CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSFERASE 18-AUG-21 7PHT  ***

Normal Mode Analysis for ID 2603121028102304182

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.5317
mode 8 1.14 0.4326
mode 9 1.54 0.6043
mode 10 1.90 0.2575
mode 11 2.50 0.5851
mode 12 3.07 0.7294
mode 13 3.33 0.2545
mode 14 3.81 0.3786
mode 15 4.46 0.5734
mode 16 4.58 0.6374
mode 17 4.98 0.6159
mode 18 5.12 0.3905
mode 19 5.40 0.5406
mode 20 5.59 0.1965
mode 21 6.06 0.3208
mode 22 6.54 0.4085
mode 23 6.71 0.2856
mode 24 7.16 0.5462
mode 25 7.24 0.2065
mode 26 7.82 0.4885
mode 27 7.95 0.4992
mode 28 8.22 0.6373
mode 29 8.75 0.5145
mode 30 8.90 0.4338
mode 31 8.98 0.5762
mode 32 9.33 0.1513
mode 33 9.49 0.3733
mode 34 9.82 0.5071
mode 35 9.94 0.3744
mode 36 10.01 0.3882
mode 37 10.40 0.4966
mode 38 10.49 0.4367
mode 39 10.53 0.3208
mode 40 10.60 0.3193
mode 41 10.65 0.3093
mode 42 10.85 0.4387
mode 43 11.03 0.1950
mode 44 11.16 0.2806
mode 45 11.25 0.5018
mode 46 11.47 0.5499
mode 47 11.64 0.6083
mode 48 11.65 0.3733
mode 49 11.91 0.6127
mode 50 11.96 0.4166
mode 51 12.09 0.3812
mode 52 12.16 0.2990
mode 53 12.22 0.4928
mode 54 12.39 0.4701
mode 55 12.43 0.4094
mode 56 12.57 0.5139
mode 57 12.65 0.3720
mode 58 12.68 0.4959
mode 59 12.83 0.5110
mode 60 12.89 0.4541
mode 61 13.04 0.4918
mode 62 13.30 0.4496
mode 63 13.33 0.4363
mode 64 13.35 0.3736
mode 65 13.44 0.4355
mode 66 13.54 0.3889
mode 67 13.61 0.4267
mode 68 13.71 0.3973
mode 69 13.74 0.4104
mode 70 13.89 0.4945
mode 71 13.91 0.3719
mode 72 13.99 0.5323
mode 73 14.08 0.4446
mode 74 14.17 0.4219
mode 75 14.24 0.4111
mode 76 14.29 0.4214
mode 77 14.32 0.3402
mode 78 14.34 0.3745
mode 79 14.45 0.4522
mode 80 14.51 0.4635
mode 81 14.61 0.3561
mode 82 14.63 0.4485
mode 83 14.69 0.5620
mode 84 14.76 0.3848
mode 85 14.77 0.4413
mode 86 14.84 0.5475
mode 87 14.93 0.4827
mode 88 14.96 0.4699
mode 89 15.06 0.3816
mode 90 15.14 0.4567
mode 91 15.16 0.5136
mode 92 15.21 0.5920
mode 93 15.25 0.6246
mode 94 15.27 0.4571
mode 95 15.35 0.4842
mode 96 15.41 0.3356
mode 97 15.44 0.3899
mode 98 15.51 0.4380
mode 99 15.55 0.3549
mode 100 15.56 0.1919
mode 101 15.65 0.3896
mode 102 15.75 0.3345
mode 103 15.82 0.4668
mode 104 15.87 0.2943
mode 105 15.90 0.4582
mode 106 15.92 0.3447

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.