CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSFERASE 09-SEP-21 7VEJ  ***

Normal Mode Analysis for ID 260409054632825425

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.7179
mode 8 1.12 0.7640
mode 9 1.37 0.6289
mode 10 2.28 0.8512
mode 11 2.35 0.8073
mode 12 2.71 0.7007
mode 13 3.31 0.5894
mode 14 3.39 0.4980
mode 15 3.57 0.5574
mode 16 3.92 0.5711
mode 17 4.05 0.5703
mode 18 4.67 0.6124
mode 19 5.04 0.3100
mode 20 5.27 0.4013
mode 21 5.28 0.3931
mode 22 5.49 0.3895
mode 23 5.54 0.3800
mode 24 5.56 0.3584
mode 25 6.05 0.6051
mode 26 6.17 0.6206
mode 27 6.44 0.6925
mode 28 6.51 0.6312
mode 29 6.72 0.5769
mode 30 6.84 0.5512
mode 31 6.93 0.5105
mode 32 7.02 0.3387
mode 33 7.09 0.4172
mode 34 7.21 0.4481
mode 35 7.27 0.3495
mode 36 7.41 0.4312
mode 37 7.54 0.2661
mode 38 7.68 0.2428
mode 39 7.70 0.2984
mode 40 7.81 0.2362
mode 41 7.98 0.4682
mode 42 8.14 0.4633
mode 43 8.24 0.4992
mode 44 8.29 0.3629
mode 45 8.31 0.4370
mode 46 8.45 0.3789
mode 47 8.53 0.4574
mode 48 8.60 0.2849
mode 49 8.65 0.2413
mode 50 8.76 0.2915
mode 51 8.81 0.2223
mode 52 8.88 0.3896
mode 53 8.97 0.3391
mode 54 9.09 0.3644
mode 55 9.23 0.1929
mode 56 9.33 0.2646
mode 57 9.35 0.4912
mode 58 9.45 0.5218
mode 59 9.57 0.3435
mode 60 9.61 0.3565
mode 61 9.71 0.3802
mode 62 9.72 0.3996
mode 63 9.75 0.2719
mode 64 9.91 0.3441
mode 65 9.95 0.3744
mode 66 10.03 0.3372
mode 67 10.10 0.3453
mode 68 10.14 0.3685
mode 69 10.20 0.4415
mode 70 10.24 0.3787
mode 71 10.30 0.3393
mode 72 10.38 0.2920
mode 73 10.40 0.4613
mode 74 10.47 0.3598
mode 75 10.56 0.3683
mode 76 10.61 0.4839
mode 77 10.69 0.3283
mode 78 10.76 0.4940
mode 79 10.81 0.4355
mode 80 10.88 0.4551
mode 81 11.05 0.3903
mode 82 11.09 0.4238
mode 83 11.12 0.4873
mode 84 11.19 0.4780
mode 85 11.24 0.4689
mode 86 11.29 0.2680
mode 87 11.36 0.4708
mode 88 11.43 0.4793
mode 89 11.46 0.5095
mode 90 11.47 0.4588
mode 91 11.53 0.4905
mode 92 11.63 0.4880
mode 93 11.68 0.2292
mode 94 11.73 0.4089
mode 95 11.81 0.4537
mode 96 11.85 0.4425
mode 97 11.87 0.4288
mode 98 11.94 0.4053
mode 99 11.95 0.4659
mode 100 12.05 0.2694
mode 101 12.06 0.3146
mode 102 12.13 0.3559
mode 103 12.22 0.4161
mode 104 12.24 0.3463
mode 105 12.27 0.3349
mode 106 12.34 0.4011

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.