CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 26-OCT-20 7DCE  ***

<R2> analysis for 2603031115043683922

---  normal mode 64  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0846
GLY 1030.0010
PRO 1040.0011
PRO 1050.0010
ARG 1060.0015
VAL 1070.0014
LYS 1080.0014
ALA 1090.0011
VAL 1100.0008
LYS 1110.0008
SER 1120.0011
SER 1130.0012
GLU 1140.0005
HIS 1150.0002
ILE 1160.0008
ASN 1170.0015
GLU 1180.0021
GLY 1190.0020
GLU 1200.0010
THR 1210.0007
ALA 1220.0006
MET 1230.0004
LEU 1240.0008
VAL 1250.0008
CYS 1260.0011
LYS 1270.0011
SER 1280.0021
GLU 1290.0028
SER 1300.0022
VAL 1310.0026
PRO 1320.0028
PRO 1330.0023
VAL 1340.0019
THR 1350.0024
ASP 1360.0020
TRP 1370.0016
ALA 1380.0028
TRP 1390.0022
TYR 1400.0021
LYS 1410.0032
ILE 1420.0029
THR 1430.0146
ASP 1440.0103
SER 1450.0112
GLU 1460.0085
ASP 1470.0048
LYS 1480.0077
ALA 1490.0059
LEU 1500.0040
MET 1510.0039
GLN 1520.0019
GLY 1530.0021
SER 1540.0018
GLU 1550.0021
SER 1560.0024
ARG 1570.0017
PHE 1580.0012
PHE 1590.0009
VAL 1600.0010
SER 1610.0006
SER 1620.0009
SER 1630.0011
GLN 1640.0014
GLY 1650.0016
ARG 1660.0013
SER 1670.0011
GLU 1680.0008
LEU 1690.0010
HIS 1700.0007
ILE 1710.0009
GLU 1720.0007
ASN 1730.0013
LEU 1740.0012
ASN 1750.0018
MET 1760.0021
GLU 1770.0025
ALA 1780.0021
ASP 1790.0020
PRO 1800.0018
GLY 1810.0022
GLN 1820.0027
TYR 1830.0014
ARG 1840.0007
CYS 1850.0009
GLN 1860.0008
GLY 1870.0010
THR 1880.0016
SER 1890.0022
SER 1900.0030
LYS 1910.0022
GLY 1920.0018
SER 1930.0017
ASP 1940.0010
GLN 1950.0005
ALA 1960.0009
ILE 1970.0013
ILE 1980.0018
THR 1990.0016
LEU 2000.0011
ARG 2010.0007
VAL 2020.0008
ARG 2030.0029
SER 2040.0042
HIS 2050.0048
LEU 2060.0057
ALA 2070.0048
ALA 2080.0051
LEU 2090.0065
TRP 2100.0061
PRO 2110.0059
PHE 2120.0075
LEU 2130.0106
GLY 2140.0103
ILE 2150.0086
VAL 2160.0112
ALA 2170.0146
GLU 2180.0126
VAL 2190.0103
LEU 2200.0145
VAL 2210.0173
LEU 2220.0150
VAL 2230.0144
THR 2240.0204
ILE 2250.0216
ILE 2260.0157
PHE 2270.0152
ILE 2280.0232
TYR 2290.0196
GLU 2300.0077
LYS 2310.0154
ARG 2320.0222
ARG 2330.0247
LYS 2340.0106
GLY 70.0540
ALA 80.0398
LEU 90.0195
LEU 100.0287
ARG 110.0217
ASP 120.0036
LEU 130.0092
VAL 140.0126
LEU 150.0076
GLY 160.0160
VAL 170.0112
LEU 180.0108
GLY 190.0114
THR 200.0124
ALA 210.0122
ALA 220.0081
PHE 230.0067
LEU 240.0056
LEU 250.0062
ASP 260.0078
LEU 270.0096
GLY 280.0093
THR 290.0102
ASP 300.0110
LEU 310.0106
TRP 320.0195
ALA 330.0138
ALA 340.0155
VAL 350.0172
GLN 360.0106
TYR 370.0128
ALA 380.0228
LEU 390.0247
GLY 400.0185
GLY 410.0216
ARG 420.0166
TYR 430.0199
LEU 440.0185
TRP 450.0139
ALA 460.0189
ALA 470.0141
LEU 480.0137
VAL 490.0138
LEU 500.0151
ALA 510.0156
LEU 520.0112
LEU 530.0107
GLY 540.0110
LEU 550.0116
ALA 560.0111
SER 570.0117
VAL 580.0128
ALA 590.0104
LEU 600.0096
GLN 610.0120
LEU 620.0149
PHE 630.0133
SER 640.0139
TRP 650.0144
LEU 660.0122
TRP 670.0125
LEU 680.0135
ARG 690.0144
ALA 700.0139
ASP 710.0139
PRO 720.0331
ALA 730.0367
GLY 740.0271
LEU 750.0149
HIS 760.0257
GLY 770.0253
SER 780.0193
GLN 790.0254
PRO 800.0209
PRO 810.0158
ARG 820.0131
ARG 830.0244
CYS 840.0263
LEU 850.0130
ALA 860.0168
LEU 870.0126
LEU 880.0096
HIS 890.0080
LEU 900.0107
LEU 910.0077
GLN 920.0127
LEU 930.0139
GLY 940.0106
TYR 950.0093
LEU 960.0142
TYR 970.0116
ARG 980.0121
CYS 990.0123
VAL 1000.0103
GLN 1010.0095
GLU 1020.0131
LEU 1030.0125
ARG 1040.0115
GLN 1050.0101
GLY 1060.0093
LEU 1070.0156
LEU 1080.0139
VAL 1090.0052
TRP 1100.0146
GLN 1110.0184
GLN 1120.0098
GLU 1130.0132
GLU 1140.0093
PRO 1150.0037
SER 1160.0049
GLU 1170.0138
PHE 1180.0108
ASP 1190.0074
LEU 1200.0127
ALA 1210.0149
TYR 1220.0113
ALA 1230.0128
ASP 1240.0150
PHE 1250.0141
LEU 1260.0141
ALA 1270.0174
LEU 1280.0162
ASP 1290.0154
ILE 1300.0158
SER 1310.0151
MET 1320.0094
LEU 1330.0095
ARG 1340.0088
LEU 1350.0060
PHE 1360.0054
GLU 1370.0029
THR 1380.0016
PHE 1390.0021
LEU 1400.0034
GLU 1410.0038
THR 1420.0050
ALA 1430.0065
PRO 1440.0072
GLN 1450.0062
LEU 1460.0067
THR 1470.0066
LEU 1480.0063
VAL 1490.0060
LEU 1500.0054
ALA 1510.0047
ILE 1520.0043
MET 1530.0038
LEU 1540.0035
GLN 1550.0040
SER 1560.0041
GLY 1570.0058
ARG 1580.0054
ALA 1590.0079
GLU 1600.0108
TYR 1610.0156
TYR 1620.0108
GLN 1630.0099
TRP 1640.0108
VAL 1650.0126
GLY 1660.0121
ILE 1670.0084
CYS 1680.0085
THR 1690.0096
SER 1700.0087
PHE 1710.0076
LEU 1720.0086
GLY 1730.0103
ILE 1740.0099
SER 1750.0096
TRP 1760.0110
ALA 1770.0117
LEU 1780.0116
LEU 1790.0125
ASP 1800.0132
TYR 1810.0130
HIS 1820.0132
ARG 1830.0150
ALA 1840.0174
LEU 1850.0170
ARG 1860.0174
THR 1870.0302
CYS 1880.0322
LEU 1890.0351
PRO 1900.0415
SER 1910.0346
LYS 1920.0204
PRO 1930.0466
LEU 1940.0846
LEU 1950.0706
GLY 1960.0246
LEU 1970.0142
GLY 1980.0098
SER 1990.0121
SER 2000.0156
VAL 2010.0135
ILE 2020.0144
TYR 2030.0139
PHE 2040.0141
LEU 2050.0146
TRP 2060.0142
ASN 2070.0114
LEU 2080.0126
LEU 2090.0143
LEU 2100.0112
LEU 2110.0085
TRP 2120.0052
PRO 2130.0040
ARG 2140.0014
VAL 2150.0019
LEU 2160.0004
ALA 2170.0034
VAL 2180.0035
ALA 2190.0035
LEU 2200.0038
PHE 2210.0040
SER 2220.0053
ALA 2230.0043
LEU 2240.0033
PHE 2250.0043
PRO 2260.0056
SER 2270.0054
TYR 2280.0049
VAL 2290.0083
ALA 2300.0085
LEU 2310.0073
HIS 2320.0099
PHE 2330.0112
LEU 2340.0128
GLY 2350.0113
LEU 2360.0099
TRP 2370.0126
LEU 2380.0143
VAL 2390.0111
LEU 2400.0097
LEU 2410.0130
LEU 2420.0142
TRP 2430.0099
VAL 2440.0139
TRP 2450.0187
LEU 2460.0165
GLN 2470.0171
GLY 2480.0202
THR 2490.0161
ASP 2500.0185
PHE 2510.0097
MET 2520.0120
PRO 2530.0215
ASP 2540.0308
PRO 2550.0440
SER 2560.0531
SER 2570.0321
GLU 2580.0270
TRP 2590.0323
LEU 2600.0258
TYR 2610.0150
ARG 2620.0156
VAL 2630.0175
THR 2640.0116
VAL 2650.0057
ALA 2660.0101
THR 2670.0070
ILE 2680.0056
LEU 2690.0045
TYR 2700.0054
PHE 2710.0053
SER 2720.0074
TRP 2730.0061
PHE 2740.0047
ASN 2750.0062
VAL 2760.0063
ALA 2770.0130
GLU 2780.0145
GLY 2790.0174
ARG 2800.0175
THR 2810.0172
ARG 2820.0160
GLY 2830.0146
ARG 2840.0129
ALA 2850.0134
ILE 2860.0140
ILE 2870.0114
HIS 2880.0091
PHE 2890.0075
ALA 2900.0092
PHE 2910.0084
LEU 2920.0043
LEU 2930.0044
SER 2940.0042
ASP 2950.0046
SER 2960.0050
ILE 2970.0049
LEU 2980.0047
LEU 2990.0041
VAL 3000.0036
ALA 3010.0035
THR 3020.0032
TRP 3030.0036
VAL 3040.0037
THR 3050.0031
HIS 3060.0034
SER 3070.0029
SER 3080.0026
TRP 3090.0032
LEU 3100.0031
PRO 3110.0028
SER 3120.0076
GLY 3130.0061
ILE 3140.0026
PRO 3150.0023
LEU 3160.0054
GLN 3170.0134
LEU 3180.0155
TRP 3190.0125
LEU 3200.0165
PRO 3210.0236
VAL 3220.0278
GLY 3230.0216
CYS 3240.0287
GLY 3250.0324
CYS 3260.0256
PHE 3270.0195
PHE 3280.0238
LEU 3290.0242
GLY 3300.0177
LEU 3310.0164
ALA 3320.0199
LEU 3330.0184
ARG 3340.0129
LEU 3350.0132
VAL 3360.0166
TYR 3370.0121
TYR 3380.0129
HIS 3390.0133
TRP 3400.0144
LEU 3410.0148
HIS 3420.0106
PRO 3430.0238
SER 3440.0334
CYS 3450.0396
LEU 3680.0219
PRO 3690.0122
GLN 3700.0158
ASN 3710.0127
ARG 3720.0115
ARG 3730.0091
MET 3740.0136
THR 3750.0159
HIS 3760.0116
LEU 3770.0101
ALA 3780.0145
GLN 3790.0144
LYS 3800.0092
PHE 3810.0105
PHE 3820.0164
PRO 3830.0159
SER 20.0023
VAL 30.0021
GLU 40.0024
GLU 50.0022
SER 60.0024
GLY 70.0027
GLY 80.0021
ARG 90.0016
LEU 100.0009
VAL 110.0014
THR 120.0024
PRO 130.0025
GLY 140.0028
THR 150.0026
PRO 160.0018
LEU 170.0011
THR 180.0013
LEU 190.0016
THR 200.0020
CYS 210.0023
THR 220.0022
VAL 230.0019
SER 240.0021
GLY 250.0019
PHE 260.0013
SER 270.0009
LEU 280.0010
SER 290.0009
ASP 300.0008
TYR 310.0009
ALA 320.0012
MET 330.0013
ASN 340.0015
TRP 350.0015
VAL 360.0018
ARG 370.0017
GLN 380.0018
ALA 390.0018
PRO 400.0019
GLY 410.0019
LYS 420.0014
GLY 430.0012
LEU 440.0013
GLU 450.0015
TRP 460.0014
ILE 470.0016
GLY 480.0014
ILE 490.0012
ILE 500.0011
TYR 510.0009
ALA 520.0010
SER 530.0010
GLY 540.0011
SER 550.0010
ARG 560.0012
TYR 570.0012
TYR 580.0014
ALA 590.0015
SER 600.0016
TRP 610.0017
ALA 620.0016
LYS 630.0014
GLY 640.0011
ARG 650.0010
PHE 660.0010
THR 670.0010
ILE 680.0011
SER 690.0010
LYS 700.0012
THR 710.0015
SER 720.0014
THR 730.0018
THR 740.0019
VAL 750.0015
ASP 760.0017
LEU 770.0014
LYS 780.0007
ILE 790.0001
THR 800.0009
SER 810.0014
PRO 820.0014
THR 830.0020
THR 840.0018
GLU 850.0022
ASP 860.0014
THR 870.0011
ALA 880.0014
THR 890.0016
TYR 900.0017
PHE 910.0020
CYS 920.0019
ALA 930.0016
ARG 940.0012
TYR 950.0012
TYR 960.0011
ALA 970.0015
GLY 980.0016
SER 990.0015
ASP 1000.0014
ILE 1010.0013
TRP 1020.0016
GLY 1030.0017
PRO 1040.0019
GLY 1050.0020
THR 1060.0022
LEU 1070.0020
VAL 1080.0011
THR 1090.0004
VAL 1100.0007
SER 1110.0014
SER 1120.0021
ALA 1130.0013
SER 1140.0013
THR 1150.0013
LYS 1160.0013
GLY 1170.0012
PRO 1180.0009
SER 1190.0010
VAL 1200.0010
PHE 1210.0013
PRO 1220.0011
LEU 1230.0011
ALA 1240.0010
PRO 1250.0010
SER 1260.0009
SER 1270.0009
GLY 1330.0036
THR 1340.0028
ALA 1350.0017
ALA 1360.0013
LEU 1370.0007
GLY 1380.0008
CYS 1390.0008
LEU 1400.0008
VAL 1410.0007
LYS 1420.0007
ASP 1430.0008
TYR 1440.0007
PHE 1450.0006
PRO 1460.0006
GLU 1470.0004
PRO 1480.0004
VAL 1490.0003
THR 1500.0003
VAL 1510.0004
SER 1520.0005
TRP 1530.0006
ASN 1540.0005
SER 1550.0006
GLY 1560.0008
ALA 1570.0008
LEU 1580.0010
THR 1590.0012
SER 1600.0014
GLY 1610.0012
VAL 1620.0009
HIS 1630.0010
THR 1640.0008
PHE 1650.0009
PRO 1660.0008
ALA 1670.0008
VAL 1680.0011
LEU 1690.0009
GLN 1700.0009
SER 1710.0009
SER 1720.0006
GLY 1730.0003
LEU 1740.0004
TYR 1750.0004
SER 1760.0007
LEU 1770.0008
SER 1780.0010
SER 1790.0008
VAL 1800.0007
VAL 1810.0006
THR 1820.0007
VAL 1830.0024
PRO 1840.0034
SER 1850.0034
SER 1860.0043
SER 1870.0034
LEU 1880.0027
GLY 1890.0038
THR 1900.0043
GLN 1910.0030
THR 1920.0019
TYR 1930.0006
ILE 1940.0004
CYS 1950.0003
ASN 1960.0004
VAL 1970.0007
ASN 1980.0010
HIS 1990.0010
LYS 2000.0014
PRO 2010.0014
SER 2020.0016
ASN 2030.0020
THR 2040.0017
LYS 2050.0013
VAL 2060.0011
ASP 2070.0008
LYS 2080.0006
LYS 2090.0005
VAL 2100.0005
GLU 2110.0006
PRO 2120.0006
LYS 2130.0016
SER 2140.0026
ALA 10.0009
ASP 20.0005
VAL 30.0003
VAL 40.0004
MET 50.0008
THR 60.0011
GLN 70.0014
THR 80.0022
PRO 90.0028
SER 100.0030
SER 110.0035
VAL 120.0030
SER 130.0024
ALA 140.0021
ALA 150.0018
VAL 160.0021
GLY 170.0022
GLY 180.0022
THR 190.0020
VAL 200.0019
THR 210.0026
ILE 220.0023
ASN 230.0021
CYS 240.0016
GLN 250.0016
ALA 260.0013
SER 270.0013
GLN 280.0011
SER 290.0011
ILE 300.0008
SER 310.0007
ALA 320.0005
TYR 330.0005
LEU 340.0007
ALA 350.0008
TRP 360.0009
TYR 370.0010
GLN 380.0012
GLN 390.0014
LYS 400.0017
PRO 410.0021
GLY 420.0024
GLN 430.0022
PRO 440.0017
PRO 450.0011
LYS 460.0019
LEU 470.0017
LEU 480.0015
ILE 490.0013
TYR 500.0013
ASP 510.0010
ALA 520.0008
SER 530.0011
ASP 540.0016
LEU 550.0019
ALA 560.0028
SER 570.0042
GLY 580.0042
VAL 590.0025
SER 600.0016
SER 610.0021
ARG 620.0016
PHE 630.0014
LYS 640.0016
GLY 650.0014
SER 660.0018
GLY 670.0018
SER 680.0018
GLY 690.0018
THR 700.0019
GLN 710.0020
PHE 720.0017
THR 730.0019
LEU 740.0017
THR 750.0019
ILE 760.0015
SER 770.0018
ALA 780.0021
LEU 790.0017
GLU 800.0017
CYS 810.0011
ALA 820.0011
ASP 830.0011
ALA 840.0013
ALA 850.0016
THR 860.0018
TYR 870.0014
TYR 880.0011
CYS 890.0007
GLN 900.0007
SER 910.0006
TYR 920.0006
TYR 930.0006
ALA 940.0007
ILE 950.0006
ILE 960.0008
THR 970.0008
TYR 980.0006
GLY 990.0006
ALA 1000.0005
ALA 1010.0009
PHE 1020.0007
GLY 1030.0006
GLY 1040.0010
GLY 1050.0013
THR 1060.0025
GLU 1070.0023
VAL 1080.0017
VAL 1090.0017
VAL 1100.0013
LYS 1110.0025
ARG 1120.0025
THR 1130.0026
VAL 1140.0024
ALA 1150.0021
ALA 1160.0018
PRO 1170.0017
SER 1180.0018
VAL 1190.0016
PHE 1200.0017
ILE 1210.0016
PHE 1220.0013
PRO 1230.0013
PRO 1240.0012
SER 1250.0016
ASP 1260.0027
GLU 1270.0031
GLN 1280.0023
LEU 1290.0024
LYS 1300.0034
SER 1310.0036
GLY 1320.0031
THR 1330.0022
ALA 1340.0012
SER 1350.0007
VAL 1360.0009
VAL 1370.0011
CYS 1380.0012
LEU 1390.0015
LEU 1400.0017
ASN 1410.0021
ASN 1420.0024
PHE 1430.0023
TYR 1440.0024
PRO 1450.0024
ARG 1460.0025
GLU 1470.0021
ALA 1480.0016
LYS 1490.0014
VAL 1500.0012
GLN 1510.0008
TRP 1520.0009
LYS 1530.0007
VAL 1540.0013
ASP 1550.0014
ASN 1560.0013
ALA 1570.0014
LEU 1580.0011
GLN 1590.0013
SER 1600.0013
GLY 1610.0012
ASN 1620.0009
SER 1630.0010
GLN 1640.0014
GLU 1650.0019
SER 1660.0021
VAL 1670.0020
THR 1680.0019
GLU 1690.0018
GLN 1700.0017
ASP 1710.0020
SER 1720.0019
LYS 1730.0021
ASP 1740.0019
CYS 1750.0017
THR 1760.0026
TYR 1770.0024
SER 1780.0022
LEU 1790.0020
SER 1800.0018
SER 1810.0016
THR 1820.0012
LEU 1830.0010
THR 1840.0011
LEU 1850.0014
SER 1860.0027
LYS 1870.0023
ALA 1880.0023
ASP 1890.0023
TYR 1900.0016
GLU 1910.0015
LYS 1920.0019
HIS 1930.0019
LYS 1940.0016
VAL 1950.0017
TYR 1960.0013
ALA 1970.0010
CYS 1980.0009
GLU 1990.0008
VAL 2000.0009
THR 2010.0015
HIS 2020.0010
GLN 2030.0010
GLY 2040.0015
LEU 2050.0017
SER 2060.0105
SER 2070.0093
PRO 2080.0060
VAL 2090.0036
THR 2100.0014
LYS 2110.0015
SER 2120.0014
PHE 2130.0012
ASN 2140.0011
ARG 2150.0010
GLY 2160.0009
GLU 2170.0016

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.