CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  lig_1.pdb  ***

Normal Mode Analysis for ID 2603231525221102422

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.3055
mode 8 1.10 0.2710
mode 9 1.71 0.5932
mode 10 1.86 0.4599
mode 11 2.23 0.7209
mode 12 2.32 0.6847
mode 13 2.44 0.4210
mode 14 2.71 0.5434
mode 15 2.84 0.6025
mode 16 3.23 0.5169
mode 17 3.72 0.4852
mode 18 3.97 0.5745
mode 19 4.06 0.5523
mode 20 4.25 0.5410
mode 21 4.39 0.6632
mode 22 4.49 0.4978
mode 23 4.83 0.5461
mode 24 5.01 0.5618
mode 25 5.23 0.6102
mode 26 5.48 0.7386
mode 27 5.90 0.5681
mode 28 6.07 0.7162
mode 29 6.43 0.4274
mode 30 6.56 0.5775
mode 31 6.70 0.6950
mode 32 6.96 0.5434
mode 33 7.05 0.3649
mode 34 7.34 0.7109
mode 35 7.54 0.5993
mode 36 7.71 0.5813
mode 37 7.78 0.4474
mode 38 7.84 0.6117
mode 39 8.25 0.4651
mode 40 8.30 0.6360
mode 41 8.68 0.5334
mode 42 8.97 0.5133
mode 43 9.04 0.5387
mode 44 9.19 0.4685
mode 45 9.33 0.5261
mode 46 9.54 0.5216
mode 47 9.61 0.5271
mode 48 9.82 0.3351
mode 49 9.99 0.4291
mode 50 10.20 0.5901
mode 51 10.27 0.5393
mode 52 10.58 0.4774
mode 53 10.62 0.4643
mode 54 10.68 0.5712
mode 55 10.93 0.3947
mode 56 11.06 0.5366
mode 57 11.18 0.4762
mode 58 11.40 0.4601
mode 59 11.49 0.3571
mode 60 11.58 0.4927
mode 61 11.64 0.5847
mode 62 11.71 0.5457
mode 63 11.82 0.2922
mode 64 11.99 0.4218
mode 65 12.03 0.4855
mode 66 12.14 0.4275
mode 67 12.26 0.5559
mode 68 12.34 0.5219
mode 69 12.55 0.5246
mode 70 12.57 0.4987
mode 71 12.75 0.3850
mode 72 12.83 0.5175
mode 73 12.91 0.3962
mode 74 13.01 0.2203
mode 75 13.03 0.2556
mode 76 13.08 0.4918
mode 77 13.16 0.4770
mode 78 13.34 0.3510
mode 79 13.40 0.4912
mode 80 13.46 0.5348
mode 81 13.53 0.4530
mode 82 13.61 0.3873
mode 83 13.68 0.4195
mode 84 13.74 0.3400
mode 85 13.87 0.5004
mode 86 13.91 0.3580
mode 87 14.10 0.5359
mode 88 14.21 0.4429
mode 89 14.30 0.4864
mode 90 14.36 0.4296
mode 91 14.48 0.5288
mode 92 14.53 0.4587
mode 93 14.56 0.4600
mode 94 14.62 0.4883
mode 95 14.74 0.4971
mode 96 14.79 0.5015
mode 97 14.85 0.4987
mode 98 14.95 0.6180
mode 99 14.96 0.2961
mode 100 15.05 0.4593
mode 101 15.18 0.5266
mode 102 15.24 0.3495
mode 103 15.28 0.5829
mode 104 15.50 0.5639
mode 105 15.53 0.4634
mode 106 15.53 0.3596

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.