CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  MEMBRANE PROTEIN 26-MAR-24 8YU7  ***

<R2> analysis for 2603191514413998499

---  normal mode 12  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0411
GLU 260.0315
PRO 270.0282
CYS 280.0273
PHE 290.0266
ARG 300.0252
GLU 310.0218
GLU 320.0203
ASN 330.0175
ALA 340.0179
ASN 350.0191
PHE 360.0166
ASN 370.0140
LYS 380.0154
ILE 390.0153
PHE 400.0124
LEU 410.0102
PRO 420.0114
THR 430.0119
ILE 440.0087
TYR 450.0081
SER 460.0108
ILE 470.0110
ILE 480.0086
PHE 490.0094
LEU 500.0126
THR 510.0126
GLY 520.0108
ILE 530.0120
VAL 540.0153
GLY 550.0155
ASN 560.0143
GLY 570.0158
LEU 580.0189
VAL 590.0189
ILE 600.0183
LEU 610.0207
VAL 620.0233
MET 630.0230
GLY 640.0221
TYR 650.0232
GLN 660.0264
LYS 670.0286
LYS 680.0278
LEU 690.0272
ARG 700.0301
SER 710.0289
MET 720.0273
THR 730.0242
ASP 740.0232
LYS 750.0225
TYR 760.0203
ARG 770.0187
LEU 780.0183
HIS 790.0166
LEU 800.0145
SER 810.0140
VAL 820.0129
ALA 830.0108
ASP 840.0094
LEU 850.0098
LEU 860.0076
PHE 870.0059
VAL 880.0067
ILE 890.0070
THR 900.0051
LEU 910.0059
PRO 920.0086
PHE 930.0085
TRP 940.0081
ALA 950.0100
VAL 960.0124
ASP 970.0124
ALA 980.0125
VAL 990.0155
ALA 1000.0178
ASN 1010.0167
TRP 1020.0148
TYR 1030.0167
PHE 1040.0144
GLY 1050.0132
ASN 1060.0130
PHE 1070.0101
LEU 1080.0085
CYS 1090.0100
LYS 1100.0100
ALA 1110.0070
VAL 1120.0064
HIS 1130.0087
VAL 1140.0088
ILE 1150.0070
TYR 1160.0071
THR 1170.0103
VAL 1180.0107
ASN 1190.0096
LEU 1200.0104
TYR 1210.0137
SER 1220.0142
SER 1230.0135
VAL 1240.0155
LEU 1250.0182
ILE 1260.0182
LEU 1270.0184
ALA 1280.0211
PHE 1290.0228
ILE 1300.0227
SER 1310.0239
LEU 1320.0266
ASP 1330.0276
ARG 1340.0278
TYR 1350.0298
LEU 1360.0321
ALA 1370.0325
ILE 1380.0331
VAL 1390.0349
HIS 1400.0371
ALA 1410.0375
THR 1420.0411
ASN 1430.0409
SER 1440.0374
GLN 1450.0361
ARG 1460.0360
PRO 1470.0343
ARG 1480.0317
LYS 1490.0312
LEU 1500.0310
LEU 1510.0290
ALA 1520.0267
GLU 1530.0261
LYS 1540.0263
VAL 1550.0256
VAL 1560.0225
TYR 1570.0213
VAL 1580.0224
GLY 1590.0225
VAL 1600.0192
TRP 1610.0173
ILE 1620.0188
PRO 1630.0191
ALA 1640.0155
LEU 1650.0150
LEU 1660.0180
LEU 1670.0167
THR 1680.0138
ILE 1690.0162
PRO 1700.0171
ASP 1710.0139
PHE 1720.0138
ILE 1730.0172
PHE 1740.0174
ALA 1750.0145
ASN 1760.0157
VAL 1770.0166
SER 1780.0202
GLU 1790.0223
ALA 1800.0251
ASP 1810.0274
ASP 1820.0250
ARG 1830.0222
TYR 1840.0193
ILE 1850.0170
CYS 1860.0141
ASP 1870.0152
ARG 1880.0162
PHE 1890.0198
TYR 1900.0225
PRO 1910.0261
ASN 1920.0270
ASP 1930.0256
LEU 1940.0267
TRP 1950.0241
VAL 1960.0217
VAL 1970.0228
VAL 1980.0235
PHE 1990.0201
GLN 2000.0186
PHE 2010.0208
GLN 2020.0204
HIS 2030.0169
ILE 2040.0174
MET 2050.0203
VAL 2060.0190
GLY 2070.0158
LEU 2080.0167
ILE 2090.0202
LEU 2100.0220
PRO 2110.0206
GLY 2120.0200
ILE 2130.0235
VAL 2140.0247
ILE 2150.0226
LEU 2160.0235
SER 2170.0271
CYS 2180.0274
TYR 2190.0259
CYS 2200.0275
ILE 2210.0308
ILE 2220.0302
ILE 2230.0294
SER 2240.0323
LYS 2250.0345
LEU 2260.0332
SER 2270.0357
HIS 2280.0383
SER 2290.0394
LYS 2300.0364
GLY 2310.0336
HIS 2320.0344
GLN 2330.0330
LYS 2340.0330
ARG 2350.0305
LYS 2360.0286
ALA 2370.0282
LEU 2380.0254
LYS 2390.0232
THR 2400.0215
THR 2410.0210
VAL 2420.0200
ILE 2430.0175
LEU 2440.0162
ILE 2450.0163
LEU 2460.0148
ALA 2470.0121
PHE 2480.0117
PHE 2490.0123
ALA 2500.0101
CYS 2510.0076
TRP 2520.0090
LEU 2530.0108
PRO 2540.0093
TYR 2550.0098
TYR 2560.0128
ILE 2570.0137
GLY 2580.0134
ILE 2590.0150
SER 2600.0176
ILE 2610.0182
ASP 2620.0187
SER 2630.0207
PHE 2640.0227
ILE 2650.0232
LEU 2660.0243
LEU 2670.0271
GLU 2680.0286
ILE 2690.0273
ILE 2700.0248
LYS 2710.0269
GLN 2720.0257
GLY 2730.0264
CYS 2740.0251
GLU 2750.0226
PHE 2760.0204
GLU 2770.0199
ASN 2780.0186
THR 2790.0162
VAL 2800.0152
HIS 2810.0147
LYS 2820.0129
TRP 2830.0108
ILE 2840.0106
SER 2850.0095
ILE 2860.0076
THR 2870.0065
GLU 2880.0063
ALA 2890.0052
LEU 2900.0047
ALA 2910.0057
PHE 2920.0051
PHE 2930.0063
HIS 2940.0079
CYS 2950.0082
CYS 2960.0096
LEU 2970.0110
ASN 2980.0131
PRO 2990.0152
ILE 3000.0155
LEU 3010.0167
TYR 3020.0189
ALA 3030.0202
PHE 3040.0213
LEU 3050.0233

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.