ILE 790.0119
THR 800.0141
SER 810.0176
PRO 820.0155
THR 830.0189
THR 840.0191
GLU 850.0218
ASP 860.0178
THR 870.0135
ALA 880.0136
THR 890.0130
TYR 900.0109
PHE 910.0110
CYS 920.0083
ALA 930.0062
ARG 940.0049
TYR 950.0034
TYR 960.0027
ALA 970.0033
GLY 980.0045
SER 990.0044
ASP 1000.0032
ILE 1010.0041
TRP 1020.0074
GLY 1030.0090
PRO 1040.0106
GLY 1050.0117
THR 1060.0135
LEU 1070.0137
VAL 1080.0088
THR 1090.0082
VAL 1100.0086
SER 1110.0103
SER 1120.0204
ALA 1130.0215
SER 1140.0262
THR 1150.0248
LYS 1160.0249
GLY 1170.0168
PRO 1180.0110
SER 1190.0034
VAL 1200.0068
PHE 1210.0109
PRO 1220.0120
LEU 1230.0085
ALA 1240.0090
PRO 1250.0104
SER 1260.0175
SER 1270.0195
GLY 1330.0588
THR 1340.0427
ALA 1350.0302
ALA 1360.0136
LEU 1370.0083
GLY 1380.0096
CYS 1390.0081
LEU 1400.0065
VAL 1410.0058
LYS 1420.0042
ASP 1430.0085
TYR 1440.0094
PHE 1450.0111
PRO 1460.0127
GLU 1470.0149
PRO 1480.0271
VAL 1490.0166
THR 1500.0143
VAL 1510.0127
SER 1520.0163
TRP 1530.0186
ASN 1540.0225
SER 1550.0299
GLY 1560.0292
ALA 1570.0274
LEU 1580.0197
THR 1590.0256
SER 1600.0275
GLY 1610.0226
VAL 1620.0164
HIS 1630.0066
THR 1640.0061
PHE 1650.0070
PRO 1660.0082
ALA 1670.0106
VAL 1680.0126
LEU 1690.0110
GLN 1700.0132
SER 1710.0177
SER 1720.0163
GLY 1730.0085
LEU 1740.0063
TYR 1750.0045
SER 1760.0064
LEU 1770.0097
SER 1780.0107
SER 1790.0080
VAL 1800.0049
VAL 1810.0090
THR 1820.0147
VAL 1830.0309
PRO 1840.0527
SER 1850.0584
SER 1860.0680
SER 1870.0430
LEU 1880.0280
GLY 1890.0325
THR 1900.0196
GLN 1910.0103
THR 1920.0158
TYR 1930.0104
ILE 1940.0122
CYS 1950.0098
ASN 1960.0136
VAL 1970.0107
ASN 1980.0187
HIS 1990.0224
LYS 2000.0354
PRO 2010.0384
SER 2020.0347
ASN 2030.0362
THR 2040.0224
LYS 2050.0112
VAL 2060.0034
ASP 2070.0179
LYS 2080.0155
LYS 2090.0107
VAL 2100.0075
GLU 2110.0090
PRO 2120.0136
LYS 2130.0093
SER 2140.0303
ALA 10.0090
ASP 20.0073
VAL 30.0067
VAL 40.0066
MET 50.0054
THR 60.0079
GLN 70.0071
THR 80.0078
PRO 90.0099
SER 100.0138
SER 110.0140
VAL 120.0127
SER 130.0126
ALA 140.0118
ALA 150.0119
VAL 160.0109
GLY 170.0112
GLY 180.0091
THR 190.0095
VAL 200.0088
THR 210.0078
ILE 220.0060
ASN 230.0026
CYS 240.0030
GLN 250.0047
ALA 260.0065
SER 270.0082
GLN 280.0087
SER 290.0085
ILE 300.0072
SER 310.0080
ALA 320.0060
TYR 330.0034
LEU 340.0017
ALA 350.0021
TRP 360.0071
TYR 370.0087
GLN 380.0114
GLN 390.0124
LYS 400.0154
PRO 410.0197
GLY 420.0164
GLN 430.0143
PRO 440.0099
PRO 450.0090
LYS 460.0155
LEU 470.0126
LEU 480.0128
ILE 490.0106
TYR 500.0092
ASP 510.0059
ALA 520.0073
SER 530.0145
ASP 540.0159
LEU 550.0202
ALA 560.0224
SER 570.0347
GLY 580.0416
VAL 590.0319
SER 600.0333
SER 610.0268
ARG 620.0219
PHE 630.0176
LYS 640.0157
GLY 650.0111
SER 660.0099
GLY 670.0083
SER 680.0082
GLY 690.0097
THR 700.0078
GLN 710.0051
PHE 720.0028
THR 730.0044
LEU 740.0075
THR 750.0108
ILE 760.0118
SER 770.0132
ALA 780.0155
LEU 790.0148
GLU 800.0196
CYS 810.0161
ALA 820.0186
ASP 830.0170
ALA 840.0168
ALA 850.0185
THR 860.0138
TYR 870.0105
TYR 880.0073
CYS 890.0038
GLN 900.0015
SER 910.0033
TYR 920.0033
TYR 930.0044
ALA 940.0049
ILE 950.0043
ILE 960.0041
THR 970.0054
TYR 980.0056
GLY 990.0044
ALA 1000.0037
ALA 1010.0045
PHE 1020.0030
GLY 1030.0057
GLY 1040.0098
GLY 1050.0109
THR 1060.0143
GLU 1070.0153
VAL 1080.0143
VAL 1090.0145
VAL 1100.0138
LYS 1110.0081
ARG 1120.0074
THR 1130.0084
VAL 1140.0096
ALA 1150.0123
ALA 1160.0131
PRO 1170.0101
SER 1180.0063
VAL 1190.0062
PHE 1200.0061
ILE 1210.0063
PHE 1220.0058
PRO 1230.0063
PRO 1240.0078
SER 1250.0100
ASP 1260.0231
GLU 1270.0210
GLN 1280.0169
LEU 1290.0216
LYS 1300.0237
SER 1310.0253
GLY 1320.0252
THR 1330.0197
ALA 1340.0157
SER 1350.0111
VAL 1360.0077
VAL 1370.0072
CYS 1380.0061
LEU 1390.0067
LEU 1400.0060
ASN 1410.0049
ASN 1420.0051
PHE 1430.0049
TYR 1440.0059
PRO 1450.0080
ARG 1460.0111
GLU 1470.0132
ALA 1480.0104
LYS 1490.0110
VAL 1500.0081
GLN 1510.0110
TRP 1520.0113
LYS 1530.0110
VAL 1540.0132
ASP 1550.0141
ASN 1560.0164
ALA 1570.0191
LEU 1580.0192
GLN 1590.0195
SER 1600.0231
GLY 1610.0140
ASN 1620.0149
SER 1630.0102
GLN 1640.0081
GLU 1650.0075
SER 1660.0080
VAL 1670.0083
THR 1680.0095
GLU 1690.0105
GLN 1700.0102
ASP 1710.0115
SER 1720.0152
LYS 1730.0140
ASP 1740.0086
CYS 1750.0061
THR 1760.0067
TYR 1770.0068
SER 1780.0068
LEU 1790.0059
SER 1800.0063
SER 1810.0069
THR 1820.0088
LEU 1830.0100
THR 1840.0140
LEU 1850.0175
SER 1860.0305
LYS 1870.0280
ALA 1880.0265
ASP 1890.0232
TYR 1900.0185
GLU 1910.0173
LYS 1920.0166
HIS 1930.0144
LYS 1940.0104
VAL 1950.0124
TYR 1960.0107
ALA 1970.0096
CYS 1980.0093
GLU 1990.0083
VAL 2000.0087
THR 2010.0170
HIS 2020.0157
GLN 2030.0193
GLY 2040.0171
LEU 2050.0211
SER 2060.0550
SER 2070.0465
PRO 2080.0316
VAL 2090.0184
THR 2100.0075
LYS 2110.0131
SER 2120.0118
PHE 2130.0112
ASN 2140.0142
ARG 2150.0140
GLY 2160.0449
GLU 2170.0625

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.