CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  jdeleon01  ***

Normal Mode Analysis for ID 2603141546282829250

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.3565
mode 8 1.39 0.5247
mode 9 1.78 0.6383
mode 10 1.85 0.6700
mode 11 2.46 0.6060
mode 12 2.56 0.5030
mode 13 2.88 0.4821
mode 14 3.33 0.5129
mode 15 3.97 0.5929
mode 16 4.41 0.5964
mode 17 4.73 0.3805
mode 18 5.24 0.6135
mode 19 5.74 0.1652
mode 20 6.04 0.3394
mode 21 6.37 0.4831
mode 22 7.00 0.6064
mode 23 7.11 0.5128
mode 24 7.33 0.2966
mode 25 7.62 0.4684
mode 26 7.99 0.1896
mode 27 8.42 0.5671
mode 28 8.76 0.5418
mode 29 9.14 0.5600
mode 30 9.26 0.5363
mode 31 9.64 0.5292
mode 32 9.89 0.6404
mode 33 10.11 0.3799
mode 34 10.55 0.4436
mode 35 10.72 0.3988
mode 36 10.83 0.3627
mode 37 11.36 0.4896
mode 38 11.65 0.5284
mode 39 11.77 0.5828
mode 40 11.83 0.5587
mode 41 12.22 0.2686
mode 42 12.38 0.3626
mode 43 12.51 0.3915
mode 44 12.59 0.3182
mode 45 13.10 0.3359
mode 46 13.19 0.4742
mode 47 13.38 0.4061
mode 48 13.72 0.5140
mode 49 13.89 0.2970
mode 50 13.93 0.5031
mode 51 14.02 0.3216
mode 52 14.10 0.1983
mode 53 14.24 0.3315
mode 54 14.47 0.2814
mode 55 14.60 0.4538
mode 56 14.76 0.5981
mode 57 14.92 0.2509
mode 58 15.14 0.4077
mode 59 15.30 0.4778
mode 60 15.39 0.3738
mode 61 15.46 0.3435
mode 62 15.70 0.3736
mode 63 15.75 0.3133
mode 64 15.90 0.2833
mode 65 16.00 0.3622
mode 66 16.10 0.3447
mode 67 16.26 0.4184
mode 68 16.41 0.5511
mode 69 16.56 0.5250
mode 70 16.60 0.5531
mode 71 16.79 0.3118
mode 72 16.96 0.5111
mode 73 16.99 0.4018
mode 74 17.21 0.3383
mode 75 17.39 0.5387
mode 76 17.46 0.4005
mode 77 17.56 0.5089
mode 78 17.64 0.5970
mode 79 17.80 0.5550
mode 80 17.86 0.6404
mode 81 17.93 0.5138
mode 82 17.98 0.5820
mode 83 18.14 0.3266
mode 84 18.26 0.4313
mode 85 18.33 0.5496
mode 86 18.42 0.5303
mode 87 18.54 0.5599
mode 88 18.65 0.4289
mode 89 18.70 0.5389
mode 90 18.86 0.5120
mode 91 18.90 0.4647
mode 92 18.99 0.4496
mode 93 19.10 0.4965
mode 94 19.17 0.5915
mode 95 19.30 0.4439
mode 96 19.36 0.2048
mode 97 19.47 0.6078
mode 98 19.53 0.5842
mode 99 19.66 0.5290
mode 100 19.70 0.5163
mode 101 19.89 0.5211
mode 102 19.94 0.4580
mode 103 20.01 0.5528
mode 104 20.21 0.5622
mode 105 20.27 0.4689
mode 106 20.29 0.4666

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.