CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  IMMUNE SYSTEM 13-JUL-05 2AAB  ***

Normal Mode Analysis for ID 2603241814171492298

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.7553
mode 8 1.75 0.7347
mode 9 2.48 0.6617
mode 10 2.71 0.6150
mode 11 2.87 0.8072
mode 12 3.36 0.0045
mode 13 3.71 0.6725
mode 14 4.06 0.4608
mode 15 4.41 0.5026
mode 16 4.70 0.4848
mode 17 4.90 0.5013
mode 18 5.33 0.3756
mode 19 5.59 0.5725
mode 20 5.73 0.3648
mode 21 6.15 0.5191
mode 22 6.37 0.3895
mode 23 6.43 0.5315
mode 24 6.62 0.5437
mode 25 6.79 0.5939
mode 26 6.86 0.4213
mode 27 7.16 0.2430
mode 28 7.33 0.3498
mode 29 7.51 0.5789
mode 30 7.64 0.3739
mode 31 7.83 0.3828
mode 32 7.88 0.4742
mode 33 8.01 0.4008
mode 34 8.20 0.0778
mode 35 8.27 0.3112
mode 36 8.39 0.4222
mode 37 8.41 0.3906
mode 38 8.61 0.1217
mode 39 8.64 0.1748
mode 40 8.77 0.2016
mode 41 8.89 0.1340
mode 42 8.99 0.3470
mode 43 9.01 0.1790
mode 44 9.07 0.3072
mode 45 9.26 0.3152
mode 46 9.28 0.3116
mode 47 9.36 0.5445
mode 48 9.51 0.4516
mode 49 9.84 0.1100
mode 50 9.95 0.3199
mode 51 10.04 0.4217
mode 52 10.14 0.3517
mode 53 10.22 0.4025
mode 54 10.40 0.3665
mode 55 10.48 0.3817
mode 56 10.56 0.4260
mode 57 10.62 0.5122
mode 58 10.66 0.4386
mode 59 10.80 0.2958
mode 60 10.89 0.4499
mode 61 11.05 0.4177
mode 62 11.12 0.2869
mode 63 11.15 0.4596
mode 64 11.22 0.3929
mode 65 11.34 0.3107
mode 66 11.42 0.4698
mode 67 11.57 0.3188
mode 68 11.69 0.5287
mode 69 11.80 0.4309
mode 70 11.88 0.3947
mode 71 11.92 0.2395
mode 72 12.04 0.3933
mode 73 12.08 0.4222
mode 74 12.15 0.3867
mode 75 12.20 0.3989
mode 76 12.23 0.2383
mode 77 12.28 0.5796
mode 78 12.43 0.4370
mode 79 12.48 0.2276
mode 80 12.55 0.4483
mode 81 12.65 0.4925
mode 82 12.70 0.4466
mode 83 12.75 0.4037
mode 84 12.86 0.2631
mode 85 12.99 0.4350
mode 86 13.00 0.3158
mode 87 13.04 0.3517
mode 88 13.10 0.2101
mode 89 13.12 0.5225
mode 90 13.27 0.4379
mode 91 13.35 0.3974
mode 92 13.41 0.3098
mode 93 13.46 0.4417
mode 94 13.54 0.4387
mode 95 13.57 0.4094
mode 96 13.65 0.2845
mode 97 13.69 0.4617
mode 98 13.78 0.3708
mode 99 13.80 0.4190
mode 100 13.93 0.4940
mode 101 13.96 0.5044
mode 102 14.05 0.5431
mode 103 14.08 0.3773
mode 104 14.11 0.3772
mode 105 14.17 0.4843
mode 106 14.26 0.4039

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.