CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  Ahmad Khan  ***

Normal Mode Analysis for ID 2603140834172769745

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 1 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.4588
mode 8 1.09 0.3898
mode 9 1.16 0.1775
mode 10 1.25 0.0955
mode 11 1.41 0.3384
mode 12 1.42 0.3974
mode 13 1.47 0.2126
mode 14 1.60 0.1209
mode 15 1.64 0.3232
mode 16 1.70 0.3648
mode 17 1.73 0.3406
mode 18 1.82 0.4170
mode 19 1.91 0.2946
mode 20 1.92 0.2096
mode 21 1.94 0.2581
mode 22 1.98 0.4717
mode 23 2.01 0.2196
mode 24 2.05 0.3732
mode 25 2.11 0.4027
mode 26 2.18 0.1989
mode 27 2.24 0.4025
mode 28 2.26 0.3904
mode 29 2.28 0.3037
mode 30 2.30 0.4918
mode 31 2.30 0.5311
mode 32 2.37 0.5534
mode 33 2.38 0.3328
mode 34 2.47 0.2417
mode 35 2.50 0.4576
mode 36 2.55 0.2610
mode 37 2.58 0.4174
mode 38 2.62 0.3552
mode 39 2.66 0.3751
mode 40 2.69 0.4209
mode 41 2.71 0.2713
mode 42 2.74 0.5000
mode 43 2.79 0.3016
mode 44 2.81 0.3454
mode 45 2.85 0.4128
mode 46 2.86 0.4414
mode 47 2.88 0.3603
mode 48 2.93 0.3267
mode 49 2.94 0.3810
mode 50 3.00 0.1933
mode 51 3.01 0.2935
mode 52 3.04 0.4270
mode 53 3.07 0.4344
mode 54 3.10 0.3761
mode 55 3.11 0.4981
mode 56 3.13 0.3975
mode 57 3.17 0.2497
mode 58 3.17 0.4436
mode 59 3.22 0.2974
mode 60 3.24 0.2853
mode 61 3.28 0.3628
mode 62 3.31 0.3428
mode 63 3.32 0.2689
mode 64 3.35 0.2659
mode 65 3.36 0.1936
mode 66 3.38 0.1640
mode 67 3.39 0.4386
mode 68 3.40 0.3931
mode 69 3.42 0.5027
mode 70 3.46 0.4516
mode 71 3.48 0.4231
mode 72 3.50 0.3475
mode 73 3.55 0.4293
mode 74 3.56 0.4400
mode 75 3.58 0.3404
mode 76 3.60 0.3595
mode 77 3.62 0.2197
mode 78 3.65 0.3563
mode 79 3.67 0.1802
mode 80 3.69 0.4522
mode 81 3.74 0.3750
mode 82 3.75 0.3930
mode 83 3.75 0.4215
mode 84 3.78 0.3161
mode 85 3.78 0.3374
mode 86 3.80 0.4010
mode 87 3.82 0.2036
mode 88 3.82 0.3819
mode 89 3.84 0.3469
mode 90 3.86 0.3954
mode 91 3.87 0.4009
mode 92 3.90 0.3776
mode 93 3.93 0.3609
mode 94 3.96 0.3773
mode 95 3.97 0.3651
mode 96 3.99 0.4474
mode 97 4.01 0.3125
mode 98 4.05 0.2684
mode 99 4.05 0.2140
mode 100 4.09 0.3378
mode 101 4.12 0.3021
mode 102 4.13 0.3987
mode 103 4.14 0.4525
mode 104 4.15 0.2630
mode 105 4.17 0.3683
mode 106 4.17 0.3543

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.