CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  jdeleon01  ***

<R2> analysis for 2603141546282829250

---  normal mode 40  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0382
SER 270.0299
LEU 280.0235
SER 290.0287
CYS 300.0247
ASP 310.0207
ARG 320.0206
ASN 330.0365
GLY 340.0207
ILE 350.0088
CYS 360.0106
LYS 370.0142
GLY 380.0170
SER 390.0185
SER 400.0134
GLY 410.0081
SER 420.0026
LEU 430.0041
ASN 440.0094
SER 450.0091
ILE 460.0055
PRO 470.0103
SER 480.0121
GLY 490.0103
LEU 500.0054
THR 510.0034
GLU 520.0030
ALA 530.0047
VAL 540.0044
LYS 550.0055
SER 560.0066
LEU 570.0055
ASP 580.0073
LEU 590.0052
SER 600.0111
ASN 610.0137
ASN 620.0093
ARG 630.0126
ILE 640.0109
THR 650.0135
TYR 660.0122
ILE 670.0101
SER 680.0102
ASN 690.0092
SER 700.0086
ASP 710.0078
LEU 720.0059
GLN 730.0064
ARG 740.0054
CYS 750.0026
VAL 760.0024
ASN 770.0030
LEU 780.0038
GLN 790.0053
ALA 800.0066
LEU 810.0068
VAL 820.0087
LEU 830.0095
THR 840.0125
SER 850.0149
ASN 860.0135
GLY 870.0140
ILE 880.0121
ASN 890.0135
THR 900.0120
ILE 910.0097
GLU 920.0093
GLU 930.0078
ASP 940.0065
SER 950.0070
PHE 960.0052
SER 970.0051
SER 980.0040
LEU 990.0024
GLY 1000.0020
SER 1010.0031
LEU 1020.0040
GLU 1030.0047
HIS 1040.0056
LEU 1050.0053
ASP 1060.0068
LEU 1070.0077
SER 1080.0089
TYR 1090.0107
ASN 1100.0106
TYR 1110.0103
LEU 1120.0073
SER 1130.0047
ASN 1140.0035
LEU 1150.0034
SER 1160.0026
SER 1170.0021
SER 1180.0020
TRP 1190.0041
PHE 1200.0036
LYS 1210.0019
PRO 1220.0018
LEU 1230.0026
SER 1240.0031
SER 1250.0040
LEU 1260.0040
THR 1270.0044
PHE 1280.0042
LEU 1290.0033
ASN 1300.0036
LEU 1310.0031
LEU 1320.0043
GLY 1330.0048
ASN 1340.0035
PRO 1350.0036
TYR 1360.0042
LYS 1370.0067
THR 1380.0062
LEU 1390.0057
GLY 1400.0059
GLU 1410.0062
THR 1420.0055
SER 1430.0049
LEU 1440.0045
PHE 1450.0046
SER 1460.0046
HIS 1470.0038
LEU 1480.0041
THR 1490.0044
LYS 1500.0046
LEU 1510.0035
GLN 1520.0032
ILE 1530.0038
LEU 1540.0043
ARG 1550.0038
VAL 1560.0043
GLY 1570.0048
ASN 1580.0054
MET 1590.0089
ASP 1600.0099
THR 1610.0093
PHE 1620.0075
THR 1630.0095
LYS 1640.0085
ILE 1650.0072
GLN 1660.0066
ARG 1670.0052
LYS 1680.0059
ASP 1690.0061
PHE 1700.0050
ALA 1710.0052
GLY 1720.0047
LEU 1730.0036
THR 1740.0020
PHE 1750.0023
LEU 1760.0035
GLU 1770.0044
GLU 1780.0053
LEU 1790.0054
GLU 1800.0061
ILE 1810.0060
ASP 1820.0068
ALA 1830.0079
SER 1840.0097
ASP 1850.0103
LEU 1860.0088
GLN 1870.0100
SER 1880.0083
TYR 1890.0067
GLU 1900.0056
PRO 1910.0033
LYS 1920.0022
SER 1930.0044
LEU 1940.0041
LYS 1950.0020
SER 1960.0017
ILE 1970.0024
GLN 1980.0028
ASN 1990.0052
VAL 2000.0064
SER 2010.0081
HIS 2020.0090
LEU 2030.0080
ILE 2040.0088
LEU 2050.0077
HIS 2060.0086
MET 2070.0086
LYS 2080.0100
GLN 2090.0087
HIS 2100.0074
ILE 2110.0064
LEU 2120.0061
LEU 2130.0075
LEU 2140.0060
GLU 2150.0039
ILE 2160.0063
PHE 2170.0082
VAL 2180.0066
ASP 2190.0049
VAL 2200.0075
THR 2210.0096
SER 2220.0092
SER 2230.0082
VAL 2240.0093
GLU 2250.0111
CYS 2260.0115
LEU 2270.0098
GLU 2280.0102
LEU 2290.0089
ARG 2300.0099
ASP 2310.0102
THR 2320.0089
ASP 2330.0078
LEU 2340.0069
ASP 2350.0053
THR 2360.0036
PHE 2370.0047
HIS 2380.0041
PHE 2390.0072
SER 2400.0069
GLU 2410.0097
LEU 2420.0089
SER 2430.0092
THR 2440.0116
ASN 2480.0112
SER 2490.0109
LEU 2500.0117
ILE 2510.0116
LYS 2520.0117
LYS 2530.0113
PHE 2540.0101
THR 2550.0102
PHE 2560.0088
ARG 2570.0095
ASN 2580.0088
VAL 2590.0072
LYS 2600.0058
ILE 2610.0046
THR 2620.0029
ASP 2630.0022
GLU 2640.0025
SER 2650.0036
LEU 2660.0058
PHE 2670.0059
GLN 2680.0067
VAL 2690.0088
MET 2700.0111
LYS 2710.0105
LEU 2720.0108
LEU 2730.0130
ASN 2740.0138
GLN 2750.0130
ILE 2760.0117
SER 2770.0114
GLY 2780.0113
LEU 2790.0114
LEU 2800.0093
GLU 2810.0089
LEU 2820.0082
GLU 2830.0082
PHE 2840.0066
ASP 2850.0069
ASP 2860.0058
CYS 2870.0045
THR 2880.0017
LEU 2890.0012
ASN 2900.0021
GLY 2910.0029
VAL 2920.0020
GLY 2930.0029
ASN 2940.0030
PHE 2950.0015
ARG 2960.0006
ALA 2970.0051
SER 2980.0074
ASP 2990.0124
ASN 3000.0094
ASP 3010.0140
ARG 3020.0183
VAL 3030.0152
ILE 3040.0129
ASP 3050.0115
PRO 3060.0107
GLY 3070.0106
LYS 3080.0049
VAL 3090.0057
GLU 3100.0046
THR 3110.0060
LEU 3120.0065
THR 3130.0056
ILE 3140.0048
ARG 3150.0046
ARG 3160.0025
LEU 3170.0032
HIS 3180.0033
ILE 3190.0061
PRO 3200.0072
ARG 3210.0085
PHE 3220.0086
TYR 3230.0079
LEU 3240.0052
PHE 3250.0049
TYR 3260.0047
ASP 3270.0045
LEU 3280.0032
SER 3290.0040
THR 3300.0050
LEU 3310.0054
TYR 3320.0078
SER 3330.0072
LEU 3340.0082
THR 3350.0094
GLU 3360.0075
ARG 3370.0071
VAL 3380.0061
LYS 3390.0068
ARG 3400.0048
ILE 3410.0037
THR 3420.0059
VAL 3430.0068
GLU 3440.0084
ASN 3450.0070
SER 3460.0078
LYS 3470.0089
VAL 3480.0066
PHE 3490.0079
LEU 3500.0069
VAL 3510.0059
PRO 3520.0109
CYS 3530.0137
LEU 3540.0145
LEU 3550.0103
SER 3560.0104
GLN 3570.0141
HIS 3580.0131
LEU 3590.0115
LYS 3600.0133
SER 3610.0132
LEU 3620.0094
GLU 3630.0106
TYR 3640.0078
LEU 3650.0053
ASP 3660.0085
LEU 3670.0090
SER 3680.0134
GLU 3690.0155
ASN 3700.0135
LEU 3710.0145
MET 3720.0147
VAL 3730.0188
GLU 3740.0161
GLU 3750.0208
TYR 3760.0170
LEU 3770.0119
LYS 3780.0146
ASN 3790.0168
SER 3800.0115
ALA 3810.0125
CYS 3820.0198
GLU 3830.0247
ASP 3840.0229
ALA 3850.0166
TRP 3860.0131
PRO 3870.0187
SER 3880.0170
LEU 3890.0107
GLN 3900.0123
THR 3910.0110
LEU 3920.0072
ILE 3930.0111
LEU 3940.0124
ARG 3950.0169
GLN 3960.0213
ASN 3970.0192
HIS 3980.0216
LEU 3990.0188
ALA 4000.0202
SER 4010.0169
LEU 4020.0139
GLU 4030.0113
LYS 4040.0139
THR 4050.0109
GLY 4060.0070
GLU 4070.0075
THR 4080.0088
LEU 4090.0021
LEU 4100.0040
THR 4110.0097
LEU 4120.0081
LYS 4130.0114
ASN 4140.0139
LEU 4150.0097
THR 4160.0112
ASN 4170.0121
ILE 4180.0102
ASP 4190.0144
ILE 4200.0145
SER 4210.0182
LYS 4220.0215
ASN 4230.0198
SER 4240.0185
PHE 4250.0150
HIS 4260.0126
SER 4270.0099
MET 4280.0109
PRO 4290.0109
GLU 4300.0121
THR 4310.0103
CYS 4320.0062
GLN 4330.0038
TRP 4340.0054
PRO 4350.0061
GLU 4360.0067
LYS 4370.0104
MET 4380.0102
LYS 4390.0145
TYR 4400.0122
LEU 4410.0117
ASN 4420.0133
LEU 4430.0136
SER 4440.0131
SER 4450.0142
THR 4460.0125
ARG 4470.0127
ILE 4480.0098
HIS 4490.0105
SER 4500.0111
VAL 4510.0112
THR 4520.0142
GLY 4530.0138
CYS 4540.0121
ILE 4550.0126
PRO 4560.0140
LYS 4570.0148
THR 4580.0141
LEU 4590.0133
GLU 4600.0105
ILE 4610.0087
LEU 4620.0088
ASP 4630.0081
VAL 4640.0072
SER 4650.0072
ASN 4660.0073
ASN 4670.0073
ASN 4680.0079
LEU 4690.0075
ASN 4700.0083
LEU 4710.0073
PHE 4720.0088
SER 4730.0107
LEU 4740.0101
ASN 4750.0105
LEU 4760.0117
PRO 4770.0115
GLN 4780.0108
LEU 4790.0085
LYS 4800.0054
GLU 4810.0024
LEU 4820.0026
TYR 4830.0033
ILE 4840.0045
SER 4850.0062
ARG 4860.0079
ASN 4870.0078
LYS 4880.0085
LEU 4890.0077
MET 4900.0084
THR 4910.0086
LEU 4920.0099
PRO 4930.0085
ASP 4940.0084
ALA 4950.0083
SER 4960.0060
LEU 4970.0076
LEU 4980.0054
PRO 4990.0034
MET 5000.0054
LEU 5010.0033
LEU 5020.0055
VAL 5030.0065
LEU 5040.0082
LYS 5050.0081
ILE 5060.0086
SER 5070.0094
ARG 5080.0114
ASN 5090.0102
GLN 5100.0109
LEU 5110.0118
LYS 5120.0157
SER 5130.0149
VAL 5140.0167
PRO 5150.0186
ASP 5160.0190
GLY 5170.0194
ILE 5180.0194
PHE 5190.0190
ASP 5200.0166
ARG 5210.0136
LEU 5220.0099
THR 5230.0093
SER 5240.0079
LEU 5250.0094
GLN 5260.0121
LYS 5270.0137
ILE 5280.0128
TRP 5290.0129
LEU 5300.0118
HIS 5310.0118
THR 5320.0120
ASN 5330.0134
PRO 5340.0141
TRP 5350.0139
ASP 5360.0150
CYS 5370.0093
SER 5380.0121
CYS 5390.0080
PRO 5400.0052
ARG 5410.0090
ILE 5420.0058
ASP 5430.0094
TYR 5440.0138
LEU 5450.0118
SER 5460.0077
ARG 5470.0154
TRP 5480.0157
LEU 5490.0120
ASN 5500.0135
LYS 5510.0193
ASN 5520.0136
SER 5530.0126
GLN 5540.0155
LYS 5550.0157
GLU 5560.0137
GLN 5570.0148
GLY 5580.0126
SER 5590.0099
ALA 5600.0107
LYS 5610.0099
CYS 5620.0122
SER 5630.0215
GLY 5640.0352
SER 5650.0323
GLY 5660.0279
LYS 5670.0191
PRO 5680.0054
VAL 5690.0024
ARG 5700.0081
SER 5710.0124
ILE 5720.0122
ILE 5730.0184
CYS 5740.0178
PRO 5750.0248
GLY 10.0258
ILE 20.0193
ILE 30.0177
ASN 40.0163
THR 50.0107
LEU 60.0103
GLN 70.0129
LYS 80.0107
TYR 90.0094
TYR 100.0103
CYS 110.0107
ARG 120.0107
VAL 130.0088
ARG 140.0087
GLY 150.0070
GLY 160.0070
ARG 170.0082
CYS 180.0093
ALA 190.0082
VAL 200.0100
LEU 210.0125
SER 220.0122
CYS 230.0135
LEU 240.0166
PRO 250.0172
LYS 260.0180
GLU 270.0177
GLU 280.0205
GLN 290.0135
ILE 300.0117
GLY 310.0154
LYS 320.0142
CYS 330.0090
SER 340.0110
THR 350.0125
ARG 360.0107
GLY 370.0097
ARG 380.0107
LYS 390.0096
CYS 400.0100
CYS 410.0104
ARG 420.0088
ARG 430.0097
LYS 440.0130
LYS 450.0120
GLU 460.0139
ALA 470.0149
ALA 480.0153
ALA 490.0106
LYS 500.0106
GLU 510.0117
ALA 520.0121
ALA 530.0087
ALA 540.0105
LYS 550.0099
GLU 560.0081
ALA 570.0088
ALA 580.0083
ALA 590.0061
LYS 600.0077
ALA 610.0080
LYS 620.0062
PHE 630.0075
VAL 640.0099
ALA 650.0090
ALA 660.0090
TRP 670.0127
THR 680.0137
LEU 690.0103
LYS 700.0100
ALA 710.0131
ALA 720.0129
ALA 730.0088
GLU 740.0098
ALA 750.0085
ALA 760.0070
ALA 770.0072
LYS 780.0073
GLU 790.0053
ALA 800.0064
ALA 810.0059
ALA 820.0060
LYS 830.0055
GLU 840.0036
ALA 850.0052
ALA 860.0047
ALA 870.0055
LYS 880.0045
GLY 890.0055
SER 900.0078
SER 910.0070
ILE 920.0075
GLY 930.0043
MET 940.0046
PHE 950.0047
GLU 960.0062
THR 970.0037
ARG 980.0035
GLY 990.0043
ALA 1000.0043
TRP 1010.0050
ASP 1020.0050
PHE 1030.0043
GLY 1040.0038
PRO 1050.0069
GLY 1060.0075
PRO 1070.0091
GLY 1080.0083
LYS 1090.0079
LEU 1100.0087
TRP 1110.0100
PHE 1120.0093
LYS 1130.0137
LYS 1140.0128
GLY 1150.0121
SER 1160.0109
SER 1170.0103
ILE 1180.0096
GLY 1190.0090
MET 1200.0075
PHE 1210.0060
GLU 1220.0059
THR 1230.0062
GLU 1240.0051
ALA 1250.0047
ALA 1260.0068
ALA 1270.0073
LYS 1280.0055
GLU 1290.0102
ALA 1300.0104
ALA 1310.0105
ALA 1320.0104
LYS 1330.0149
GLU 1340.0130
ALA 1350.0128
ALA 1360.0142
ALA 1370.0144
LYS 1380.0141
TYR 1390.0163
GLY 1400.0153
PHE 1410.0169
GLY 1420.0152
GLY 1430.0151
THR 1440.0134
ASN 1450.0136
ILE 1460.0134
LYS 1470.0133
MET 1480.0136
ALA 1490.0109
ALA 1500.0112
TYR 1510.0104
SER 1520.0103
SER 1530.0077
ILE 1540.0080
GLY 1550.0081
MET 1560.0078
PHE 1570.0055
GLU 1580.0066
THR 1590.0059
ARG 1600.0054
ALA 1610.0081
ALA 1620.0082
TYR 1630.0083
GLY 1640.0097
MET 1650.0100
PHE 1660.0104
GLU 1670.0102
THR 1680.0098
ARG 1690.0076
GLY 1700.0069
ALA 1710.0055
TRP 1720.0076
ALA 1730.0151
ALA 1740.0138
TYR 1750.0130
GLY 1760.0150
SER 1770.0174
SER 1780.0167
ILE 1790.0184
GLY 1800.0184
MET 1810.0177
PHE 1820.0200
GLU 1830.0230
THR 1840.0213
ARG 1850.0257
GLY 1860.0266
PRO 1870.0285
GLY 1880.0382
PRO 1890.0372
GLY 1900.0244
GLY 1910.0223
SER 1920.0333
SER 1930.0287
ILE 1940.0245
GLY 1950.0209
MET 1960.0275
PHE 1970.0213
GLU 1980.0218
THR 1990.0160
ARG 2000.0147
GLY 2010.0125
ALA 2020.0135
TRP 2030.0115
ASP 2040.0104
PHE 2050.0063
GLY 2060.0073
HIS 2070.0071
HIS 2080.0065
HIS 2090.0032
HIS 2100.0052
HIS 2110.0044
HIS 2120.0045

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.